Information report for Ciclev10000076m
Gene Details
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Functional Annotation
- Refseq: XP_006433343.1 — protein ALWAYS EARLY 2 isoform X3
- TrEMBL: V4TAE8 — V4TAE8_9ROSI; Uncharacterized protein
- STRING: XP_006433342.1 — (Citrus clementina)
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Citrus sinensis: orange1.1g044351m
- Prunus mume: XP_008246393.1, XP_008246392.1, XP_008246391.1, XP_008246389.1, XP_008246395.1, XP_008246394.1
- Prunus persica: Prupe.6G323800.3.p, Prupe.6G323800.6.p, Prupe.6G323800.5.p, Prupe.6G323800.1.p, Prupe.6G323800.2.p, Prupe.6G323800.4.p
- Pyrus bretschneideri: Pbr020438.1, Pbr020410.1
- Ziziphus jujuba: XP_015875086.1, XP_015875085.1, XP_015875084.1, XP_015875083.1
Sequences
CDS Sequence:
- >Ciclev10000076m|Citrus_clementina|MYB_related|Ciclev10000076m
ATGGCTCCTACGAGAAAATCTAGAAGTGTGAATAAGCGATACGCAAATGAGGTCTCTCCCGCTAAGGATGTCATCAGTCCAAGCAAAAGCAAGCAAAAGAAGAAATTGTCGGATAAGTTAGGACCTCAATGGAGCAAGGGGGAGCTTCAGCGTTTTTATGAAGCCTACCGAAACTATGGGAAAGATTGGAAGAAGGTGGCTGCTCAAGTTCGTAATAGATCTGCGGAAATGGTAGAGGCCCTCTACAATATGAACCGGGCATACTTATCCCTGCCGGAGGGAACTGCATCCGTGGTTGGCCTTATTGCCATGATGACTGATCACTATAATGTCATGGAAGGAAGTGATAGTGAAAGAGAGAGCAATGATGCTTCTGAAATGCCACGAAAATCCCAGAAACGCAAGCGGGCAAAAGTTCAGCTTAGTGCCTCGAAGGAAGATATATCTCAGTCCTGGTCAATGGCTGCAACCGGTGGATGTCTATCATTGTTGAAGAGATCACGTATTGATGGTAATCAGCCTCGTGCGGTTAAGAAAAGGACACCTCGCTTCCCTGTTTCATATTCACAAAAGAAAGATGATAGAGATGATTATATTCCCCTGAACAAAAAAGATCGGAGGTCAGCTGTTGATGCTAATGACGATGAGGTCGCGCATGTTGCAGCATTGGCGTTAACTGAGGCATCACAAAGGGGAGGATCTCCCCAAGTTTCTCAGAGCCCGCATAAAAAAACTGAGCATGGAAAATCCTCACCAGTCCAGATCTGGGATAAAATGTTCCCACCAGCAGAGACAGCTCATCCGGATGCCCGTGAAGCTCTAAACGAAGAAGGCTGCCCTGAAGCAAGAATCCTAAACAGGAGACCTGAAAATGGAGCTTATACTAGAGCTAGAAAATCCTTGATGGATATGGAAGGTGTAGGTACTGTTGAGGTTCACCAAAAAGGGAAAAAGTTTTACAGGAAGAAAATGAAAGTTGAAGAGGTCAGAAACAGTCTGTCTGATGATGAGGGAGAAGCGTGTAGTGGAACTGAAGAAGGTCTGAGTTCTCGTAAAGGGAAAGTTGGCAGTGAGATTTCAAATGCAAAAAATGATCATCTCCCTCTGCAGATGCAGAGGAAGAGAAGCAAGAAGCTTTTCTTTGGAGATGAGAGCACTGCCTTAAATGCTTTACAAACATTGGCTGATTTGTCTTTGATGCTTCCAGACTCTACCATGGAATCTGAATCATCTGTGCAGTTGAAGGAAGAACGAACTGCATTTGATATAGATGACAAGTCTAGTGCACCTGAGGAAACATCTACAAGTCATCCCAAAGAGAAAATTAAACATTTAGGGCCAAAAGAGAAGGCACTGAATACAATAACTGAAGCTGAGGATATTATCCCTAGGAAGTCTAAACTTGGGAGATACTCGGGCAATGATGTTGAAACTGTTGCAGAAGTGAAAGAACAGCCTGAGCCTCCAAATAGTATGTCGAAAAGGAAACGGAAACCTGTTCTCTCAAAGAAGATATCAAATTCTGAAGCTCTGACGGATACCCATATGACAAGAACTTTGGAGAGTGAGGCCTTAGCTGAAGAACATAATAAATTTGCCAGTAAAGGTAAACGTACCAGTCAAAATTCTGCTCAATCCAAACAATGGAAGCCAGGGCGAGTGTTGGAAGGTTCTTCTGTTAATGACCAGAACAGAGCAAGTATCGATTTGGTGGCACCAACTGCACAAGCTCCTGTTGCTAGCCCAGCTAGCTTACCTACCAAACATCAAAGTAGACGTAAGATGGATTTAAAGAGAAAATTGAGCTCAAAAGAGATGAAGTTTTCTGAGAATAGTTTAAAAACCCAACCTAACAAAAACTCTCTCTCACAGGAAGACAGACTGCTCTCCGTGAAGGAGAAGCTTTCTGGTTGTCTGTCATCTAATATGGTGCGTAGATGGTGCACTTTTGAGTGGTTCTACAGTGCAATTGATTACCCCTGGTTTTCTAACCGGGAGTTTGTGGAGTACTTAAATCATGTTGGACTTGGGCACATCCCAAGGCTTACTCGTGTTGAATGGGGTGTCATAAGAAGTTCCCTTGGCAAACCTCGAAGGCTTTCTAAACGCTTTCTACACGATGAAAGAGAGAAACTTAAACAATATCGAGAATCTGTGAGAAAACATTATGCTGAACTCCGCACTGGTGTAAGGGAAGGACTTCCAAGAGATTTACCACGGCCTTTATCTGTTGGACAGAGAGTGATTGCTATTCATCCCAAAACAAGGGAATTGCATGATGGGAGTGTACTCACAATTGATCATGATAAGTGTAGGGTTCAGTTCGACCGTCCTGAGTTAGGAGTTGAATTTGTCATGGATATTGATAGCATGCCTTCAAATCCACTGGATAACATGCCAGAAGCTCTTAGAAGACAGATCAGTGCTGATAAGTTCTCAGCAATATCTAAAGAATTGCAAGTGAATGGTCATCCTAATTTCGGTTCCCCCATGTTATTTGCTTCTGATGGGCATCTGGAGAAAGCACCAATTCTCCCAAATACCTTACAAAAGCAGGCAAAGGGGGATATGAACCATGCTCTTCCACAAGCAAAATCATTGGCCACTGACATCGTTAGTGCACAGCAGGCAGCCTATGGTCAACTTTGTACGGTGCCACAGATCCAAGCAAGAGAAGCTACAGTACGGGCTCTTTCTGAGGAAGCGCTGTTAATGGAGCTTAAGAACACTAACAATGATATATTGGAAAGCCAAAATGGTGGAGAAAGCTCTTTAAAAGATTCCGAACCTCTCAAGAAGCATATCGCTACGGCTTCTTCTGCTTTACTCCAAGTGAGGCAATGTAATACTCACCCAGAAAGCTCTCGGCCATCTTGGCCAATGCACCCAGCCAATGTTAAAATGCTTGATAATTCTCACGTCTCACAAGAATCAGGATCTGCTGTAGCTGAAATAGTCAACGGCTCAAGATTAAAAGCACATACAATGGTAGATGCTGCTGTCAAGGCAATTTCAACTGTGAAGGAAGGGGAAGATGCATATACTAAGATTGGAGAAGCCTTGGATCATATAGATAAACGGCAATTAACATCTGATCCTAGGGTATCAGTGATCAGATCTCCAGAGCAGGTCAATGGCAGTTTGGGTCACCACAATCATTTTGTCTCTGGCACATGTGATCCCCAGCCTACAAATAATGCTTCTGGTACCAAATTGCAGGATGTGTCTGACAAAAACGAGGCACAAATTCCATCTGAGCTTATCACTTCATGTGTGGCTACTTTGCTCATGATACAGACATGTACTGAGCGGCACACGCCAGCCGATGTGGCTCAGATAATTGATTCTGCGGTTTCAAGTTTGCATCCATGCTGTCCTCAGAATCTGCCCATCTACCGGGAGATAGAAATGTGCATGGGAAGGATTAAGACCCAAATATTAGCTCTTATACCGACATCTATCTGA
Protein Sequence:
- >Ciclev10000076m|Citrus_clementina|MYB_related|Ciclev10000076m
MAPTRKSRSVNKRYANEVSPAKDVISPSKSKQKKKLSDKLGPQWSKGELQRFYEAYRNYGKDWKKVAAQVRNRSAEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEGSDSERESNDASEMPRKSQKRKRAKVQLSASKEDISQSWSMAATGGCLSLLKRSRIDGNQPRAVKKRTPRFPVSYSQKKDDRDDYIPLNKKDRRSAVDANDDEVAHVAALALTEASQRGGSPQVSQSPHKKTEHGKSSPVQIWDKMFPPAETAHPDAREALNEEGCPEARILNRRPENGAYTRARKSLMDMEGVGTVEVHQKGKKFYRKKMKVEEVRNSLSDDEGEACSGTEEGLSSRKGKVGSEISNAKNDHLPLQMQRKRSKKLFFGDESTALNALQTLADLSLMLPDSTMESESSVQLKEERTAFDIDDKSSAPEETSTSHPKEKIKHLGPKEKALNTITEAEDIIPRKSKLGRYSGNDVETVAEVKEQPEPPNSMSKRKRKPVLSKKISNSEALTDTHMTRTLESEALAEEHNKFASKGKRTSQNSAQSKQWKPGRVLEGSSVNDQNRASIDLVAPTAQAPVASPASLPTKHQSRRKMDLKRKLSSKEMKFSENSLKTQPNKNSLSQEDRLLSVKEKLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLSKRFLHDEREKLKQYRESVRKHYAELRTGVREGLPRDLPRPLSVGQRVIAIHPKTRELHDGSVLTIDHDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEALRRQISADKFSAISKELQVNGHPNFGSPMLFASDGHLEKAPILPNTLQKQAKGDMNHALPQAKSLATDIVSAQQAAYGQLCTVPQIQAREATVRALSEEALLMELKNTNNDILESQNGGESSLKDSEPLKKHIATASSALLQVRQCNTHPESSRPSWPMHPANVKMLDNSHVSQESGSAVAEIVNGSRLKAHTMVDAAVKAISTVKEGEDAYTKIGEALDHIDKRQLTSDPRVSVIRSPEQVNGSLGHHNHFVSGTCDPQPTNNASGTKLQDVSDKNEAQIPSELITSCVATLLMIQTCTERHTPADVAQIIDSAVSSLHPCCPQNLPIYREIEMCMGRIKTQILALIPTSI*