Information report for estExt_fgenesh3_pg.C_130097
Gene Details
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Functional Annotation
- Refseq: XP_005846630.1 — hypothetical protein CHLNCDRAFT_58166
- TrEMBL: E1ZHV5 — E1ZHV5_CHLVA; Uncharacterized protein
- STRING: XP_005846630.1 — (Chlorella variabilis)
- GO:0016021 — Cellular Component — integral component of membrane
- GO:0003677 — Molecular Function — DNA binding
- GO:0005515 — Molecular Function — protein binding
- GO:0008270 — Molecular Function — zinc ion binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Actinidia chinensis: Achn214091
- Brachypodium distachyon: Bradi4g01770.1.p
- Solanum lycopersicum: Solyc06g082510.2.1
- Triticum aestivum: Traes_5BL_692FEF87A.3, Traes_7DL_8D627C185.1, Traes_5AL_1FB74A6E1.3
- Zea mays: GRMZM2G024054_P05, GRMZM2G024054_P01, GRMZM2G024054_P02, GRMZM2G163291_P02
Sequences
CDS Sequence:
- >estExt_fgenesh3_pg.C_130097|Chlorella_variabilis_NC64A|MYB_related|estExt_fgenesh3_pg.C_130097
ATGGGGCGCTCTTACAATCATTGGTCGGAGGCGGAGGTGGCGGCGCTCAAGGAGGGAGTGAGGCGCTTTGGTGTGGGCAACTGGCAGAAGATTGTGAATGACTACCCCGTGCTGCGGCATCGCACGGGGGTGCAGTTGAAGGACAAGTACCGAAACATGATCAAGTTCCGCCACCTGGCCATCAACGAAATGGGGGCGTCTCCGCCGCAGCAGCGCCGCTCTAGCTCCTCCAGGGCAGCTGCACAGCGGAGCCCTGCACCCGCCGCCGCTGAGGCCGCGGCCACCGCCGATTCACAGCCGCAAGCAGCCTCGCTTCCGACGCAGCAGCAGGCGGCGGGAGTGGCACGCAGCGCCGGTGCCAGCAGCGCTCAGCGCGCAAAGGAGCAGCAGCAGCCAGCGGCGCCGCCGTTGACAGCGCAGCAGCAGCAGGATCAGCTGGCTGCGGAGCAGGCGGCTACGCAGCAGCGGCTGCAGCAGGCGCAGGCAGCTATCAAGCCGGTGCAGCACGCTTATGTGCAGCAGCTGGCCGCTGCTGCCATCCGCCGGGCAGCGGCAGCGGCGGCGATGGATGAAGCAGCAGCAGTAGCAGCTCCAGGGGCGCAAGCTGATGCGCTGCAGCAGGTTGCACAGTGGCAACAGCAGCAGGCAGAACTGGCTCAGCAGATGCTGCTGGCTGCCAGGCAGGTGTATCTTCAGGTGGCGGAGGAGGTACAGCAGGCGCAGGCGGCAGCAAACGCCGCGGTTTCAGCCGTCCTGCAGGCAGCAGAGACGGCAGCAGATAGCGCACCCCTGAGCGGCATGCTGCCTGGCACGGATGCGCATGTGGCGGCGACGGTAGTGCGGCACTCCAACCGGCGCAAGGCAGCTCTCAACCGCAAGCGCTTCCTGGATGAAGAGGGCGGTGTGGAGGAGCCGCACTCTCGGCCAGTGAGCTCGCAGGGCGGCACGACCGCGGCAGCCTCGGGTGTGGCGCAGATGGATGTGGAGGAGATGGATGGCAGCAGGCCGCCCAGCGCGGCGGGCGGCAAGCGGCGCAGGGTGGGCGCCCAGAAGCGGCTGCACGAGGACACACGCTTCGGTGCGCTGCCTGCCTTGAAGCCCTGCTGCGGCAGCGCTGCCGGCTGGCTGGCTGCAGCTCTGTCTGCTGCTTGCAGCCACGTGTGTGCTGCATCCTGCAGGGGTTCGGCTGGCTGGCTTGCTCTCGCCCTGATGGTGAGCTTCTCAGTTTCTGCCTTCTTCCTGGTGGGGTTTGCAGGCATTTACGATGATCGGCGCTACCGAGCAGGGCCTGCCGGCTCTGGCTCCGAGGCACCACTCGCCCACCGGCGGCGTACCAGTTCGGGCGGTGGCTCCGCGCCCGCACACAGCGACGGCGGCGTGCGAGGGCGGGGTGGCGCCGCCCGCGGGGGCGCGGCGTTGCAGCGCCGTCGCCGCCGCCGCCGCCAGCCTCACCACCTGGCCTCTGAGTTTGGCATCAGCGATGACGACGAGGACGAGGATTTTGAGCTGGATGCTGAGCTGGCAGACGCTGAGCTGGCAGAGGCAGACGAGGCAGAGGAAGAGTGGCAGCGGCAGATCAAACAGGAGCAGCATGACGTGGACTGCTTGTGCGGTGTCAGCTACGACGACGGGGAAGAGATGATTGAGTGTGAGGGGTGCGGCGTGTGGGCCCACATCGCCTGCCTGGCGCGGTATGGCAGGCTGCGGCACAGCGCAGATCGCTACATCTGCAGCCGCTGCCAGGGCGGCTTTGGGAGCCCAATGGCTGCCGGCACGCCCACTGCAGCAGGGGCCCTGTCCCCGCGGGGCGTCGCGGTTGCGCTGGGTGCCAGGCGGCAAGCGTTCCGCAACGACAGCTTCAACAACGACGAGCTCTACGATATTGCTGCCTTCCTGGACAACATGGGGCCCCACCACCGCCTGAAGCTGCAGCGCAGCGGCAGCCTCGGCCCCGGCTCCGCCCGCGCGCGCAGCGCCTCGGCGCAGCAGCTGGCGGCGCTGGGCAGCATGGAGGCGGCGCTGGGCTGCAGCAGCCCCCGCGCAGCGCTGCCGCTCGGGCTGCCGGTGCCGCAGTGGGGTGGCAGCAGGCCGCGGCGGCCGCGCAACCGTCGCAGTGGCAGCGACCTGGGACAGCACCCCTGGCCCTCGGCGGATGTAATGGTGCCAGCACCGCACACCAAGCGGCACCGCCTGCCGCCGCCGCACCCGGGCACCGCCGCAGGCGCGGGCCTGGCGGGGCCGCTGTCTGGCTGGCATCAGATGCCCTCAGCTGTGGCGGCAGGCCTGGCAGCAGCCCACCTCTCGGGCCTCCACCAGCAGTCGCACATGCAGCCGCCTCCTCATCTGCCGCCATTCATGCCGTTTGGCGGGCCGCCGCCCACGCTGGGCGCGGCCACACGCCTTTCGGAGCAGGGGCTGTCGCCCGCAGCCGTCGCCGCCGCCGCCGCGGCTGCTGCTGCTGCGGCGGGCATGACTCTGGGGCGGAGCTGGGGGCAGCAGCCGGATACGTCTTCTGTGGCAGAGCCAGCGGCACATGCACAGCAGGAGAACCAGAAGGCAGCAGCAGTGGCAGAGCTGATGCAGATCATGCAGGGGGCTGGCAGCGGGCTGGGGCTGCCACCGCCGCCAAGGCCATCCCTGCCTGCCGCCACCGCATCGGCGCTGCTCAGCTCGCGGCAGCCCACGCCCTCGCCGCCCATAGACCTCATGCACCGGGACCTGCATGATGTAGACCTGCAGGATGACCTGCATGCCCAGGACTGGCTAGCTGCAGCAGCCTCACTGGCCCGGGCAGACAGCCAGCCCACGTACCCAGCATTTCCAGTGGGGCCCCTGGATGGCGCCAGCGGCAGCCACCACCTGCCCAGCCTTGGTGGCTCGCCCGCCCGCCCGCCCTCGCTCTCCAACGCTGGGGTGCTGCCGCTGCCGCCTCCGCTGGCGCCCATGCTGGGGCTCCAGGAGCAGCACCAGCACTGGATGGCAGTCATGAGCTCGCTTCAACAACAGCAGCAGCAGCAGCGTGTAGGGGCAGGGCGGGGCGAGCCAGCGGCGGCGGCGGCAGGGGCGGCAGCGCCGCACCTTCGCCCGTCCCTGGCCCTGGGCCTGCCCCCGGAGCCGCCCTTTGCTGCGGTGGAGGGCCTGCATGGCCTCACGCCTAGCGCCTCCGCCCGTGCCGACTCGCTCATGAGCGGTGGCAAGCTGGGCACTGCCGCTTCGGCGACCGCTGCAATTTCGCGCATGGCGAGGAAGAGCTTCGAACGCTCCCCGCACGGGGAAATCCTAGCGGCAGCGGCGGCGGCGGTAGGGGGCGCGGGCGGGGACCAGAGAGCGGTGGTAGCAGCGGCGGGCGGGGCCAGCTGGGATCCGCCAGAGTGCTGGAAAAATGCACCAAAGACCAACTAG
Protein Sequence:
- >estExt_fgenesh3_pg.C_130097|Chlorella_variabilis_NC64A|MYB_related|estExt_fgenesh3_pg.C_130097
MGRSYNHWSEAEVAALKEGVRRFGVGNWQKIVNDYPVLRHRTGVQLKDKYRNMIKFRHLAINEMGASPPQQRRSSSSRAAAQRSPAPAAAEAAATADSQPQAASLPTQQQAAGVARSAGASSAQRAKEQQQPAAPPLTAQQQQDQLAAEQAATQQRLQQAQAAIKPVQHAYVQQLAAAAIRRAAAAAAMDEAAAVAAPGAQADALQQVAQWQQQQAELAQQMLLAARQVYLQVAEEVQQAQAAANAAVSAVLQAAETAADSAPLSGMLPGTDAHVAATVVRHSNRRKAALNRKRFLDEEGGVEEPHSRPVSSQGGTTAAASGVAQMDVEEMDGSRPPSAAGGKRRRVGAQKRLHEDTRFGALPALKPCCGSAAGWLAAALSAACSHVCAASCRGSAGWLALALMVSFSVSAFFLVGFAGIYDDRRYRAGPAGSGSEAPLAHRRRTSSGGGSAPAHSDGGVRGRGGAARGGAALQRRRRRRRQPHHLASEFGISDDDEDEDFELDAELADAELAEADEAEEEWQRQIKQEQHDVDCLCGVSYDDGEEMIECEGCGVWAHIACLARYGRLRHSADRYICSRCQGGFGSPMAAGTPTAAGALSPRGVAVALGARRQAFRNDSFNNDELYDIAAFLDNMGPHHRLKLQRSGSLGPGSARARSASAQQLAALGSMEAALGCSSPRAALPLGLPVPQWGGSRPRRPRNRRSGSDLGQHPWPSADVMVPAPHTKRHRLPPPHPGTAAGAGLAGPLSGWHQMPSAVAAGLAAAHLSGLHQQSHMQPPPHLPPFMPFGGPPPTLGAATRLSEQGLSPAAVAAAAAAAAAAAGMTLGRSWGQQPDTSSVAEPAAHAQQENQKAAAVAELMQIMQGAGSGLGLPPPPRPSLPAATASALLSSRQPTPSPPIDLMHRDLHDVDLQDDLHAQDWLAAAASLARADSQPTYPAFPVGPLDGASGSHHLPSLGGSPARPPSLSNAGVLPLPPPLAPMLGLQEQHQHWMAVMSSLQQQQQQQRVGAGRGEPAAAAAGAAAPHLRPSLALGLPPEPPFAAVEGLHGLTPSASARADSLMSGGKLGTAASATAAISRMARKSFERSPHGEILAAAAAAVGGAGGDQRAVVAAAGGASWDPPECWKNAPKTN*