Gene Details:

• Gene ID: Cc04_g02580
• Gene Name: GSCOC_T00021931001
• Gene Family: MYB_related Family
• Description: MYB_related Family protein
• Species: Coffea canephora
• Source: MYB_related family gene from PlantTFDB

Protein Features:

• Gene3D:  G3DSA:4.10.60.10
• PROSITE profile:  PS51294
• SuperFamily:  SSF46689
• TIGRFAMs:  TIGR01557
• SMART:  SM00717
• Gene3D:  G3DSA:1.10.10.60
• Pfam:  PF00249
• InterPro:  IPR001878    IPR017930    IPR009057    IPR006447    IPR001005

Annotation Proteins:

• Refseq:  XP_027126029.1  — transcription factor MYBS3
• Swissprot:  Q7XC57  — MYBS3_ORYSJ; Transcription factor MYBS3
• TrEMBL:  A0A068TPK6  — A0A068TPK6_COFCA; Uncharacterized protein
• STRING:  PGSC0003DMT400067994  — (Solanum tuberosum)

Gene Ontology:

• GO:0006355  — Biological Process — regulation of transcription, DNA-templated
• GO:0009651  — Biological Process — response to salt stress
• GO:0009723  — Biological Process — response to ethylene
• GO:0009733  — Biological Process — response to auxin
• GO:0009739  — Biological Process — response to gibberellin
• GO:0009753  — Biological Process — response to jasmonic acid
• GO:0046686  — Biological Process — response to cadmium ion
• GO:0005634  — Cellular Component — nucleus
• GO:0003677  — Molecular Function — DNA binding
• GO:0008270  — Molecular Function — zinc ion binding

Family Introduction:

• A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.

Literature:

• A novel leaf-specific myb-related protein with a single binding repeat.   DOI:  10.1016/s0378-1119(96)00521-5 ;  PMID:  8996094

Sequences: