Information report for DCAR_025295
Gene Details
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Functional Annotation
- Refseq: XP_017218447.1 — PREDICTED: telomere repeat-binding protein 4-like
- TrEMBL: A0A161ZPB3 — A0A161ZPB3_DAUCS; Uncharacterized protein
- STRING: VIT_13s0019g01670.t01 — (Vitis vinifera)
- GO:0000781 — Cellular Component — chromosome, telomeric region
- GO:0003691 — Molecular Function — double-stranded telomeric DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Capsicum annuum: CA05g03100
- Nicotiana benthamiana: Niben101Scf01745g03001.1, Niben101Scf00389g00004.1, Niben101Scf04382g00016.1, Niben101Scf03203g04003.1
- Nicotiana tabacum: XP_016488592.1, XP_016497955.1, XP_016481145.1, XP_016500109.1, XP_016500108.1
- Petunia inflata: Peinf101Scf00045g00027.1
- Solanum lycopersicum: Solyc04g011650.2.1
- Solanum melongena: Sme2.5_02745.1_g00002.1
- Solanum tuberosum: PGSC0003DMP400011271
- Vitis vinifera: GSVIVT01016524001
Sequences
CDS Sequence:
- >DCAR_025295|Daucus_carota|MYB_related|DCAR_025295
ATGGTTTTGAAGAAGAGGCAAGAATATGGGTTTCATGGAAACCAAATTCCAGTTGTGCCCACAGGTCCAAGATCTTTAAGGAGGAGGAGGAGTTTTAAAAAGGAATCACTGGACGATGACCAACTTTGTGCATTTGAATTGCTGGCAGCTGTAGCTGGCAAGTTGTTGCGGGAGAGTGAAAGCTCTGCTTCTAGTAATGTTGCAGAAGGAAAAGTGCAACTTGGTATGCACAAGGATGGTATAAAAAAGGAACAAGTTGAAGAAACAGTTGCAAGACCAGAGTGCCTTGATCAGGAAAGCTGTATAGAGAGTGTAATAGTCCCTAAATCAGCAGTTCTAGAGCGCAGTACTAAATCTACTACAAAGGAACTTCCGCTTGTTGGGAACATTTCTGTTTCTGAACATATATCTGTTGTCACAAATTCTAATTTCTTGGACAAAGTTGGTGGTGATGCGAAACATAAGAAATGTACAAGTAAAGCTGCAGCTAGAAGCTTCCTCAGTAAATCAGAAGAGAGCTTCCTTGGTATTGGAAAATTATGTGATGTCAATATAGGTGATAATGCTCAAAGAATGCAGGAGGGGGTAGGGAAACAGAACGGACACTTTAATATGGTCAACTGCGGTGGTTTGGAGGATCCACAGGACTATTATGTGCATAGTACTCATAAACCGATAAATTTCGAGGGTAGCATAAAGTTTCCTTTGTACAGGGATAATGTTCCAGTTGCTTCTTTTCACAAGCATGGGAACAATGTCAAAATAGCTGATAAAGATGATGATGAAAATTACTTTAGGAGTTCTTACCTTAACACCAGGATAAAGGCCTCAAGGCCACAATCACGCTTCGGATATCGAAGAATGAAGAAGTTGATGACATCTAGAAATTGGAGAACAGCACCAAAGTTGATTGATTACGAATTTAATAGCACTGGTAGGGGAGATAGGCCTATCTATCACAAAAGAAAAACTGGAAATGCATATGGAGGATATCAACGTGAGCTACATTCTAAACGGAGGCGGTTGCATGACCGTCGGAAAATGTGTCATTATAGATCAGCAACTGCATATGATCAGCAGGCAAGTAGTGAAAGTATTTCAAACTTTCCTGAGAAAGCCATGAAGGGAGACAATAGTGGGACACCTGCTTTGCATAGAGAAAATGTAGTCTCGTCTTCAGATATTGGTCATAAAGCATCTTTCCATGCCAAAGATACTCGTGTGAAGTTTAGCATCAAATCCTTTAAAGTACCGGAGCTTTATATTGAAGTTCCGGAAACTGCTACTGTAGGTTCACTGAAGATGACTGTCATGAAGGCTGTCAATGCTATACTTGAAGGTGGTTTACACGTCGGAGTAGTTCTTCAAGGGCAGAGAGTTGAAAATGACAACATAACCCTTCGGCAGATTGGTATCTCTCATGATGAGGACCTTGACACTCTAGGTTTCACATTGGAGCCTAATTTGTTACAAGCTACTTCACCTATATCTCGTAAAGATCCCCCAGTTCTGCTACCATGCAACAAACAACAAGATTTATCCAGGTTAGGCAGGTTGCCAGTTCCTGCTCTGGATTCAGGATTCCTTAAGTCCTCGTATGACCCAGTTCCGGTCACTAAATTGGATAATCATGTAGAAAATAATCAGGAAATTGTTCCATATTTTACTGATGTTTTAACAGATGTATCAGTGTCTAAAGCACTGGTTCCTGTTCCCCCAATGAATGTGAACACACTGGCAATTGTCCCGCTAAACCAGAAAGCTAAGAGAACAGACCTTTCGCAGCGCAGAACTAGGAGACCTTTCTCTGTTTCAGAAGTAGAAGCACTAGTTGAAGCAGTTGAGAAACTTGGCACTGGAAGGTGGCGTGATGTTAAAATGCGTTCCTTTGATGATGTAAATCATCGAACTTATGTGGATTTGAAGGATAAATGGAAGACGCTAGTCCATACAGCAAGTATCGCCCCCCAGCAGCGTCGGGGACAGCCTGTACCCCAGGAGCTTTTGGACAGGGTCTTAGCTGCGCATGCTTACTGGTCTCAGCATCAATCCAAGCAACACGGTAAACATCAAATTCAGCCTCTTAAATTTGCTGGAGAGGTTGGAGTCTGA
Protein Sequence:
- >DCAR_025295|Daucus_carota|MYB_related|DCAR_025295
MVLKKRQEYGFHGNQIPVVPTGPRSLRRRRSFKKESLDDDQLCAFELLAAVAGKLLRESESSASSNVAEGKVQLGMHKDGIKKEQVEETVARPECLDQESCIESVIVPKSAVLERSTKSTTKELPLVGNISVSEHISVVTNSNFLDKVGGDAKHKKCTSKAAARSFLSKSEESFLGIGKLCDVNIGDNAQRMQEGVGKQNGHFNMVNCGGLEDPQDYYVHSTHKPINFEGSIKFPLYRDNVPVASFHKHGNNVKIADKDDDENYFRSSYLNTRIKASRPQSRFGYRRMKKLMTSRNWRTAPKLIDYEFNSTGRGDRPIYHKRKTGNAYGGYQRELHSKRRRLHDRRKMCHYRSATAYDQQASSESISNFPEKAMKGDNSGTPALHRENVVSSSDIGHKASFHAKDTRVKFSIKSFKVPELYIEVPETATVGSLKMTVMKAVNAILEGGLHVGVVLQGQRVENDNITLRQIGISHDEDLDTLGFTLEPNLLQATSPISRKDPPVLLPCNKQQDLSRLGRLPVPALDSGFLKSSYDPVPVTKLDNHVENNQEIVPYFTDVLTDVSVSKALVPVPPMNVNTLAIVPLNQKAKRTDLSQRRTRRPFSVSEVEALVEAVEKLGTGRWRDVKMRSFDDVNHRTYVDLKDKWKTLVHTASIAPQQRRGQPVPQELLDRVLAAHAYWSQHQSKQHGKHQIQPLKFAGEVGV*