Information report for Cagra.4247s0012.1.p
Gene Details
|
|
Functional Annotation
- Refseq: XP_010511098.1 — PREDICTED: mucin-5AC-like isoform X1
- TrEMBL: Q9C548 — Q9C548_ARATH; Myb-family transcription factor, putative
- STRING: Cagra.4247s0012.1.p — (Capsella grandiflora)
- GO:0009737 — Biological Process — response to abscisic acid
- GO:0009751 — Biological Process — response to salicylic acid
- GO:0009753 — Biological Process — response to jasmonic acid
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >Cagra.4247s0012.1.p|Capsella_grandiflora|MYB_related|Cagra.4247s0012.1.p
ATGGTTGATAACAGTAATAATAAGAAGAGGAAGGAGTTTATCAGTGAAGCAGACATCGCCACTCTTTTGGAGAGATATGATACTATGACGATACTGAGGTTGCTACAAGAAATGGCTTATTATGCTGATACTAAGATGGATTGGAATGAGTTAGTGAAGAAGACTAGTACTGGAATTACTAATGCTAGAGAATATCAGTTGCTATGGCGGCATCTTGCTTATCGAGATTCTCTTCTCCCTGTGGAAGATAATACTCAACTTATGGGTATTGTTACGGTTTCTTGGGAGAATGATGATAGTGATATGGAGTGTGAATTGGAAGCCTCCCCTGCAGTCAGTGTTGATATAGTAACAGAAGCTGTTGCGCATGTAAAAGTGATGGCTTCTTCCTATGTGCCAAGTGAGTCTGATATTCCTGAAGACTCAACTGTTGAGGCTCCCATGACCATTAACATACCTTACTGCCTCCCTAGGGGTGCTCAGGAACCATCAGACTCCTTTTGGTCGTCAAGAGGGATGAATATCACCTTTCCTGTTTCTCTTCCAAAAGCAGCTGAGGGACATAATGGAAATGGGTTAGCCAGTAGCATGGCTCCTCGGAAGAGAAGAAAAAAATGGTCAGCGGAGGAAGATGAGGAGCTTATTGCTGCTGTTAAGCGACATGGTGAAGGCAGCTGGGCCCTTATCGCTAAGGAAGAATTCGAGGGAGAGCGAACACCCTCACAACTCTCGCAGGTCTTAATTTCACTGGGCTGTTATTGTTTCCTCGTTTTCCTCATATCTTTGAATTATCTTCAAAAACATTATGCATTCTTTCCTGTTTATGTGTCATATGCATGGTCTTTCTTTACCATCACATGCAGAGAGCTATTTCGTAGTCATAGAGTTATGCGGTGGGGGGCTATAAGGAGAAGGTGTGATACTTCAAACACTTCTACCCAAACAGGGATACAGCGAACAGAAGCACAAATGGCAGCTAATCGTGCATTATCTTTAGCAGTGGGAAATCGGCTACCCTCAAAAAAACTTGCAGTAGGTACACCTCCAATGCTTTCATCCGGTACCATCACAGGGGCACAAGCCAATGGTGCCAACAGTGGTAGTACATTGCAAGGTCAACAACAGTCTCAGCCACAAGTTCAAGCTTTGCCACGGCCAGCTGCATCAGCTTCAAGTATAAAATCTCGAGTTCCTGGGAAGAAAACAACAACAAATTCCAGTTCCAGAGTAGAACTAATGGTAACCGCTAATTCAGCAGCTGCTGCTGCCTGTATGTCTGGCCTGGCAACTGCTGTATCAGTGCCAAAGACTGAACCAGGAAAGAATAATGTTTCTGCGTTGGTGCCGAAGGTTGAACCCGTAAAAACCACTTCCACAGCCTCTTTGCCTCGTCCTTCTGGTATATCATCAGTACTGAATGCTGAGCCTATAAAAACTGTTTCGGCAGCCTCTGTGCCTCGTCCACTAGGTATAGTTTCAGCACCAAAGGTTGAGCCTGTAAAAACTGCTGCTTCTGCAGCCTCTTTACCTCGTCCATCAGCCTCTTTGCCTCGTCCATCAGGTATTGTCATATCACCACCAAGGGCTGCGCCTGTAAAAACCGCTCCTGCAGCCTCTTTGCCTCGTCCATCAAATATTCTATCAGCACCAAAGGCTGAGCCAGTAAAGAGTGTTTCAGCTACTGCCAGTAACACTAAAGCGGTTGGACCTGTGAATTTAAGGCAGTCAGTTAACGGAAGCTCAAATCACGTGATATCTTCATCACCCTCTAATAAGCCTTCACTTATGGCTCCTCTCCCCAAAGGATCTACAATCCAGAATAATTCAGTTCCTCCTAGTTTTGCATCGTCAAGGTTGGCCCCTACACAGAGAGTTCCTGCAGCTACTGTTATGCCACAGAAGCCAAGTGTTGGAGCAGCAGTTGCTGCAGTTTCGAAGCCGGTGGGTGTACAAAAACAGCAAACTCAGGGAAACAGAGCAAGCTCCTTGGCCACAACAGCACTTCCGCTAAATAAAACTCTCCCAACAAATTCAGTGATTAGCACATCGAATGTGGTGGCTACACAAGTGGAGACTCCTAGTCTTATGCCTAAGAAAAACCAAGTAGTTGGCAGTTGCACTGATAAAATTTTGTTGGATAAACCACCTGAAAAAGAAAGTAGTACCACGACAACACCTCTAGTAGTAGCTGCAGCTGAATCAAAATCCAAAGATGAAGCAAGTCACAGAGAAAGTCAAGATGTTGCAGCCGTAACAGGGACAAGGCAGAAGGAGTTATAA
Protein Sequence:
- >Cagra.4247s0012.1.p|Capsella_grandiflora|MYB_related|Cagra.4247s0012.1.p
MVDNSNNKKRKEFISEADIATLLERYDTMTILRLLQEMAYYADTKMDWNELVKKTSTGITNAREYQLLWRHLAYRDSLLPVEDNTQLMGIVTVSWENDDSDMECELEASPAVSVDIVTEAVAHVKVMASSYVPSESDIPEDSTVEAPMTINIPYCLPRGAQEPSDSFWSSRGMNITFPVSLPKAAEGHNGNGLASSMAPRKRRKKWSAEEDEELIAAVKRHGEGSWALIAKEEFEGERTPSQLSQVLISLGCYCFLVFLISLNYLQKHYAFFPVYVSYAWSFFTITCRELFRSHRVMRWGAIRRRCDTSNTSTQTGIQRTEAQMAANRALSLAVGNRLPSKKLAVGTPPMLSSGTITGAQANGANSGSTLQGQQQSQPQVQALPRPAASASSIKSRVPGKKTTTNSSSRVELMVTANSAAAAACMSGLATAVSVPKTEPGKNNVSALVPKVEPVKTTSTASLPRPSGISSVLNAEPIKTVSAASVPRPLGIVSAPKVEPVKTAASAASLPRPSASLPRPSGIVISPPRAAPVKTAPAASLPRPSNILSAPKAEPVKSVSATASNTKAVGPVNLRQSVNGSSNHVISSSPSNKPSLMAPLPKGSTIQNNSVPPSFASSRLAPTQRVPAATVMPQKPSVGAAVAAVSKPVGVQKQQTQGNRASSLATTALPLNKTLPTNSVISTSNVVATQVETPSLMPKKNQVVGSCTDKILLDKPPEKESSTTTTPLVVAAAESKSKDEASHRESQDVAAVTGTRQKEL*