Information report for CA05g17960
Gene Details
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Functional Annotation
- Refseq: XP_016554171.1 — PREDICTED: transcriptional adapter ADA2b isoform X1
- Swissprot: Q75LL6 — TADA2_ORYSJ; Transcriptional adapter ADA2
- TrEMBL: A0A2G2WV26 — A0A2G2WV26_CAPBA; Transcriptional adapter
- STRING: PGSC0003DMT400021785 — (Solanum tuberosum)
- GO:0006357 — Biological Process — regulation of transcription from RNA polymerase II promoter
- GO:0009409 — Biological Process — response to cold
- GO:0016573 — Biological Process — histone acetylation
- GO:0003677 — Molecular Function — DNA binding
- GO:0005515 — Molecular Function — protein binding
- GO:0008270 — Molecular Function — zinc ion binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >CA05g17960|Capsicum_annuum|MYB_related|CA05g17960
ATGCAAGGGGAATACTGTGTATATCCTGCACTTGCTGGGGTACTAATGCCGGATTGGCATATCAAGGAGGAAAAAGAATGCCTCAAGTGGAGACAATTTAGAATCTGTGATTCCTGTTCAATTCTTACTACTGTTGATGACTGTTCATTCTTAGTAAAGTCCAATTGGACGCGGATTCTTGTGGATAACGGTTTATTAGAGTTGATTATCTTCTTTTCTATCCATTCAATTCATTACAGGTTTTTGAATTTTGTGATCCGGCAAAGGTTTTGCTTCCATAAACTTAATCAAGGGACAACTGATGGCAAAAAGGCCTTGTATCACTGCAATTATTGCAACAAAGACCTTAGCGGGAGAACTCGTATAAAATGTGCTGTATGTTCTGATTTTGACCTATGTATAGAGTGCTTCTCTGTCGGTGCTGAGGTGCATCCTCACAAAAGCTATCACCACTATAGGGTTATGGACATCTTAGCTTTCCCACTTATCTGCCCGGACTGGAATGCGGATGAAGAGATGTTGCTTCTTGAGGGAATTGAAATGTATGGCATGGGTAATTGGGCAGAAGTAGGTGAACATGTCGGAACAAAGTCAAAAGAAGCGTGTGTCGACCATTTTAAGGACGAATACTTAGACTCACCTTACTTTCCTCTACCGGATATGACTCACGTCATGGGGAAAAATAGAAAGGAACTCCTTGCCATGGCCAAAGGGAATTTCACAGATAAGAAAGTATCCTCACTTGGTGAAGTTGTTCCGAAAGATGAATCATTTTCTCCGTCTCAAGTCAAGTATGAATATCACATTCTATATTCTGTAGTTGAAGACTCTCATAGAAAGGGTCCTTCAGGACGTTTATCTGCTGTATCCAATGCGGTCATTAACAGCATGAATGCTTCAGGAATCACAGGCATTAAAAAACCATCCAGCAAGTCGCAAATCAAAATTCAAAATGAACCTGTAAAATTGGAAGGTAGGGCCGGCAACTTATCATTCATCAGGGAAAATATTTTAAATTTATTATTGGTCGATAATTCAGGCAGAAATTTTGGAGGCAAGAAACCAAAATCGTTGAAAGAGGATGGATCCTCATTGATGAAACTAAGTGGATATATCCCCAAAAGGGAAGAATTTGATCCTGAATATGATAATGATGCGGAGCAACTATTGGCTGATATGGAATTCAAGGAAACTGAAACTGAACAGGAGCGCGAACTTAAGTTGCGTGTTCTGCGTATCTATTCCAAGAGGCTTGATGAAAGAAAGCGCCGCAAGGATTTTATTCTAGAGAGGAATTTACTCCAGCCAAGTGAATTTGAGAAGAATTTGTCACCAGAAGAGAAAGATCTATGCCGACGTTATGATGCCATTATGCGCTTCCTCTCGAAGGAGGAGCATGAAGAATTAATGAAGACTGTGGTCTCAGAACATAGATATCTGAAAAGAATACAAGAACTCAAGGAATCGAGAGCTGCTGGTTGTCATTCATCTATTGAAGTTGATAGATACTTAGAAAGGAAAAGGAAGAGAGAACTTGAAGATGGTGTTCCGAGAAAAGAAAGTTCTCAGATTGGCCCAATGAGCCAGGAGAGCCTGAACATGCCTGCTTCTTCTGACTCACTCGGAACACATTCAAATAGAAAACCTTGTAGCCAGGCGAATTTGAGTTCCATCAACGATTCGGGCGTTGCAGCTCTTTCTGCAGGAGAACTGTTATCTGAACCTGAGAAACAACTATGCCGAGAAATCAGGCTATCGCCGCATCATTATCTTCGGATGCAAGAGGTTCTTACAATACAAATTTATAGTGGCAATATCACTAGAAAATCAGATGCTTATCCCTTGTTCCAAATAGAAGCAACTAAAGTAGATAGAGTTTATGATATGCTTTTGAAGAAAGGAGTTTCACCCTTGTAA
Protein Sequence:
- >CA05g17960|Capsicum_annuum|MYB_related|CA05g17960
MQGEYCVYPALAGVLMPDWHIKEEKECLKWRQFRICDSCSILTTVDDCSFLVKSNWTRILVDNGLLELIIFFSIHSIHYRFLNFVIRQRFCFHKLNQGTTDGKKALYHCNYCNKDLSGRTRIKCAVCSDFDLCIECFSVGAEVHPHKSYHHYRVMDILAFPLICPDWNADEEMLLLEGIEMYGMGNWAEVGEHVGTKSKEACVDHFKDEYLDSPYFPLPDMTHVMGKNRKELLAMAKGNFTDKKVSSLGEVVPKDESFSPSQVKYEYHILYSVVEDSHRKGPSGRLSAVSNAVINSMNASGITGIKKPSSKSQIKIQNEPVKLEGRAGNLSFIRENILNLLLVDNSGRNFGGKKPKSLKEDGSSLMKLSGYIPKREEFDPEYDNDAEQLLADMEFKETETEQERELKLRVLRIYSKRLDERKRRKDFILERNLLQPSEFEKNLSPEEKDLCRRYDAIMRFLSKEEHEELMKTVVSEHRYLKRIQELKESRAAGCHSSIEVDRYLERKRKRELEDGVPRKESSQIGPMSQESLNMPASSDSLGTHSNRKPCSQANLSSINDSGVAALSAGELLSEPEKQLCREIRLSPHHYLRMQEVLTIQIYSGNITRKSDAYPLFQIEATKVDRVYDMLLKKGVSPL*