Information report for DCAR_005963
Gene Details
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Functional Annotation
- Refseq: XP_017232104.1 — PREDICTED: telomere repeat-binding protein 5
- Refseq: XP_017232106.1 — PREDICTED: telomere repeat-binding protein 5
- Swissprot: Q6R0E3 — TRP5_ARATH; Telomere repeat-binding protein 5
- TrEMBL: A0A166DDE4 — A0A166DDE4_DAUCS; Uncharacterized protein
- STRING: VIT_06s0004g04940.t01 — (Vitis vinifera)
- GO:0003677 — Molecular Function — DNA binding
- GO:0005515 — Molecular Function — protein binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Actinidia chinensis: Achn108091
- Citrus sinensis: orange1.1g042386m
- Manihot esculenta: Manes.01G172100.2.p, Manes.02G131200.1.p
- Populus trichocarpa: Potri.009G032000.1, Potri.001G241600.1, Potri.009G032000.4, Potri.009G032000.2, Potri.009G032000.3
- Sesamum indicum: XP_011089488.1, XP_011089486.1
- Solanum lycopersicum: Solyc06g005590.2.1
- Solanum tuberosum: PGSC0003DMP400003825
- Vitis vinifera: GSVIVT01024936001
- Ziziphus jujuba: XP_015874013.1
Sequences
CDS Sequence:
- >DCAR_005963|Daucus_carota|MYB_related|DCAR_005963
ATGCTGCATAAGAGGTTAAACCATGGACTTTATGGCTATGAGGTACCTCCAATTCCCCGAGCCGCCAGATCCGCCAGGAGGAGGGTACCTTATAGAAAGAAATCTGATGATGATCAAATGTGTGCGTTTGACTTGTTGGCTACTGTTGCTGGCAAGTTGCTAGAGGGAGAAAATAGTCCTAGTGCTGCTGAGTTGTTAAATGGAGTAGATAAAAGTGCAGTTGGGGCAGATTCACTCAAGAAGGAAAAAGTGGTGAAAGATAATCCTGAGAAATTGATCCCTTGTATTGAAGAAAAACGTGGTAGGAATTTTTTTGTCTCTGAGATAATATCACAAGCTCCAAAACATACTATAAAGGAAGTGTCACATGCTCAGAATGATGCTTGTTCAGCATTTGCATCTGTTATAACTACTTCTGATGGCTCAGATATGTTTGGCACTGCTGCAAAGTTGGTTGATGATCAAAGCAAGAATGGACGTCGAAACTTTTCCAAGTTAGACATGGAGCGCTGTGGAAGTACCATCTCCTTTTCTAGATTAGATGATGAAAATAAGAATTGTATCAAAATTGAACCAGCGATGACTGGAAAAGAGCCCTGTAATGCTAGGGCTGATACATGTTGTATAAAAGATCTGACTGTGCAGGACTTAGAACCTCATGCACTAGGTAATGCTGACAATAGGTGCAAGTTTCCTGTCAAGCCTTCTGTTCTGGATGAAGGCTTAAAGAAGGGTATCTGTAGGGATCAAGGTCCTCGTGGTTCTTTCCCAACCTGTAAGGATAATGTAAAGTTAGTTGTTAGAGATGGTGACGAAAACTCTTCTTGGTGCACTACACCTAGAAAACTCAATAAGGCCTTCAGGCCACCGGCTCGAATGGGTGACAGAAGAATTAAAAGATTACTGGCATCCCGATATTGGAAAGCACCTCCGAAATTGAGCAATGAGGATTGCTTCAACATTGGATTAGAAACAAAACCAGTGTACCAGAACAAGGCAAATGGTTATAAACGCCAGAGGTCTTTGAGGGACTATCCTATTAAAAAGAGGAGACTCTATGGCCATAGCTTTGAAACAAATGCCTATGAAATGGTTAACAACAACGACACATCTTTTTCACCTGGGAAGGGTTACAGTGAAAATGCTTCTGGTTCGGTCCCTACCATGCATGAAGCAAAGGGAGTTTCAACTTTTGCAACAAGTCAGCAAAATTGCTTTCAGCCACGTGATTCTCATGTGAAGCTAAAGATCAAGTCTTTTAGGGTTCCAGAGCTATTTTTTGAGATTCCAGAGACCGCAACTGTTGGTTCTCTGAAGAGAACAGTTATGGAGGCAGTTAACTCTGTACTTGGTGGTGGACTTCGTGTTGGTGTACTTTTTCAAGGGAAGAAAATCAGGGATGATAACAAAACCCTGGTGCAGACTGGGATATATGATAATAACAAAAACGATTCTCTGGGTTTTACCCTGGAGCCTCTGTGTTCACAGGTATCCCCAACTCAATACCCTGAAGATCATGCACTTACACCTGCTCGACAGATAACAAGGTGCCCACATACTGGGCTCATAGTCAAACAGGGGAATTCTGATGTTCCACCTGACCTTCCCTCAACAAATTTTAGCAACATAATTGAGAGTGATCATGATTCAGCGCCCTCTCCTCCAGACGTGTCAATAGACAAATGCCTGGCTGATTCAAAAGCTTTGGTTGCCACTCCAGAAATGAATGTTGAACCGCTATCTGCAATTTCCATGCGGAAATCCAAGAGATTAGATGTTGGTCAACGCAGAATCCGTAGGCCCTTTTCTGTTTCAGAAGTGGAAGCATTGGTGCAAGCTGTTGAGAAACTAGGAACTGGAAGATGGCGTGATGTTAAAATGCGAGCTTTTGACAATGCTAAACACAGAACATATGTGGATTTGAAGGACAAGTGGAAAACGTTGGTACATACAGCAAGAATATCTCCCCAGCAGAGAAGAGGAGAACCCGTGCCTCAGGAACTCCTAGATAGGGTCCTGGCGGCTCATGCATTTTGGTCACAGCAGCAAGCCAAGCAACAACTGAAGCAACATTCGGAGGCTTGCCTCCTCTTTTGA
Protein Sequence:
- >DCAR_005963|Daucus_carota|MYB_related|DCAR_005963
MLHKRLNHGLYGYEVPPIPRAARSARRRVPYRKKSDDDQMCAFDLLATVAGKLLEGENSPSAAELLNGVDKSAVGADSLKKEKVVKDNPEKLIPCIEEKRGRNFFVSEIISQAPKHTIKEVSHAQNDACSAFASVITTSDGSDMFGTAAKLVDDQSKNGRRNFSKLDMERCGSTISFSRLDDENKNCIKIEPAMTGKEPCNARADTCCIKDLTVQDLEPHALGNADNRCKFPVKPSVLDEGLKKGICRDQGPRGSFPTCKDNVKLVVRDGDENSSWCTTPRKLNKAFRPPARMGDRRIKRLLASRYWKAPPKLSNEDCFNIGLETKPVYQNKANGYKRQRSLRDYPIKKRRLYGHSFETNAYEMVNNNDTSFSPGKGYSENASGSVPTMHEAKGVSTFATSQQNCFQPRDSHVKLKIKSFRVPELFFEIPETATVGSLKRTVMEAVNSVLGGGLRVGVLFQGKKIRDDNKTLVQTGIYDNNKNDSLGFTLEPLCSQVSPTQYPEDHALTPARQITRCPHTGLIVKQGNSDVPPDLPSTNFSNIIESDHDSAPSPPDVSIDKCLADSKALVATPEMNVEPLSAISMRKSKRLDVGQRRIRRPFSVSEVEALVQAVEKLGTGRWRDVKMRAFDNAKHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAFWSQQQAKQQLKQHSEACLLF*