Information report for Cc06_g16040
Gene Details
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Functional Annotation
- Refseq: XP_027068075.1 — uncharacterized protein LOC113693677
- TrEMBL: A0A068UR98 — A0A068UR98_COFCA; Uncharacterized protein
- GO:0003677 — Molecular Function — DNA binding
- GO:0005515 — Molecular Function — protein binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Actinidia chinensis: Achn190451, Achn286431
- Fragaria vesca: mrna22621.1-v1.0-hybrid
- Gossypium arboreum: Cotton_A_07767_BGI-A2_v1.0, Cotton_A_07768_BGI-A2_v1.0
- Gossypium hirsutum: Gh_A09G1194, Gh_D09G1200, Gh_A09G1193, Gh_D09G1201
- Malus domestica: MDP0000310918
- Nicotiana benthamiana: Niben101Scf03863g07002.1
- Nicotiana tabacum: XP_016463328.1, XP_016472903.1
- Salvia miltiorrhiza: SMil_00009290-RA_Salv
- Sesamum indicum: XP_011078831.1
Sequences
CDS Sequence:
- >Cc06_g16040|Coffea_canephora|MYB_related|Cc06_g16040
ATGGCCGGACCCAACGGAGCCACCGGAGACTACGGCAACGAATCGGAGGCCCCAGCTGAACGACTGGACTCCGACGACGCCGCCCACTGGGGAACATGGGAAGATCTATTGCTAGTCTGCGCCGTCAACCGTTACGGCACCAACAGCTGGGAATCCGTCGCCCTCGAAATCCAGAAACGGTCTACCTCTCCTTTTCTCTCGTTATCGTTAACCCCGCGTAACTGCCAGATGAAATACCTCGACCTCACCCGCCGATTCCTCTTCAAACATGATCCTCGTAATACTGATAACGCCTACAAGGACGACGACGTCGAAGCTGCCGGTCATGATGGTAGTATAATCTCCACGGATGAATCGGTTCCCTTGCTCGAAGAGTTGCGAAAGCTCCGCGTTGCTGAACTCCGCCGCGAACTCGAACGTTACGATCTATCCATCGTGACGTTGCAATCGAAGGTGAAGAAAATGAAGGAAGAAAGAGAGAGGTGTTCGACAGTGAGTGAGATTAGAGAGGAGAAGGCATCAGTTCTGAGGAAAAGTGAAGAGGCGGAGGCTCCGCCGGAGAGAGATGCCTCTGAAGATAAGGTAAAAGTTATTATGGATGAGCTGGAAAAGTCACCGTCATCGATGGCCAACAACAAGGATGAGCAGTCCGTGAATGGATCCGTTCCCAAGGACGGAAGAGTTGGGGAAATAGAAGCGGGGAGAGACGAGGATAAGCTGGTTAAGGAAGAGGATTCGGGTTATGGAAGTTCAGATAGTGTGGAGAGAGAATACCGGAAGCCTGGACCTGAATCGGTTCCGAACGAAGTGAAGGTAGAACCGGAATCGGTGAGTCACTCACCTGAGTTAGTGGAATCGGTGGCCGAGTCAAAGGATGGTGGTGCGACTAAATCGAGGAGAGATGGTGAAAACGACGACGTGCCTCCCGGGAGCACTAAGAATCTGGATCTCCAAAACGACAATAGTTCTCCACCCGTTAAATTAGAAGCTTCAGTTGAATCTCAGCCGTTAATCGACTTTCTAGATCATGTGAAAGGTCACAAGCTCGGCTCACTATTCCTGCGCCGGCTCGACAGCCAGGAAGCTCCAAATTACAAGAGCTTGATCCGGCAACATGTTGACCTTGAAGCAGTGCGAAGAAGGGTCAAAGAAGGTATTTACTCGGACAGCAATCTCAAGTTCTTTCGCGATCTACTGCTGCTTGTCAACAATGCCATGGTCTTCTTCGGCAAGAATACCCCAGAATTTCTTGCTGCAATGGAGCTTCGACATCTTATTGCAAACGAGATGGCTCGGAGAAATGCCAAGTCGTCAGATTCATCGTCTGAAAAACAAGCTTCACTACAAAAAGCATCCTTGCCTGACAAGGGAAGCTCTGAACCATCAGAATCTTTGCTCCGAAAACCTAAGCTTGGAGGTCAATTGATTGTTTGCCGTAAACGTAGCTCAATTGCTGCAAAAGCATCTGCATCATCATCAGCATCTGATAAGAAGAGAGACCAAAACAAAATGCCAACTGAGGATAGCGCTGGCCTGGATTCCAAGCACCCATCCCGCCGTCAACAGCCTGCTAGGGCCGAAGGACCAAGAGTCACAAAGAAGAGATCAGCAGATAGATTTGCTTCAGCTTCCACGAGCTTGAAGAAAAATGCCAAAAACGGTGCTGGCACTAATTCCAAACAAATGTCAGGCACAAATTTAGAGAAGAACAAAGGGAAGGGAGGGTCATCTTCTCAGCAACCGGACCCTAGATGTGAAAATAAGAACAACCAATCAAGTGCAGACTTGAAGAAACGGAGTGCAGCTAACTTCTTGAATCGAATGAAGCAAAGCTCTTCCTCCAACAACAGTACATTATTAGATGCATTGAAGGGTTCCCCACTCAGTGCCTCCAATAACGGCAGAGGAGGATCTGAGCTCAAGAAGGATGAAAATAGTAAGGGGAGTGGGGGATCCAATCTTAGGAAGAATGAGCATGGAAAGGGAGGTGGAGGATCCGAGCATAAGAAGAATGAAAACGTCAAGTGGAGTGGAAAGAAAGCACAGGTCTCCACGAGGAGTTCAGATGTAAAGCAGGCAACGGAAAAGACTATCCCAGCAACGAAATCGCTTGGAAGACCACTAAATAAAGGTGCTGCACCTCCTGCTCCATCTGGAAAACGGGGTAGAGGTGATAGAGAGAGTGAATCAGCAGCTTCAAAACAACAAAGAAAAAAGCCAAGAAAGTAA
Protein Sequence:
- >Cc06_g16040|Coffea_canephora|MYB_related|Cc06_g16040
MAGPNGATGDYGNESEAPAERLDSDDAAHWGTWEDLLLVCAVNRYGTNSWESVALEIQKRSTSPFLSLSLTPRNCQMKYLDLTRRFLFKHDPRNTDNAYKDDDVEAAGHDGSIISTDESVPLLEELRKLRVAELRRELERYDLSIVTLQSKVKKMKEERERCSTVSEIREEKASVLRKSEEAEAPPERDASEDKVKVIMDELEKSPSSMANNKDEQSVNGSVPKDGRVGEIEAGRDEDKLVKEEDSGYGSSDSVEREYRKPGPESVPNEVKVEPESVSHSPELVESVAESKDGGATKSRRDGENDDVPPGSTKNLDLQNDNSSPPVKLEASVESQPLIDFLDHVKGHKLGSLFLRRLDSQEAPNYKSLIRQHVDLEAVRRRVKEGIYSDSNLKFFRDLLLLVNNAMVFFGKNTPEFLAAMELRHLIANEMARRNAKSSDSSSEKQASLQKASLPDKGSSEPSESLLRKPKLGGQLIVCRKRSSIAAKASASSSASDKKRDQNKMPTEDSAGLDSKHPSRRQQPARAEGPRVTKKRSADRFASASTSLKKNAKNGAGTNSKQMSGTNLEKNKGKGGSSSQQPDPRCENKNNQSSADLKKRSAANFLNRMKQSSSSNNSTLLDALKGSPLSASNNGRGGSELKKDENSKGSGGSNLRKNEHGKGGGGSEHKKNENVKWSGKKAQVSTRSSDVKQATEKTIPATKSLGRPLNKGAAPPAPSGKRGRGDRESESAASKQQRKKPRK*