Information report for Ciclev10011099m
Gene Details
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Functional Annotation
- Refseq: XP_006428404.1 — TSL-kinase interacting protein 1 isoform X4
- Refseq: XP_015380958.1 — TSL-kinase interacting protein 1 isoform X4
- Swissprot: Q8LJT8 — TKI1_ARATH; TSL-kinase interacting protein 1
- TrEMBL: V4UQ81 — V4UQ81_9ROSI; Uncharacterized protein
- STRING: XP_006428399.1 — (Citrus clementina)
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Citrus sinensis: orange1.1g003908m, orange1.1g003906m, orange1.1g003904m, orange1.1g003898m
- Manihot esculenta: Manes.08G009700.4.p, Manes.08G009700.2.p, Manes.08G009700.1.p, Manes.08G009700.5.p, Manes.08G009700.3.p, Manes.09G067200.1.p
- Populus trichocarpa: Potri.016G091700.2, Potri.016G091700.1, Potri.006G125400.2, Potri.006G125400.1, Potri.006G125400.3
- Prunus mume: XP_008243983.1, XP_008243984.1, XP_008243985.1
- Prunus persica: Prupe.6G232900.1.p
- Pyrus bretschneideri: Pbr024939.1
Sequences
CDS Sequence:
- >Ciclev10011099m|Citrus_clementina|MYB_related|Ciclev10011099m
ATGCAGATGGAATCACAGTTGTCCATGAACTCCGAGGTGCATCTTCATCCTAGGAATACTCCAGTTCAGGATGAAGACCCTCGTGTAGTAGCCTCATCTACCCTCGATAATGTTATTCTGCAGCAGTCTGCTAAAAGGCCTACACGGCAATGGGCTGCTTGGACACGGGAAGAGGAGGAAAGCTTTTTCACTGCATTGCGACAAGTTGGCAAGAATTTTGAGAAGATCACTCATCGAGTCCGAAGCAAAAACAAGGATCAGGTCCGACATTATTATTATCGTCTGGTGAGGCGGATGAACAAGCTGCTGGGTCCAGGATTATGTCTGGATGCAAAAAACTCTAAAGATACCAATGCTGCAATGCTTCGATGGTGGTCTTTACTGGAAAAGTATAGCTGCAAAGCCTCAAAGCTTCACCTGAAGCCCCGAAGGTTCAAGATATTTGTAGAAGCCTTGGAGCATCAACTCCTGAAAGATAGGAAGAGAAGTGTTAGAAAGCGACCTTCTCAAAGGGACAGCTATTCACCTACAGCTCCAACCCCCATTCCAAATCAGAGTAGAACATCAGGACAGGATACTTGCACAGTAAAATTAGTTCTTGTTGATAGTCAAAACATACAAAAATTAGGGCCTGCAAAAGGATCTTTGAAGCGCAATGTTAACATAGGTATTAATCGTAGCAACAATAAGGCAGACTCTGCTACTCTGAAACCTAGGCAACGACGGAAACCAGATAGCATCTCATCAGCTGCATATAAAAAATGGGAAAAGGCTGCTATTGCTGGGGTTTCTTTGGTTGCTGATGCTGCTGAGCATTTAGAACGAACATCCACTGATAAAGAAGTTGAACGTCAGCAAGAGCACACAGCTCTTGAAACTGCTGATAAAGTTCTTCCCCCTTTGCCCACTATTTCACCAACTCTTTTTGCTGAGGGCAATGTACAAACTCCTGTGAAACTTAAGCTCCAGCTGTATCCAATTGATGATGGTACTCGAAAAGCCCTAGAAATGGATAACCATAATCCACACCTGGAGCTCACTCTTAGTACAAGGAAAAAGATATCATCAGTACTTGAACATTTAAATCGCAAATGGGGCAATGCAAGTGTCGCATCTGGAGAGCTAATGCTTTTTCCTTATGGTGCTCAAAGGGAAAATCTGGTGGGTTATCAGAGATGGACCCAGGACTCCGTTTTTAGTGCAGCAGATGTATATGCAATGATCGGAAGCCCTCCAATGTTCCGCTTGAGGTATGGTTGGTTTTCTGATACTGAACTTGGGTATGTAGCACCACATGCTCCTTCAGCATCCGGCTGTGTTCCTAGCTTCCATAATATAAATGTGGAAAATAAGAAGGAGCAGATTGTTGATTCAGTGCCCGGACGTGTGCCATCTACCAGTGATCAGTCTGAGAATTTTGTGGATCCCTATAAAAAACTAACATCAGTTAAAGAAAACGACACATTTGCAACTTCTTCAAGTAGTATGCCTAAGGAGACGAGTAGTTACATCAGCACTTCCAAATGTGATATTGCAGACACATCTGATCCTGCAGCAAATGTATCATGGCCCAGGAAGGAGACTGGTAATGAGATTATTACCGGACAAGCGGAAGATATGGGTGACGAGAGGTTAAGCAGTGGTACTGCACTGTCAGCAGGGGAGTGGGCAGATAGTCTCACCAACATAAGTGTTGGAGATCTGCTCGCTGAGGTGCCTCATGATTTGGATGCTGCACCTGTTGCTGAAAGTTCTCAATGTCTTCAGCAAATCCCGTTCAGCTGTGATTCATTTGATGCTGCCATCGCTGCTCATATATCTAGACATCAAAACAAGATGGGAGCCTTATCAACCTTGGCATCCCATGCTTCTTCCATCTGGGATGCTGAAGAAACATGTGATGCATTCTCATTTCAAAAAAATCCAGTTCTTTGTAATGGGGTTTCCAGATTGCCTGACATTGCTCCTCCAGCAGCAGACTGTGAGCAGATTGCAAGAACAAATTCGGTGGGTTCTGGTGGCTTTTTCGAGGAGTTACTTGATGCTGAGGGCCCTACTGACTACCCTGCGCATGAAGACCCTATGGATGATTGTCTCCGCAATCCCCACACTTTGGATAATTCTGTAAATGACTTCAATGGGCTAACAGATATATATTGGCCCGACTCTTTAGGACCATTAGATTTGGACATACCATCCTCTAAATATCGTGGTGAAGATATAATTCTTAGTGATAGCCTTGGAGGTCTGAACCGTCTTATTGCCAGTAGTCTTGATGCATTTCAAAATTGCTCATTCTTTGGGTTGGACAAGAAAGAACCGACACCAACAGTTGAAGCTGGAGAAACTGCCTCTTTTTCGGATTTTAAAATTGGCAGTCAGGGTTGA
Protein Sequence:
- >Ciclev10011099m|Citrus_clementina|MYB_related|Ciclev10011099m
MQMESQLSMNSEVHLHPRNTPVQDEDPRVVASSTLDNVILQQSAKRPTRQWAAWTREEEESFFTALRQVGKNFEKITHRVRSKNKDQVRHYYYRLVRRMNKLLGPGLCLDAKNSKDTNAAMLRWWSLLEKYSCKASKLHLKPRRFKIFVEALEHQLLKDRKRSVRKRPSQRDSYSPTAPTPIPNQSRTSGQDTCTVKLVLVDSQNIQKLGPAKGSLKRNVNIGINRSNNKADSATLKPRQRRKPDSISSAAYKKWEKAAIAGVSLVADAAEHLERTSTDKEVERQQEHTALETADKVLPPLPTISPTLFAEGNVQTPVKLKLQLYPIDDGTRKALEMDNHNPHLELTLSTRKKISSVLEHLNRKWGNASVASGELMLFPYGAQRENLVGYQRWTQDSVFSAADVYAMIGSPPMFRLRYGWFSDTELGYVAPHAPSASGCVPSFHNINVENKKEQIVDSVPGRVPSTSDQSENFVDPYKKLTSVKENDTFATSSSSMPKETSSYISTSKCDIADTSDPAANVSWPRKETGNEIITGQAEDMGDERLSSGTALSAGEWADSLTNISVGDLLAEVPHDLDAAPVAESSQCLQQIPFSCDSFDAAIAAHISRHQNKMGALSTLASHASSIWDAEETCDAFSFQKNPVLCNGVSRLPDIAPPAADCEQIARTNSVGSGGFFEELLDAEGPTDYPAHEDPMDDCLRNPHTLDNSVNDFNGLTDIYWPDSLGPLDLDIPSSKYRGEDIILSDSLGGLNRLIASSLDAFQNCSFFGLDKKEPTPTVEAGETASFSDFKIGSQG*