Gene Details:

• Gene ID: Cc04_g01670
• Gene Name: GSCOC_T00021825001
• Gene Family: MYB_related Family
• Description: MYB_related Family protein
• Species: Coffea canephora
• Source: MYB_related family gene from PlantTFDB

Protein Features:

• Gene3D:  G3DSA:4.10.60.10
• PROSITE profile:  PS51294
• SuperFamily:  SSF46689
• TIGRFAMs:  TIGR01557
• SMART:  SM00717
• Gene3D:  G3DSA:1.10.10.60
• Pfam:  PF00249
• InterPro:  IPR001878    IPR017930    IPR009057    IPR006447    IPR001005

Annotation Proteins:

• Refseq:  XP_027125104.1  — LOW QUALITY PROTEIN: telomere repeat-binding factor 4-like
• Refseq:  XP_027168700.1  — LOW QUALITY PROTEIN: telomere repeat-binding factor 4-like
• Swissprot:  F4I7L1  — TRB4_ARATH; Telomere repeat-binding factor 4
• TrEMBL:  A0A068TNS6  — A0A068TNS6_COFCA; Uncharacterized protein
• STRING:  EOY27161  — (Theobroma cacao)
• STRING:  XP_010242277.1  — (Nelumbo nucifera)

Gene Ontology:

• GO:0006334  — Biological Process — nucleosome assembly
• GO:0009651  — Biological Process — response to salt stress
• GO:0009723  — Biological Process — response to ethylene
• GO:0009733  — Biological Process — response to auxin
• GO:0009751  — Biological Process — response to salicylic acid
• GO:0009753  — Biological Process — response to jasmonic acid
• GO:0046686  — Biological Process — response to cadmium ion
• GO:0000786  — Cellular Component — nucleosome
• GO:0005634  — Cellular Component — nucleus
• GO:0003677  — Molecular Function — DNA binding

Family Introduction:

• A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.

Literature:

• A novel leaf-specific myb-related protein with a single binding repeat.   DOI:  10.1016/s0378-1119(96)00521-5 ;  PMID:  8996094

Sequences: