Information report for Cc02_g39990
Gene Details
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Functional Annotation
- Refseq: XP_027159704.1 — protein LHY
- Refseq: XP_027159706.1 — protein LHY
- Refseq: XP_027159707.1 — protein LHY
- TrEMBL: A0A068UJ96 — A0A068UJ96_COFCA; Uncharacterized protein
- STRING: VIT_15s0048g02410.t01 — (Vitis vinifera)
- GO:0009409 — Biological Process — response to cold
- GO:0009651 — Biological Process — response to salt stress
- GO:0009723 — Biological Process — response to ethylene
- GO:0009733 — Biological Process — response to auxin
- GO:0009737 — Biological Process — response to abscisic acid
- GO:0009739 — Biological Process — response to gibberellin
- GO:0009751 — Biological Process — response to salicylic acid
- GO:0009753 — Biological Process — response to jasmonic acid
- GO:0042754 — Biological Process — negative regulation of circadian rhythm
- GO:0043433 — Biological Process — negative regulation of sequence-specific DNA binding transcription factor activity
- GO:0046686 — Biological Process — response to cadmium ion
- GO:0048574 — Biological Process — long-day photoperiodism, flowering
- GO:0005634 — Cellular Component — nucleus
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
- GO:0044212 — Molecular Function — transcription regulatory region DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >Cc02_g39990|Coffea_canephora|MYB_related|Cc02_g39990
ATGGACACTTACTCCTCTGGAGAAGAACTGATAATTAAAGCCAGGAAGCCTTACACTATAACTAAGCAACGTGAGCGATGGACCGAGGAGGAGCATAATAGGTTCCTAGAAGCCTTGAAGCTGTACGGACGTGCCTGGCAGCGTATAGAAGAACATATAGGAACAAAGACTGCTGTGCAGATCAGAAGTCATGCACAGAAATTCTTTACAAAGTTGGAGAAGGAAGCCCTTGCTAAAGGAACCCCAATAGGACAAGCTCTTGATATTGAAATTCCACCTCCCCGTCCCAAAAGGAAACCATGTAATCCATATCCTCGAAAGATGAGCATTGGTCTGCCTACTTCCCAGGTGGAATCAAAGGATGGAAAATTAGGGAATCCAAGTTCTTCTCTGCCCCAGGCTGAACACATACTAGATCTGGAGAACGAACCAGCTGCTGAGAAACCTGAGGGTGAGAAGTTTGAAGATGCTAAGGAAAATCGTGATGAGGGTGAATCCAATAAATGTTTTAACCTTCTGCAAGCATCTCCTGGTATCCCCCCATCTTCAGCAAACACATGCTCCTCAACAATGGCTTCAGGAAAATCGTCTGTCCTAATGGAGTTCGTGCCAATTTTCAATGAGGTGGTCAATAGGGATGAAACTACTGAATCCTATGTTACTGTTGAAGCCGGACCAAATCAGAATTCAGACAAATTTTATACCATACAGTCATTTGAGGAGAATGGCACTTGTAACAGCAGAAATTGGGCAAATGCACACTCTTTAAATGATAAACCGGCTCAAAACAAAGGAAATGTACCGGAACAATCTGAAAATATTGACACCTCGCCAAAAAATGGTGTACAATCTCCGAAGAGCCAACCCAGACATGTTGCGGTGCACATTCTTGATGGGAGCTTAAGAATGAATGCTCCGAATGTTTCTGCCCATATGCCATATGAGGAATCCTTATTTCTTGAGATCGGTGGGGTTAATTCAAACATATTCTCTACTCTTTCTTCATCTGCTACATCTGAGCATCAGAGCAGTGCATCAAGGTTTTCCATTAGTGAGCCATTTGTCGGTTTCAATCCTATCTTGACTCCAGTCCATCAAGAAGATTATCATTCATTCCTGCATGCGTCCTCTACCTTCTCAAATCTAATTGTATCTGCTTTATTACAAAATCCAATGGCTCATGCTGCAGCAAGCTTTGCTGCTAGTTTGTGGCCATGCTCAACCACAGAAGCTCCTGCGGAGTCGCCTGGAGGAGGTACAGGAGGATTTACAGCAAGACAGATGAATGCAGCTCCAAGCATAACATCAATTGCCACGGCCACAGTGGCGGCCGCAACTGCATGGTGGACAGCCCATGGGCTTTTGCCACTTTGTGCTCCATTTCACATGGGTTTAAACTATGTGCCTGTGTCAGGCTCCGCAGTTCCTGCAGTTACCAATCAACCAAGAGTTGACATTACTGAAAGAAGAGAAGAAATCAGTGGTCCTCCCTTGGATGCTAAACATCTCGAACCAGAATATTGTGAAGCTCTGCAAGAGCAGCATTCAACCTCAAAATCACCGACTTTGTCATTGTCAGATTCTGTGGAAAGTAAAGGTCTGAATTCAAGTAATAAATCAACTGCTAAAAAAACTGATAGTGCAGCAGTGACTGATCTTAATGATTCAAACAAGCCAAAGGGTAGGAAACGGGTAGACCGCTCTTCATGTGGATCAAATACACCTTCGAGCAGTGAAGTAGAGACAGATGCTTTGGAGAAGCTTGAGAAAGGAAAGGAAGAGTTAAGGGAACCTGTTGTAAGTCAGCCTACTGCTGATTCGAGTGGTCGACGAAGTAGAAGCTCCAGTAGCACAAGCGATTCTTGGAAGGAGGTTTCTGAGGAGGGCCGGCTGGCTTTTCAGGCTCTATTTTCCAGGGAAGTACTGCCACAAAGCTTTTCTCCTCCACATGATTCAAAGAATAAAGGAAAGAACACTAATGAGAAAAATAAGGATAACGCAGATGGGAAAGGTGACAAGGGATACCTGCTAGACCTCAATGGGAAGATGTGCACGAATTCTGCCACTCATCAAGATTTGGAGAATAATTTGAGTTTAAGATGTTTAAACATCACGGAAGGGGGACTACTGACTACGGGAAAACTGAAAATGCGTCGGACAGGATTTAAACCTTACAAAAGGTGCTCTGTGGAGGCCAAGGAGAACAGGTTGGTAAGTGCTGGAAGCCAAGAAGAAGAAAAAGGTACGAAGAGAATACGGTTGGAGGGTGAGGCTTCTACTCATTGA
Protein Sequence:
- >Cc02_g39990|Coffea_canephora|MYB_related|Cc02_g39990
MDTYSSGEELIIKARKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFTKLEKEALAKGTPIGQALDIEIPPPRPKRKPCNPYPRKMSIGLPTSQVESKDGKLGNPSSSLPQAEHILDLENEPAAEKPEGEKFEDAKENRDEGESNKCFNLLQASPGIPPSSANTCSSTMASGKSSVLMEFVPIFNEVVNRDETTESYVTVEAGPNQNSDKFYTIQSFEENGTCNSRNWANAHSLNDKPAQNKGNVPEQSENIDTSPKNGVQSPKSQPRHVAVHILDGSLRMNAPNVSAHMPYEESLFLEIGGVNSNIFSTLSSSATSEHQSSASRFSISEPFVGFNPILTPVHQEDYHSFLHASSTFSNLIVSALLQNPMAHAAASFAASLWPCSTTEAPAESPGGGTGGFTARQMNAAPSITSIATATVAAATAWWTAHGLLPLCAPFHMGLNYVPVSGSAVPAVTNQPRVDITERREEISGPPLDAKHLEPEYCEALQEQHSTSKSPTLSLSDSVESKGLNSSNKSTAKKTDSAAVTDLNDSNKPKGRKRVDRSSCGSNTPSSSEVETDALEKLEKGKEELREPVVSQPTADSSGRRSRSSSSTSDSWKEVSEEGRLAFQALFSREVLPQSFSPPHDSKNKGKNTNEKNKDNADGKGDKGYLLDLNGKMCTNSATHQDLENNLSLRCLNITEGGLLTTGKLKMRRTGFKPYKRCSVEAKENRLVSAGSQEEEKGTKRIRLEGEASTH*