Information report for DCAR_017687
Gene Details
|
|
Functional Annotation
- Refseq: XP_017254152.1 — PREDICTED: TSL-kinase interacting protein 1
- Swissprot: Q8LJT8 — TKI1_ARATH; TSL-kinase interacting protein 1
- TrEMBL: A0A164YFN5 — A0A164YFN5_DAUCS; Uncharacterized protein
- STRING: VIT_08s0040g01460.t01 — (Vitis vinifera)
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Actinidia chinensis: Achn044311
- Cajanus cajan: C.cajan_39931
- Citrus sinensis: orange1.1g003908m, orange1.1g003906m, orange1.1g003904m, orange1.1g003898m
- Fragaria vesca: mrna09621.1-v1.0-hybrid
- Glycine max: Glyma.02G048100.1.p, Glyma.16G128300.1.p
- Manihot esculenta: Manes.09G067200.1.p, Manes.08G009700.5.p, Manes.08G009700.3.p
- Nicotiana benthamiana: Niben101Scf02315g00012.1
- Populus trichocarpa: Potri.016G091700.2, Potri.016G091700.1
- Prunus mume: XP_008243984.1, XP_008243985.1, XP_008243983.1
- Pyrus bretschneideri: Pbr024939.1
- Sesamum indicum: XP_011077326.1
Sequences
CDS Sequence:
- >DCAR_017687|Daucus_carota|MYB_related|DCAR_017687
ATGGAGCTACCGGTTTCGTCGGACTGCGGGGTATATCCCAGTACTAATGATAACCTACTTAAAGACTGCACTTCTGGTGTAACTATGGCCCCAGCTTCTCATGATGTTGCTCCTCAACAGCCAGCAAAACAAACACGACAATGGGCTGCTTGGACACGTCAAGAGGAGGAACGCTTCTTCACTGCACTCCGGCAAGTTGGCAAGAATTTTGAGAAGATAACTCATCGTGTACAAAGTAAAAATAAGGATCAGGTCAGGCATTATTACTATCGACTTGTGAGACGAATGAACAAGTTGTTGGATCCAAAAATTTATCTCGATGCCAGTAACTCTAAAGATACAAATTCTGCGATGCTTCGATGGTGGTCATTACTGGAGAAGAGCAGTTGCAAAGCCTCTAAGCTTCACTTGAAGCCTAGAAGATTTAAGATGTTCCTTGATGCCCTGGAACATCAACTTTTAAAGGACCGACGTAAAAATATAAGAAAACGACATGCTCAGGGAGAAGTTTGTCCTACAACAGCTACAGCAACTGTCCTTAGTCAGGGTGTAAACCGTACCAACTGCAAAGGTGATATGGTTCCTCTGAAAGCAGTGAGGCAGCGACGAAAGCCAGCTTCATATAAAAGGTGGGAAAAGGCTGCCATTGCCGGTGTCTCGCTAGTTGCTGACGCTGCTGAGCATCTGGAACGGACTGCACTGGATGAAATGACTGAGCAAGTTAGAGGGGGAAAATGTGCGGAGCCTGTTGGAAATGTTGTTTCTTCTTCTGCAACTCTGTTGCAGAATCTTTTCGTTGACAACAGTGCACAAACACCATCTAAGCTGAAGCTGCAATTGTTCCCGATTGATGAAAGTACTCGAAAAGCATTGGAAATGGATGATTATAATCCACACTTGGAACTCACTTTAAGTACTCGTAAGAGGATATCATCAGTTTTGGAACATCTAAATCGCAAGTGGGGAATGTCAAGCATAGCTTGTGGAGAATTATTGCTCTTACCTTACTGCGCTCAGAAAGAAAACCTGGTCAATTGTCAGAGATGGACTCAGGACTCTATTCTCAGTGCAGCAGATGTATATAAACAGATTGGTAGCCCTTCAATATTTCGCCTAAGGTACTGCTGGCTCTCCAATGAGCAACATGAATTGTTGGCATGTCAAGCACCTGTAAGCAATTTCAGTGAACAAATAGCGAAAATGAATGGCCCCCAAAAGATGAATATAGTTCCAGATTTCACTCCCGAGCATGTGCCTGGTGATCCATTAGACCTTCGTGGAGATAAAGTAGTCTCAGCTGAGAAGTTTGATGATATGGTTACTTCTAATCTAGATGTTGATGATGATATTGTCGAGTGTATTGACACAAATGTTGATAAGGATATTGTCTTTTCTTCTGAAAATGCTCCTGATATATCTTTACAAAGAGAAAGTTGCAATTTAGCCATCACGAAACAAGCTCAGGAGAAGAATGAGATGCAGTTACAAACTGGTAATTTGCTGACTCCGGGGGATTGGGCTGATAGTCTAACCAACATAAGTATTGGTGATCTTCTCAACGAGGCATCTGATAACATGGAAACCAATTATGTTGGCCCGTCTCATGCCAGTTGTCAGTACCAGGTCTCATTCAGTTGTGATTCTTTTGATGCTGCAATTGCTGCCCTTATGGGTAAAAATCAAGACAAAGCTAGCTTTCAGCCAACTCTGGAGTCCCATGCACCTTCCATTTGGGATGCTGAAGAAACTTGTGATGCCTTCTCCTTTAATAGAAGTTCTGTTTCTCGTGAGAAAGTGTTAGGGGCCTCTACAAATGATTCTTCTGAAGCCTGCAGACAGCAGGCTAAAGAAAGCTTGCTGGCAACAGATATCGTTGATAAGGAATTGTCTGAAATGAAGGAGTTAGATAACGAGGCTCATGGAGACCCAATGGATGAGTTTCAGCCTGATCCAAGTACCATGGAGAGTTCTGCAAAGGAGGATTTTACTGGGCTTTCGGATTTGTGCTGGTCTGAATCATTGGCACCCTTAGATTTGGACAGACCATGTAAATACCACAATGAAGATCTGATCTTAAATGATAGCATGAGTGGGTTGAATCGCCTAATAGCCAGCAGTCTGGATGCATTTCAGAATTGTTCGTTCTTTGGTTTGGATAAAAAAGAATCAGCATCAACATCAGCTGGTGAAGCTCGGAAAAGTGCTACTTTTTCGGATTATAAAATCGGTAGTGAAGTAGAGATATCAAAAGTTTGA
Protein Sequence:
- >DCAR_017687|Daucus_carota|MYB_related|DCAR_017687
MELPVSSDCGVYPSTNDNLLKDCTSGVTMAPASHDVAPQQPAKQTRQWAAWTRQEEERFFTALRQVGKNFEKITHRVQSKNKDQVRHYYYRLVRRMNKLLDPKIYLDASNSKDTNSAMLRWWSLLEKSSCKASKLHLKPRRFKMFLDALEHQLLKDRRKNIRKRHAQGEVCPTTATATVLSQGVNRTNCKGDMVPLKAVRQRRKPASYKRWEKAAIAGVSLVADAAEHLERTALDEMTEQVRGGKCAEPVGNVVSSSATLLQNLFVDNSAQTPSKLKLQLFPIDESTRKALEMDDYNPHLELTLSTRKRISSVLEHLNRKWGMSSIACGELLLLPYCAQKENLVNCQRWTQDSILSAADVYKQIGSPSIFRLRYCWLSNEQHELLACQAPVSNFSEQIAKMNGPQKMNIVPDFTPEHVPGDPLDLRGDKVVSAEKFDDMVTSNLDVDDDIVECIDTNVDKDIVFSSENAPDISLQRESCNLAITKQAQEKNEMQLQTGNLLTPGDWADSLTNISIGDLLNEASDNMETNYVGPSHASCQYQVSFSCDSFDAAIAALMGKNQDKASFQPTLESHAPSIWDAEETCDAFSFNRSSVSREKVLGASTNDSSEACRQQAKESLLATDIVDKELSEMKELDNEAHGDPMDEFQPDPSTMESSAKEDFTGLSDLCWSESLAPLDLDRPCKYHNEDLILNDSMSGLNRLIASSLDAFQNCSFFGLDKKESASTSAGEARKSATFSDYKIGSEVEISKV*