Information report for CA11g10960
Gene Details
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Functional Annotation
- Refseq: XP_016553241.1 — PREDICTED: telomere repeat-binding factor 1 isoform X1
- Refseq: XP_016553242.1 — PREDICTED: telomere repeat-binding factor 1 isoform X2
- Swissprot: Q8VWK4 — TRB1_ARATH; Telomere repeat-binding factor 1
- TrEMBL: A0A2G2VMW4 — A0A2G2VMW4_CAPBA; Telomere repeat-binding factor 1 (Fragment)
- TrEMBL: A0A2G2YFA0 — A0A2G2YFA0_CAPAN; Telomere repeat-binding factor 1 (Fragment)
- TrEMBL: A0A2G3B965 — A0A2G3B965_CAPCH; Telomere repeat-binding factor 1 (Fragment)
- STRING: PGSC0003DMT400059543 — (Solanum tuberosum)
- GO:0006334 — Biological Process — nucleosome assembly
- GO:0006357 — Biological Process — regulation of transcription from RNA polymerase II promoter
- GO:0009651 — Biological Process — response to salt stress
- GO:0009723 — Biological Process — response to ethylene
- GO:0009733 — Biological Process — response to auxin
- GO:0009737 — Biological Process — response to abscisic acid
- GO:0009739 — Biological Process — response to gibberellin
- GO:0009751 — Biological Process — response to salicylic acid
- GO:0009753 — Biological Process — response to jasmonic acid
- GO:0046686 — Biological Process — response to cadmium ion
- GO:0000786 — Cellular Component — nucleosome
- GO:0005730 — Cellular Component — nucleolus
- GO:0003691 — Molecular Function — double-stranded telomeric DNA binding
- GO:0033613 — Molecular Function — activating transcription factor binding
- GO:0042803 — Molecular Function — protein homodimerization activity
- GO:0070491 — Molecular Function — repressing transcription factor binding
- GO:1990841 — Molecular Function — promoter-specific chromatin binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Nicotiana benthamiana: Niben101Scf13995g01013.1, Niben101Scf07739g00014.1
- Nicotiana tabacum: XP_016476889.1, XP_016476888.1, XP_016476887.1, XP_016482081.1, XP_016482080.1, XP_016482079.1, XP_016482078.1, XP_016482077.1, XP_016476890.1, XP_016476126.1, XP_016476125.1, XP_016476123.1
- Petunia inflata: Peinf101Scf01065g01078.1
- Solanum lycopersicum: Solyc11g044320.1.1
- Solanum melongena: Sme2.5_00062.1_g00018.1
- Solanum tuberosum: PGSC0003DMP400040073, PGSC0003DMP400040072
Sequences
CDS Sequence:
- >CA11g10960|Capsicum_annuum|MYB_related|CA11g10960
ATGGGTGCACCTAAGCAGAAGTGGACTTCAGAAGAAGAAGCTGCTCTTAAAGCTGGGATACTTAAGCACGGGCCAGGTAAATGGCGCACGATTCTCAAGGATCCAGAATTTAGTGGAGTATTGTTTTTGCGTTCAAACGTAGATCTCAAGGACAAGTGGAGGAACATGACTGTAATGGCAAATGGTTGGAGTTCTCGAGAGCAAACAAAGTTGGCGGTCAAAAAGATGAAACAGGCCCCTAAACAGGATGGGAGTCCTATGACTGATACGACTGCTGCTGAAAGTGATGAAGAAGCTGCTGAAGCAAGGCCAGCCACAACTTCTAGTGGTTCTCCACAGATACATGGTTCAAAAAAATCTATGATAAGGTTGGATAATCTTATAATGGAGGCTATAAGCAGCTTGAAGGAGCCAGGTGGTTCTAACAAGACTACAATAGCTGAATACATAGAGGCTCAATACTGGGCACCTCCAAACTTTAAAAGGCTATTGTCAGGGAAACTGAAGTATTTAACTGCAACAGGAAAACTTATCAAGATGAAGCGTAGGTATAGAATAGTACCTACTTCAACACCATCTGACAGTAGAAGAAACCTGTCCATTACACTTTTGGACAACAAACAGAGGATCTTCTCCAAGATTGATCGTGATGATTTGAACATGCTTACATCTCAGATTGATTTAGAGTTGGCTAAAATGAAGCACATGAAACCTCAAGAGGCTGCAGCTGCTGCTGCACAAGCAGTTGCTGAAGCAGAAGCAGCTATAGTTGAGGCTGAGGAGGCGGATAGGGAGGCTGATGCTGCTGAAGCTGATGCTGAAGCCGCTCAAGCCTTTTCAGTAGCTGCAAACAAGACACTACATGGGAGAAGTGCCCCAAGGATGGTAAGACATCCTTTTTTACCAATTATTTGGTCATTGTGTATCATTTTATTTGTCGCTCCTATCTATCTTTCATTTTATTGTTGGTAG
Protein Sequence:
- >CA11g10960|Capsicum_annuum|MYB_related|CA11g10960
MGAPKQKWTSEEEAALKAGILKHGPGKWRTILKDPEFSGVLFLRSNVDLKDKWRNMTVMANGWSSREQTKLAVKKMKQAPKQDGSPMTDTTAAESDEEAAEARPATTSSGSPQIHGSKKSMIRLDNLIMEAISSLKEPGGSNKTTIAEYIEAQYWAPPNFKRLLSGKLKYLTATGKLIKMKRRYRIVPTSTPSDSRRNLSITLLDNKQRIFSKIDRDDLNMLTSQIDLELAKMKHMKPQEAAAAAAQAVAEAEAAIVEAEEADREADAAEADAEAAQAFSVAANKTLHGRSAPRMVRHPFLPIIWSLCIILFVAPIYLSFYCW*