Information report for Ciclev10027902m
Gene Details
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Functional Annotation
- Refseq: XP_006423358.1 — uncharacterized protein LOC18035195 isoform X1
- TrEMBL: V4S826 — V4S826_9ROSI; Uncharacterized protein
- STRING: XP_006423357.1 — (Citrus clementina)
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Citrus sinensis: orange1.1g005589m
- Manihot esculenta: Manes.11G084700.2.p, Manes.11G084700.1.p, Manes.11G084700.4.p, Manes.11G084700.3.p, Manes.11G084700.6.p, Manes.11G084700.5.p, Manes.11G084700.8.p, Manes.11G084700.7.p
- Prunus persica: Prupe.8G091800.9.p, Prupe.8G091800.7.p, Prupe.8G091800.5.p, Prupe.8G091800.4.p, Prupe.8G091800.2.p, Prupe.8G091800.8.p, Prupe.8G091800.6.p, Prupe.8G091800.3.p, Prupe.8G091800.1.p
- Ricinus communis: 30131.m007077
- Sesamum indicum: XP_011093304.1
- Vitis vinifera: GSVIVT01023816001
- Ziziphus jujuba: XP_015892528.1, XP_015892526.1
Sequences
CDS Sequence:
- >Ciclev10027902m|Citrus_clementina|MYB_related|Ciclev10027902m
ATGGATTTGGATACTGACCTTTTTGCTGATGAATCTGGACCTGCAGTAAACCATGTACGTGGTAGGTTTCAACCCAAAGCCAAACCAAGACCTAGAAACGAAAGAACTGCATCTGTTGACGTTATAGATAAAGATAGCCAATTGTTGGATCCTGTTGTTTCTTCTGTACCGGCCTCGGAAGTTGTCAGGACAGTTGAGCACTTTAAAGAAAATGAGAGCTCTGAGAATGCTCTGCATTCTGAGGTCACGGCCTCTGATGGCTGTGGAGACTTGCTCTCTTCCTTTCAGAAGGCAGCTGGGCAGAATGCAGATGTACTTTCTGGTTTGGAATCTCTCAATGATTTTCAAAGTCAATCTTCAAATGGAACAGAGATGCCAGCTCTTATTGTTTCCGACTACAACGGAGGCGAAGCTGTTGTCTTTGAAGGTCTGAGCTCTGACAACAATGCAGCACCTGGAGTATGCGATGCCGCACAAGCTGAAACTTCTGCTGATATGTTCTTGACCCAAGATCCAATATCCTGTGGGCAGGCAGCTCTTACAAATAATGCTGGAGGTATTCCTGTTGATGATGCAAGGCTAGAAAGAGAGGTTCAGCAAGACGGGGCCTTTCCTGACTTGAATTTTCTAGATTCTACTTCGGAGGAAGCTGTTGCATCTGGACAACGTGCCGCAAAATACAAACCCAGGCCGCAGGTGCGAACCGAGAGCGAGAAGTTTAATATTAGTAGTGTGCCTCATCCTGATGCTGTTGAATCTGTTATGCATTCGCCAAATGCTCAGTTTGTTTCTTCTGGATCTCAGTTCATGTCTGAGGGTTCAATTCCTGCCTCTGTACCTGAGGATTGTTTTGATTACTCATCTATAGACTTGGATGGTACTACTCCCCCAGATCCTACTTCCTCTGAGTTCCCAGTGAATGAAGAACTGACAAATTTTGCAGAAACATCTTTCACAGATGCTGCCGCTTCTGGGGACATGCAACATGAAGATTTTCCAGCAACAACTGAAAGCCAGAGTGCTATGGGTAAGGAAACAAAAGCATCAACTGTGCTAAGTCTTTCTCAGAGGTTGATTGAATCTTCACAGGCTGGTAAGGAGACTGAAGTTGGTAAATTATTAAGACAGTTGAGAAAGGGAGTAGTTGTTCCCGAACTTGTTGATGAGCCTGACAATGAGGCCCGTAATGATGGAAGCTTCAGTGCTGAACCTCCAAGTAATGCTGTAGATGAAGATGAAGGTGATGTTGGCGGAAATAGTGCAGAAAAGACGTCTGAGAAGAAAAGAGCACCAAGAAAGTCGAAGGAAACCGTGTCTGAAAATGGAAAGACGGTTCGAAAGCGTAAAAAAGCCAATGAAGCATCAGATACAGACAAAAATCCTCCAAAGAAGTTCTCTCATTCAACTCGTCGGAAGAGAAGGATTGTGAATAAGGAATTGCTTCAAACGCCAGAGGATGAAATTGATCCTCAGAAGGTGCCTATGAAGGATCTTATTCTGTTGGCAGAGTATAAGGAGCGGTTAGCGAGTAAAGAGGCAAAAGCAACGGGAACCCCCTTGAAAAATCAAAGTGCTGAACATTCATCCCGTGAGGAAGATTATCATAATGAGGATGAGACCTTTGCTTCAGAACAAGACAATGGCTCCTTTGGTGATCCAGCTACTGATAGGGTTCAGCCAAGAGTTCATTTCTTCAATTATCAGTCTTTCATGAAGAAAACACCCACTGTACGATGGTCGAAGCAAGAAACAGAATTGTTTTATGAGGCCATTCGGCAGTTTGGTACAGATCTGTCAATGATCCAACAACTTTTCCCTGGAAGAACACGCCAACAAGTCAAATTAAAATATAAAAAGGAAGAGCGTGAACACCCGTTGAGGTTAACTGAAGCTCTAACGAATCGTGCCAAAGATCATTCCCATTTTGAAAAGGTGATTGAGCAGCTGCAACAGTTTGCTGCTCAAGCAGCACAGGATGCAAAAGAAGATGATTCAGCTAGCATGATAGACGAGGATTTGGAGGAGTTGAATCCCCAGTATAATGATAAAGCGGAAAAAGTTGAGCAAGATCAAAATGCAGAAGCAGATGTTAATGAAGTCCACAGTCCAATGAAGGATGATGAAAACGCCGACGACTACGACGACATATGGAATTCATATAAAAGTGAATTTTAG
Protein Sequence:
- >Ciclev10027902m|Citrus_clementina|MYB_related|Ciclev10027902m
MDLDTDLFADESGPAVNHVRGRFQPKAKPRPRNERTASVDVIDKDSQLLDPVVSSVPASEVVRTVEHFKENESSENALHSEVTASDGCGDLLSSFQKAAGQNADVLSGLESLNDFQSQSSNGTEMPALIVSDYNGGEAVVFEGLSSDNNAAPGVCDAAQAETSADMFLTQDPISCGQAALTNNAGGIPVDDARLEREVQQDGAFPDLNFLDSTSEEAVASGQRAAKYKPRPQVRTESEKFNISSVPHPDAVESVMHSPNAQFVSSGSQFMSEGSIPASVPEDCFDYSSIDLDGTTPPDPTSSEFPVNEELTNFAETSFTDAAASGDMQHEDFPATTESQSAMGKETKASTVLSLSQRLIESSQAGKETEVGKLLRQLRKGVVVPELVDEPDNEARNDGSFSAEPPSNAVDEDEGDVGGNSAEKTSEKKRAPRKSKETVSENGKTVRKRKKANEASDTDKNPPKKFSHSTRRKRRIVNKELLQTPEDEIDPQKVPMKDLILLAEYKERLASKEAKATGTPLKNQSAEHSSREEDYHNEDETFASEQDNGSFGDPATDRVQPRVHFFNYQSFMKKTPTVRWSKQETELFYEAIRQFGTDLSMIQQLFPGRTRQQVKLKYKKEEREHPLRLTEALTNRAKDHSHFEKVIEQLQQFAAQAAQDAKEDDSASMIDEDLEELNPQYNDKAEKVEQDQNAEADVNEVHSPMKDDENADDYDDIWNSYKSEF*