Information report for Cc01_g01650
Gene Details
|
|
Functional Annotation
- Refseq: XP_027075043.1 — protein ALWAYS EARLY 3-like
- Swissprot: Q6A332 — ALY3_ARATH; Protein ALWAYS EARLY 3
- TrEMBL: A0A068UX25 — A0A068UX25_COFCA; Uncharacterized protein
- STRING: XP_009595580.1 — (Nicotiana tomentosiformis)
- GO:0005730 — Cellular Component — nucleolus
- GO:0016592 — Cellular Component — mediator complex
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >Cc01_g01650|Coffea_canephora|MYB_related|Cc01_g01650
ATGGCTCCGGCAAGAAAGTCTAGAAGTGTCAATAAACGTCATTTGTCGATCAATGAGGTTTCTCCTATTAAAGGTTCCAGTAATGGTAGAAGAAATAGTAAGCGGAAGCGAAAACCGACTAACAAGCTTGGGCCTCAATGGAGCAAGGAAGAGATAACTCGTTTTTATGAAGCATATCGGAAGTATGGTCAAGACTTTAAAAAGGTGGCTGCTGCTGTGAGAAATCGCTCTGGTGACATGGTGGAGGCCCTGTTCTCAATGAATAGGGCTTACTTAGCTCTTCCAGAAGGGACTGCTTCAGTAATTGGGCTGGTTGCAATGATGACAGACTACTACAGCAATTTGGCAATAACTGACAGCGAACAAGAAAGCAATGATGGTGCTGGACCATCTCGAAAAGCTCAAAGGCACACTGAGGGAAAAGGTCAGCCTAGTACCACCAAAGCATCTGATGGACATTTTTCTCGTTCCCCAACTGTAACAGCAGGCTATGGTTTCCAATCATTGCTGAAGAAGAAGCGGTCAGGAGGAAGCAGAGCTCGTGCTGTGGGGAAAAGGACACCACGGGTCCCTGTTGCGTACTCTTATGAAAACAACAAGGGGGAGAAGTTCTTTTCAACTACCAGGCGGGGTGATGATGATGTTGCTCATGAGATAGCGTTGGCTTTGACAGAGGCTTCACAAAGAGGTGGTTCTCCCCAGGTTTCTCAAACACCAAGCAGAAGAACAGAAAGTGTTATGTCATCTCCTGCTCGGAATGCAGAAACCAGGCGTGCTGAACTCAAAATGGCTAATTACAAGCATGTAGAAAGTGATGTGGATGAAGAAGAATTAGAGGGTAGTATGGAAGCTGACACTGGAGAACTATCAAGGTACAAAACTTATTTAAAGCAAACTGGACGTGTTGGTAGTTTGGTCCCGAAAGGAAGAAGATTCGATGGAAAGAGGCTAGATGTTGATGATAGCAGTGACAATCATTTGGAAGACACAAGGGAAGCATGTAGTGGGACGGAAGAAGGTCAACGATTTGGTGCAGCGAGATATGCAGATGCTAGAAATTCCAAGTCGTCTTACCAAGGTCCAAGGAAGAGGAGTAAAAAGGTTCTTTTCAGAAGAGATGAAGATTCTGCATTTGATGCCTTGCAAACTTTGGCTGATTTATCCTTGATGTTGCCAGCAGAAGCAAATGAAGATGAGTTGATGGTGGAAATTAAAGATGAACATGTTGATCATGTGGATGAATCTGGTTCATTAGAGGCAATACCTGCACCACATCAGAGGGACAAGCGTAGATCTTCAGGGCAGAAAATAAAAGGAGATCAATCAACGATGGCTAGACTGGAAATGGCTTCTACCAAAATTCCAAAATCGGGAAAGATGTCTCTTTATGATGTTAGTGTTGTTCCTGAAGTGAAAGACGAAGTTTACCCCTCTAAATCTATTCGCAAGAAACCAAAGATACTGACATCTAAGATCCGGAAGTCCGAATCTCATGTGAATAGTCAACTGAGTGAGCCTCAGGAGGCTGAGACTAGAGATTTGGGGAAGATGATTAAGAACAAGAAATCTTCTCACAGTTCTTCACCAAAATTGGTAAAAAATGTTGATCATTCTTCTAGTGCTGATCCAAGAATAGAGGGAAGTGATTCCGCTCAATCAACCATACAGGCCCCTCCTGCAAACCAAGTTAACTTGCTAACCAGAGTAAGGAGCAGGCGCAAGAGGGACCTGAACAAACCGCAAATTCAGAAAGATTTGAAGCTTTCAGAGAAAATTTCAAATGACAGGTCTAATGTACCTTTACCCTCAGTTAATGATACAGCATTTAGTGTTAAGGGAAAACTCACCAATTGCTTATCTAATCACCGACTAAGGAGATGGTGTGCATATGAATGGTTTTACAATGCTATTGATTACCCTTGGTTTGCTAAAAGAGAGTTTGTGGAGTATCTGTATCATGTTGGATTGGGCCATGTTCCAAGGCTAACTCGTGTAGAGTGGGGTGTGATAAGGAGTTCACTGGGAAAACCTCGGCGTTTTTCTCAACAGTTTTTGAAGGAAGAAAAGGAGAAACTTAATAAATATAGGGATTCTGTAAGGACCCATTACACTGAATTGCGCAAAGGTATCAGAGAAGGACTCCCGACAGATCTTGCTAGACCTTTGACAGTTGGCCAACGTGTTATAGCTATCCACCCAAAAACAAGAGAAATTCATGATGGTAGTGTGCTAACAGTTGATCACTCCAGGTGCCGGGTTCAATTTGACCGTCCCGAGCTGGGTGTTGAATTTGTCATGGATGTTGATTGCATGCCCTTAGATCCTATGGAAAATATCCCCACAATGCTTGCAAGGCACATTGCCGTTGATAAGTTTTTTGAGAACTACAATGAGCTGAGGATGAATGAACAAGCAAAAGAGTACATAAAAATTTCATCTGGTGACAACGTGGAGAACATCAATGGGCTTTCTAATTTGTCTTCATCAACTTACCCTGTAACTAATCTATTAAAGCAGACAAAGGTGGCACCAGAAGATGCCAATTTGCAGATTAGGGCTGTACAGATGGAAACACCCACCAACACATATTCTCAGCCTTGTATACCTGCTCAAGTTCAGGCGAAGGAAGCTGATGTTCAGGCTCTTGCTCAGCTTACCCGTGCTCTGGATAAAAAGGAAGCGGTAGTTTCAGAGTTGAAGCGTATGAATGATGATGTAGTGGAAAATTGCTCACTTAAGGAGTCAGAGTCTTTTAAAAAGCAATATGCGGCAGTTCTTGTACAGTTACACGAAGTTTCTTCTGCTTTGATTTGCTTGCGACAGAGGAATACATATCAAGGAAACATTTCACTTGGATGGCCAAGACCAGTAGCCAATTTGGGTGATCCTGGTTCCATGTTGAGCTCTTTGGATCGCTCTACCAGCCAGTCGCAGGATTCTGGATCTCATATCAGTGAAATCATTGAAAGTTCAAGGAAAAAAGCAAGATCCATGGTAGATGTAGCATTGCAGGCCATGTCCTCGCTTAAAGGTAGGGAGAATACATTTGAGAAGATTGAGGAGGCTATTGATTATGTAAATGAGCAGCTTCCTTCTGATGATTCCTCTGTTCCAGCTGCTCCCGATCCTAACCTGAAAAATGCGACAGACAGGAATGAGGCACAAATCCCTTCGGAGCTTATCACTCAATGTGTAGCTACTCTGCTTATGATTCAGAAATGTACAGAGAGGCAGTTTCCACCAGCCGATGTGGCTCAAATATTGGATTCTGCAGTTACAAGCTTGAAGCCTTGCTGCCCACAAAACCTTCCAGTTTATACAGAAATACAGAAGTGCATGGGAATTGTCAGGAACCAAATATTGGCGCTTATACCTACTTAG
Protein Sequence:
- >Cc01_g01650|Coffea_canephora|MYB_related|Cc01_g01650
MAPARKSRSVNKRHLSINEVSPIKGSSNGRRNSKRKRKPTNKLGPQWSKEEITRFYEAYRKYGQDFKKVAAAVRNRSGDMVEALFSMNRAYLALPEGTASVIGLVAMMTDYYSNLAITDSEQESNDGAGPSRKAQRHTEGKGQPSTTKASDGHFSRSPTVTAGYGFQSLLKKKRSGGSRARAVGKRTPRVPVAYSYENNKGEKFFSTTRRGDDDVAHEIALALTEASQRGGSPQVSQTPSRRTESVMSSPARNAETRRAELKMANYKHVESDVDEEELEGSMEADTGELSRYKTYLKQTGRVGSLVPKGRRFDGKRLDVDDSSDNHLEDTREACSGTEEGQRFGAARYADARNSKSSYQGPRKRSKKVLFRRDEDSAFDALQTLADLSLMLPAEANEDELMVEIKDEHVDHVDESGSLEAIPAPHQRDKRRSSGQKIKGDQSTMARLEMASTKIPKSGKMSLYDVSVVPEVKDEVYPSKSIRKKPKILTSKIRKSESHVNSQLSEPQEAETRDLGKMIKNKKSSHSSSPKLVKNVDHSSSADPRIEGSDSAQSTIQAPPANQVNLLTRVRSRRKRDLNKPQIQKDLKLSEKISNDRSNVPLPSVNDTAFSVKGKLTNCLSNHRLRRWCAYEWFYNAIDYPWFAKREFVEYLYHVGLGHVPRLTRVEWGVIRSSLGKPRRFSQQFLKEEKEKLNKYRDSVRTHYTELRKGIREGLPTDLARPLTVGQRVIAIHPKTREIHDGSVLTVDHSRCRVQFDRPELGVEFVMDVDCMPLDPMENIPTMLARHIAVDKFFENYNELRMNEQAKEYIKISSGDNVENINGLSNLSSSTYPVTNLLKQTKVAPEDANLQIRAVQMETPTNTYSQPCIPAQVQAKEADVQALAQLTRALDKKEAVVSELKRMNDDVVENCSLKESESFKKQYAAVLVQLHEVSSALICLRQRNTYQGNISLGWPRPVANLGDPGSMLSSLDRSTSQSQDSGSHISEIIESSRKKARSMVDVALQAMSSLKGRENTFEKIEEAIDYVNEQLPSDDSSVPAAPDPNLKNATDRNEAQIPSELITQCVATLLMIQKCTERQFPPADVAQILDSAVTSLKPCCPQNLPVYTEIQKCMGIVRNQILALIPT*