Information report for CA08g16690
Gene Details
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Functional Annotation
- Refseq: XP_016539420.1 — PREDICTED: myosin-16 isoform X1
- Refseq: XP_016539421.1 — PREDICTED: myosin-16 isoform X1
- TrEMBL: A0A2G3AVM6 — A0A2G3AVM6_CAPCH; Telomere repeat-binding factor 2
- STRING: XP_009606148.1 — (Nicotiana tomentosiformis)
- GO:0006334 — Biological Process — nucleosome assembly
- GO:0009793 — Biological Process — embryo development ending in seed dormancy
- GO:0000786 — Cellular Component — nucleosome
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Nicotiana benthamiana: Niben101Scf04657g02001.1
- Nicotiana tabacum: XP_016476126.1, XP_016476125.1, XP_016476123.1, XP_016476122.1, XP_016476121.1, XP_016476120.1, XP_016501293.1, XP_016501292.1
- Petunia inflata: Peinf101Scf03039g06035.1, Peinf101Scf01065g01078.1
- Solanum lycopersicum: Solyc01g106940.2.1
- Solanum melongena: Sme2.5_01964.1_g00005.1
- Solanum tuberosum: PGSC0003DMP400044570, PGSC0003DMP400040073, PGSC0003DMP400040072
Sequences
CDS Sequence:
- >CA08g16690|Capsicum_annuum|MYB_related|CA08g16690
ATGGGTGCACCTAAACAGAAGTGGACTCCAGACGAAGAAGCTGCTCTTAAAGCTGGGGTCCATAAGTATGGACCAGGCAAATGGCGGACAATCCTCAAGGACCCAGAATTTAGCAAAGTGTTGTCCTCGCGTTCAAATGTAGATCTAAAGGACAAGTGGAGGAACATGGGTGTGATTGCAAACGGGTGGGGTTCTAGAGAGAAAGCAAGGTTGGCTCTCAAAAGAATGAATCAAGCCCGTAAACAGGATGAGAGTTCTTTAGCTGTCATTACTGAGGCTAAAAGTGATGAGAAAATGGCTGAAGCAAGGCTAGCTACTACTTCAATTGGTTCTCCACAGATTGGTGGGTCAAAAAGATCTATCATAAGATTGGATAATCTTATAATGGAGGCTATAAGCAACTTGAAGGAGTCAGGTGGTTCCAACAAGACTAGTATAGCAACATACATAGAGGATCAATATTGGGCACCTCCAAACTTTAAAAGGCTGCTTTCAGCGAAACTGAAGTACTTAACTGCAACTGGGAGACTTACCAAGGTGAAGCGGAAGTATAGAATAGCAACAATACCTGTATTATCGGACAAAAGAAGAATCCCTTCCATTCAGCTGTTGGAAAGCAGGCAGAGGATCTCCGCTACAGTTGATCAGGATGATTTAAAGATGCTCATTAAGGCTCAAGTAGATTTAGAGTTAACTAAGATGAGGAGTATGACACCTCAAGAGGCAGCAGCAGCGGCTGCACAAGCTGTTGCAGAAGCAGAAGTATCCATGGCAGAAGCTGAGGACGCTGCTAGAAAGGCTGATGCTGCTGAGGCTTATGCCGAAGCTGCACAAGCCTTAGCAGAAGCTGCAATGAAGGCTCTAAAAGAGAGAAGCAGCCCAAGGATTCCAACTCTCTTGTTGGCCTGTAAATATGGTAAAAGTGGTGTTTGTAATAGCAAAGGCCTTCCAGCCATGGATGGAAATTTGAATGATAATGCATTTTTGCGGGCTCGGATCAAAGAATTGGAGCGCGAGCGTGATGAATTGCATAAAGACATTGAGCAGCTATGCATGCAACAAGCTGGACCTAGCTATATTGGGATGCCTACTCGCATGCCTCTTCATAGTAGGATAGCTGGGTTGGAGCAGGAGGCTGAAAGCTTGAAAAAGAAACTATCTGCTTGCACACGAGAAAATCAGAATCTTCAAGAAGAGCTATCAGAAGCTTATAACATCAAAGGTCAACTGGCTGATCTACACAGCGCAGAAGTTTCCAAGAATATAGAAGCAGAAAAGCAGCTTAAATTTTTTCAAGGTTGTGTTGCTGCTGCATTTTCTGAGCGAGACCATGCTGTAATGGAGGCTGAAAAGGCCAAGGAACAGGAGGAGCTTATGTCAAGAGGACTTCATGAACTTCAGCAGAGGATTGAAGAGCTAAGCTGTGAATTACTTGAAGAGAAAATATTGACGGCTACTTTGCAGGGTGATATGGACAGGGAAGAGAGGTTGGATGAGATTTTCAAGGAGGTTGTCCATAAGTTCTATGAGATCAGACGGCAGACATTGGAGGATATTGAAGATGTGTCCTGGGAAGATAAATGCGCGTGCCTCCTGCATGATTCGTCTGAAATGTGGACTTTCAGCAATCCTGGGGAAACATCCACCTCTAACTACATTAGTTCTCTGGAAGAACAAGTGGAGACACTGCGAAAATCTTTGGATAATCTTCAGTACAAGCTACTAGTAGGTCTTGAAATAGAAAATCACTTGAAGAAAAAAGTGCGCGCCTTGGAAAAACAGAAAATTCTTTCAGAAGAGAAGCTGAGGGCTCAAATTTCGGCATTTCGCCACTATCATTCTCAGCATAGAGTTAATATTACAAGCTTTCTTGATGAGGGATTTTCTCATATTAAATCAGCTATGAACATGGTGGAAGAAAAGCTCAAGGACTGCAGCATAAGTGAGAGAGACTTAAATTCTTCTCAAGTGGATGATTTACAGTTCAGTGAACTTGAATGTCAAGATGTTCCGATAAACAATGTTGATGGTTCAGATTTGATCTTTAAGAGGAATCAGCCTAGCTTGACAACTACCATTACTGTTGGAAACAGTGATGCTTCTAAAGCCCTTGCTGTGGCACTAAACGAGAAGGTGGAAACGTTATTACTTCTCTCACAACAAGAAGAAAGACACTTATTGGAGAGGAATGTCAATGCGGCACTGCAGAAAAAAGTTGAGGAGCTCCAGAGGAACTTACTACAAGTTACAAATGAGAAGGTCAAAGCTCTGATGGAGTTGGCACAGTTGAATCGGGACTATCAAGTATTGCAAGAGAAAGTTAATGAGGCCTCTAGACAAGGAAAATCTCTTGGTGAGATTGCAGTGAAAAGGACTCTCCAGGAAAAAGATGGAAGACTGAAAAATCTGCTGAAAACTTCATATTTGAGACGCTGGACTGGTATACAAGATTCAGATGTAAATGATGCTGACACTCATCGAGATTCTGAAGCAAATTTTGCTGATAGGAGGCCTACCAATAACGTAGATTTTGCTAGGATGAAGATAGAGAATGCAACTTTAAAAGAGAGCTTAGAAAGTATGGAACATCTAATTCGTGCAGTTAGGAGGCTTCGCCTTTCACTTTTAAAGTTTAAAGAGTCTGCTGCATCCGAAGGTATGGAGAACTGCTACTCGGTGTCATTGGACAATATTATTAATGAGGCAAGTCAGTTAAAAACTGCACTTGGAAGCTCCCTCCCTCTTAGTTGGTCAGCGGAGGCAGATTCAGGATCAGTTAGCAAACATGTTGAAGAGGAGACAGATAATGGACACTCTACACGTGAAAATATGGACTTTGTTTCTGCTGCTGGATTTGAGATGGTTGAGCTTCTGGTGTTTGTCGCGCAGCTATTGAAAGATTACAAATGCAGTTGA
Protein Sequence:
- >CA08g16690|Capsicum_annuum|MYB_related|CA08g16690
MGAPKQKWTPDEEAALKAGVHKYGPGKWRTILKDPEFSKVLSSRSNVDLKDKWRNMGVIANGWGSREKARLALKRMNQARKQDESSLAVITEAKSDEKMAEARLATTSIGSPQIGGSKRSIIRLDNLIMEAISNLKESGGSNKTSIATYIEDQYWAPPNFKRLLSAKLKYLTATGRLTKVKRKYRIATIPVLSDKRRIPSIQLLESRQRISATVDQDDLKMLIKAQVDLELTKMRSMTPQEAAAAAAQAVAEAEVSMAEAEDAARKADAAEAYAEAAQALAEAAMKALKERSSPRIPTLLLACKYGKSGVCNSKGLPAMDGNLNDNAFLRARIKELERERDELHKDIEQLCMQQAGPSYIGMPTRMPLHSRIAGLEQEAESLKKKLSACTRENQNLQEELSEAYNIKGQLADLHSAEVSKNIEAEKQLKFFQGCVAAAFSERDHAVMEAEKAKEQEELMSRGLHELQQRIEELSCELLEEKILTATLQGDMDREERLDEIFKEVVHKFYEIRRQTLEDIEDVSWEDKCACLLHDSSEMWTFSNPGETSTSNYISSLEEQVETLRKSLDNLQYKLLVGLEIENHLKKKVRALEKQKILSEEKLRAQISAFRHYHSQHRVNITSFLDEGFSHIKSAMNMVEEKLKDCSISERDLNSSQVDDLQFSELECQDVPINNVDGSDLIFKRNQPSLTTTITVGNSDASKALAVALNEKVETLLLLSQQEERHLLERNVNAALQKKVEELQRNLLQVTNEKVKALMELAQLNRDYQVLQEKVNEASRQGKSLGEIAVKRTLQEKDGRLKNLLKTSYLRRWTGIQDSDVNDADTHRDSEANFADRRPTNNVDFARMKIENATLKESLESMEHLIRAVRRLRLSLLKFKESAASEGMENCYSVSLDNIINEASQLKTALGSSLPLSWSAEADSGSVSKHVEEETDNGHSTRENMDFVSAAGFEMVELLVFVAQLLKDYKCS*