Information report for DCAR_020474
Gene Details
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Functional Annotation
- Refseq: XP_017258804.1 — PREDICTED: uncharacterized protein LOC108227921 isoform X2
- TrEMBL: A0A164WRU4 — A0A164WRU4_DAUCS; Uncharacterized protein
- GO:0003677 — Molecular Function — DNA binding
- GO:0005515 — Molecular Function — protein binding
- GO:0008270 — Molecular Function — zinc ion binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Beta vulgaris: Bv3_061270_euhf.t1
- Cajanus cajan: C.cajan_24231
- Citrus sinensis: orange1.1g003750m
- Glycine max: Glyma.04G004700.1.p
- Gossypium arboreum: Cotton_A_07810_BGI-A2_v1.0
- Juglans regia: WALNUT_00021724-RA
- Manihot esculenta: Manes.09G026400.1.p
- Ricinus communis: 27810.m000638, 30170.m014226
- Solanum tuberosum: PGSC0003DMP400041042, PGSC0003DMP400041041, PGSC0003DMP400041040
- Vitis vinifera: GSVIVT01033321001
Sequences
CDS Sequence:
- >DCAR_020474|Daucus_carota|MYB_related|DCAR_020474
ATGGAGTCAAAACGACGTCGTAGTGATGCTTTGCTCCCCTGGTTTTTGGCGATTGAAGCCCTCGCCTCTTATCAAACCGATCCATCTTTTCTATTCGATTTAGTGAAAAAGATTCCGGGGGATTGTTCGGAGAATGATGGGAAGAATGCGAGAGAATTGGTGTGCTTGAGGGTTTTAGAGAGTCTATCTGTTCTCGAAAATGGAAAAATGAAAGCGGATTCTGGTGCTCGTATTAGTCCATCGGATTGTTGTGAAGATGTTCTTATACAAGTACTGCTTAAGATTTCGTCAAGAGAAAATCAGGAATTGAGTAAATCTGGAATGTTGAAAGGGGATATCGAGCAATATGTTAAGCGGAAAATATCTTGCTTGCCTAAATGCGGTTTGGAACGGGATGTGCTTTTGAAAGACAGCGATGTGATTCCCTTGTCTGTGAAGGAAAAGAGTGGTTTGTTAAAGAAATATCATTCTGATGGAAATGCAACAAGGGATGAAAGGAGTGACCGTGATGCTTTGTTCCCCTGGTTTTTGGCGATTGAAGCCCTCACCTCTGATCAAACCGATCCATCTTTTCTATTCGATTTAGTGAAAAAGATTCCGAGGGATTGTTCGGAGAATGACGGGAAGAATGCGAGAGAATTGGTGTGCTTGAGGGTTTTAGAGAGTCTATCTGTCCTCGAAAATGGAAAAATTAAAGCGGATTCTAGTGCTCGTATTAGTCCATCGGATTGTGGTGAAGATGTTCTTATACAATCGTCAAGAGAAAATCAGGAATTGAGTAAATCTGAAATGTTGAAAGGGGATATCGAGCAATATGTTAAGCGGAAAATATCTTGCTTGCCTAAATGCGGTTTGGAACAGCTGAAGGATGTGATTTTGAAAGACAGCGATGTGATTCCCTTGTCTGTGAAGGAAAAGAGTGGTTTGTCAAAGAAATATCATTCTGATGGAAATTCAACAAGGGATGAAAGGAGTGACTGTGATGCTTTGGATGATCCTCCTGTTAGGGACTTGCCATCTGGAAAGACTGATGTGAAAGACTCGGGGTATGCTAATCAAGAGGGTTCAACTTCTTTAAATGAGAAATTTCATGTTGACAGTGTTCCTGTAGAAATTGTCCAACATAGTGGCGAAGAAGAGTCAAACTTACTTAGAGAACTTGGGGTGGAAAATTTAAGAGAGACCGTTACTTCTGAGAATGTTGATTCTGATCGTGTTGCATCAAAGAAGCTTAGAATGAGCTTCACTGTCGGTGATGCCCAGCTCTTGCATAATCAACTACAAGGTACTTGTAATGTTGAAAAATTGACTCAAGGTACATCTGGTGAAGAACATGACTTAAACATCATTGCTGGTGAAGCTAAAAATGATGCTGAAGGCTATGTTGAATCAAAAACTGTAGTCAGTTCACCGCGGTTTGTCGATCAAGGAACAAATTCTGTTCATGAAGCCAAAGATAACTGCGATCATAGTTTATCACTGACCCCTAATAGTTTACGATGTGGTGAGATCAGAGCTACAGTGGAGAGTGAACATCAATCCGAAACTTTATCTGATGATGAGATCCTTATAAGAAATACTACATTTTTAAACTCTCAATGTTCACACAGTCAAGATTCCTTGGCTACATTGAATGGAATGAAGCTTTGTATGATATGTAAGATTGGTGGTCAGTTGTTGGTTTGTAGTTCTGGGTCCTGCCAAAGAGTGGTCCATGAGAGATGCATGGGTGTTGCACCCACCTTTGATGTGACAAGGAGGTTTTACTGTCCCTTTTGTGCATATTCACGAGCAATTTCAGAGTACTCAGAGAGCAAAAAGAAGTACTCCTTAGCAAGGAAAACTCTTGTGGCCTTCATTAACCGAGATGAATATCGTCTGAGGAACTCCTCCAGTGTTTTACATAGGGAAGATCAGAATCACTCAAGAGAATCTGAAATTTCAAATAAAAGCATTGAAGAAAACAGGCTTGAGAATGTTGTAAGCAGAGAGATCAAAAATAGTTCCAGAAAAAATACAGGAGACAAACCCTCAATATCCTGTGATTCATCAAGTAGGAAAAGGGCAAGAGCTGTAACTTCTGGAGAAAATGAAGTTGCATTAGAAGTCAAGAGTAATGCAGAAGGCTGCCAATCCTTAAGTGAACAGGAAAAGCAGGTTCCTGTACTAGGTGTCCAGAACAGAGAACCTGAGAGTTCACTGCCTGGAGTGAGTGAACAACTTGGCACAGTCGAAAAGCTTCAGGAATTTTCACATCAGCCAAAAGGTGTCCCCCAAGTAGAAAATAAAGAAGACCTATATTTAGCATCCCAAGCTATCAAGGATAGTGAAGCTTACAGCTCCAAGTCCAAATATTCGGAAATTGCCTATAGGCGTAAGCGACATTCTGGAACTCCAAAGGAGCAGGATGTTTCTAATCAACCAACAGTTTCACCCTGTGAACCTGCAAAGCCAAAGCATTCTGCTGAAGGAAAAAGTTCAGGGGAGAGAAGCGAATCTACTACTCAACACTCCTTAAGAATCCGGAAGCGAAAACAGCAGTACTCATATCCATCAATGCCACATTTGAGGAGGAAGAAAATTCTATGGTCAAATGCCGAGGAAGAGGCACTAAAGGAGGGAGTAAAGAGATTTGCAAGTCATCATGATGGACTAATGCCATGGAAGACGATTTTAGAATTTGGAGGTGATGTTTTCAAGAATCGTACAGCTATAGACCTGAAGGATAAATGGAGGAATATCTCCAAAGCATCTGCAAAAGTATGA
Protein Sequence:
- >DCAR_020474|Daucus_carota|MYB_related|DCAR_020474
MESKRRRSDALLPWFLAIEALASYQTDPSFLFDLVKKIPGDCSENDGKNARELVCLRVLESLSVLENGKMKADSGARISPSDCCEDVLIQVLLKISSRENQELSKSGMLKGDIEQYVKRKISCLPKCGLERDVLLKDSDVIPLSVKEKSGLLKKYHSDGNATRDERSDRDALFPWFLAIEALTSDQTDPSFLFDLVKKIPRDCSENDGKNARELVCLRVLESLSVLENGKIKADSSARISPSDCGEDVLIQSSRENQELSKSEMLKGDIEQYVKRKISCLPKCGLEQLKDVILKDSDVIPLSVKEKSGLSKKYHSDGNSTRDERSDCDALDDPPVRDLPSGKTDVKDSGYANQEGSTSLNEKFHVDSVPVEIVQHSGEEESNLLRELGVENLRETVTSENVDSDRVASKKLRMSFTVGDAQLLHNQLQGTCNVEKLTQGTSGEEHDLNIIAGEAKNDAEGYVESKTVVSSPRFVDQGTNSVHEAKDNCDHSLSLTPNSLRCGEIRATVESEHQSETLSDDEILIRNTTFLNSQCSHSQDSLATLNGMKLCMICKIGGQLLVCSSGSCQRVVHERCMGVAPTFDVTRRFYCPFCAYSRAISEYSESKKKYSLARKTLVAFINRDEYRLRNSSSVLHREDQNHSRESEISNKSIEENRLENVVSREIKNSSRKNTGDKPSISCDSSSRKRARAVTSGENEVALEVKSNAEGCQSLSEQEKQVPVLGVQNREPESSLPGVSEQLGTVEKLQEFSHQPKGVPQVENKEDLYLASQAIKDSEAYSSKSKYSEIAYRRKRHSGTPKEQDVSNQPTVSPCEPAKPKHSAEGKSSGERSESTTQHSLRIRKRKQQYSYPSMPHLRRKKILWSNAEEEALKEGVKRFASHHDGLMPWKTILEFGGDVFKNRTAIDLKDKWRNISKASAKV*