Information report for Cc09_g05210
Gene Details
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Functional Annotation
- Refseq: XP_027087506.1 — uncharacterized protein LOC113708958 isoform X1
- Refseq: XP_027087507.1 — uncharacterized protein LOC113708958 isoform X1
- TrEMBL: A0A068VEV1 — A0A068VEV1_COFCA; Uncharacterized protein
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Nicotiana tabacum: XP_016491354.1, XP_016491353.1, XP_016491352.1, XP_016491350.1, XP_016491349.1, XP_016491351.1, XP_016496045.1
- Petunia inflata: Peinf101Scf01833g00017.1
- Sesamum indicum: XP_011093305.1, XP_011093304.1, XP_011093303.1, XP_011093302.1, XP_011093301.1, XP_011093300.1, XP_011076930.1, XP_011093307.1
Sequences
CDS Sequence:
- >Cc09_g05210|Coffea_canephora|MYB_related|Cc09_g05210
ATGTCCCAAATCACAAATACTACAGACCTAAGGGGCCTCTTGGTAAATATTAATCGAAACCTCAAAATACTGTTCAATATAGAAAACAAAACCTTTAAGATTGTTCAGCGATTGCTGTTAGCTATACAAATCTCCGGCAGGGAAGAAAATTTGACAATATGGTGTGTTGTGCCCTCAGATAACTGTAATGGTCTTCAGGTGTTGGGAAGTTGTGCAACAGGGTTGGAGCAGCTCCCAATGGATGCAGACCTTTTTGATGATATATTAACGGACAATGCTGTCAAGACTGCTAGGGCTGGTGGCAAGTTTCAACCTAAGGCCAAGCCATGTGGCCCCCCACGTCCAATAAAAAAAAATTCAGGTCCATCTTCGTTACCTTCCTCTGAGCCAGTTCGGACTAATGATGTTTCTGAGAGCACAGCTGATGAATGTCACGAAAAGGAAAAACCAGCTGCTTCAGTTGATGATAGGAGCTTTGGAGTTGTAAATTGTACATCACAACACCTTGACAGTAGTGGGAATGGCAACCCAATTGCTTCTTTGGGTCCTGTTATGGACATTTTCGTGCCTGATAGCAATGAAGATTGGCATTCTTGCTTTGAAAAAACCATGGGAGAGAATTCCGACATATTCATTGGTTTGGAATCACTTGGTGATTTTCTTCCTGATTCTGCAACTGTTTTGGATAATTCTATTCCTTCTTCTGAGGCACGAAATGTTCATATTTCTGACAGTGAGAATACAGAAGGAGGACTAGCCGATCCCCTCATTCCCAATATTTCATCACAAAGTGAATTTTCAACAGCTCAAGATCCTTTAGCTGGCACTGATCGTATTGTTGTTACTAGCGGCGGTTGTTCAGATGATAGAAACTTGGACACAGAGGAAATGGAGACTTATCAAGTGGACTCTCTAGATATGTCTGAGCTAACAACTAGCTCTGGTCGGCGAAAATTCCAACCAAAATCAAAGATGCAGGCTCATAGACAGGGAAGTGGATCTAGTATTCCCGATCTGGATATGGTTGACCCTGTTCTCTGTCAGCAAGATTTGGAGTCTGTTCCCTCTGAAGTTGATGTTGTGGATTGCAGATCAGTTCCTGCATCACCAACAGATGATATTCTTGATGTCTCATCTGCAGGACCAAATCAGACTGCTCCAGCACAATTAACATCTGAAGTTCTGTTAGATGCAGAACCGAGCAATCTTATGGGGGCTTCCTATCAAGAAGATGGCATTCTTGTAGATCACTCGGAGGCTGTTCTTGAATTGCCTGGAAAACTGGCTTCTCGTAGGGCAAAGAGTGGAAAAGACGAATCTGAGGATGAGGATCTTGAGGATAGGGATCTGCCAGCTGAGTCTCTTAGTAATTCTGTTCTAAACGAGGATGACAACACTGATGAGGAATTTCAATTGGAAGATGATTCACAAACCAAAAAGTCGCAGAAAAAATGCAAGAAACCTACTTTTGATAAGGAAAAACCAGCAAGAAAGCGAAAGAAGGATACTGAAGCATCAGAGCAGGCAGTCAAAGCAGCACCTAAGAAGTTCTCTCACTCTACTAGGAGGAGAAGAGTTGACAAGGCTTTATTGGAAACTCCAGAAGATGAAATTGACTTCCAGAAGGTGCCTCTTAGGGATCTTATATTGCTTGCAGAGTACAGGGAACGGATGGCGAAAAAGGAGGCAACAACAACACCAGGACCACTTTCAAATCAGAGCAATGGTAATTGTTCTGCACGTGACAATGAGGATGGGGCAGCTGGTACTTCTGAACAGTATGGTGAAGATGAGGCCTTTGCTTCAGAACAAGGCAGAGAAGCTAATGATGAACAAGAAAGTCCTCAGGTCGAAGAAAATTCTGGCTACTTCAACTATCAGACTTACATGGACAAAACTCCAATAGCAAGATGGTCAAAGCAGGACACAGAATTATTCTATGAGGCTGTGCGACAGTTTGGAACAGACCTTTCGATGATCCAACAACTTTTTCCTGGTAGGACACGTAGGCAGATAAAGTTGAAATACAAGAAAGAAGAGCGACAGCATCCTTTGATGCTTCGTGAAGCTCTTAGTACACGTTCTAAAGATCATTCCCATTTTGAACTAGTGATAGAGCGTCTGAAGCAAATGGCAGCCGAGGAAAAGCAAAACTCTAGTACAGCTGATTCAGTTAATTTGATGGGAGAGGAGGAAGCAGAAGAGGAGACACTTGAAACAAATGAAATGGATGAAGAAGCAAAGTCTGAACAAATTGATGGAGGAGTGCTTGGCAATATGGAGCCGGATATTTCAGAAACTCAGAGTCCTGAGAAGTCTTATGATAGCGAAGAAGAATTGCTACGTTGGAGTCAATATAAGAGCGAAATTTAA
Protein Sequence:
- >Cc09_g05210|Coffea_canephora|MYB_related|Cc09_g05210
MSQITNTTDLRGLLVNINRNLKILFNIENKTFKIVQRLLLAIQISGREENLTIWCVVPSDNCNGLQVLGSCATGLEQLPMDADLFDDILTDNAVKTARAGGKFQPKAKPCGPPRPIKKNSGPSSLPSSEPVRTNDVSESTADECHEKEKPAASVDDRSFGVVNCTSQHLDSSGNGNPIASLGPVMDIFVPDSNEDWHSCFEKTMGENSDIFIGLESLGDFLPDSATVLDNSIPSSEARNVHISDSENTEGGLADPLIPNISSQSEFSTAQDPLAGTDRIVVTSGGCSDDRNLDTEEMETYQVDSLDMSELTTSSGRRKFQPKSKMQAHRQGSGSSIPDLDMVDPVLCQQDLESVPSEVDVVDCRSVPASPTDDILDVSSAGPNQTAPAQLTSEVLLDAEPSNLMGASYQEDGILVDHSEAVLELPGKLASRRAKSGKDESEDEDLEDRDLPAESLSNSVLNEDDNTDEEFQLEDDSQTKKSQKKCKKPTFDKEKPARKRKKDTEASEQAVKAAPKKFSHSTRRRRVDKALLETPEDEIDFQKVPLRDLILLAEYRERMAKKEATTTPGPLSNQSNGNCSARDNEDGAAGTSEQYGEDEAFASEQGREANDEQESPQVEENSGYFNYQTYMDKTPIARWSKQDTELFYEAVRQFGTDLSMIQQLFPGRTRRQIKLKYKKEERQHPLMLREALSTRSKDHSHFELVIERLKQMAAEEKQNSSTADSVNLMGEEEAEEETLETNEMDEEAKSEQIDGGVLGNMEPDISETQSPEKSYDSEEELLRWSQYKSEI*