Information report for C.cajan_04254
Gene Details
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Functional Annotation
- Refseq: XP_020227803.1 — protein ALWAYS EARLY 3
- Refseq: XP_020227804.1 — protein ALWAYS EARLY 3
- Refseq: XP_020227805.1 — protein ALWAYS EARLY 3
- Refseq: XP_020227806.1 — protein ALWAYS EARLY 3
- Refseq: XP_020227807.1 — protein ALWAYS EARLY 3
- Refseq: XP_020227808.1 — protein ALWAYS EARLY 3
- TrEMBL: A0A151STB6 — A0A151STB6_CAJCA; Lin-9 isogeny
- STRING: GLYMA17G02741.2 — (Glycine max)
- GO:0005730 — Cellular Component — nucleolus
- GO:0016592 — Cellular Component — mediator complex
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Cicer arietinum: XP_012573519.1, XP_012573518.1, XP_012573517.1, XP_012573516.1, XP_012573515.1, XP_004508289.1
- Citrullus lanatus: Cla021725
- Cucumis sativus: Cucsa.253300.3, Cucsa.253300.1
- Glycine max: Glyma.17G024600.2.p, Glyma.17G024600.1.p
- Gossypium arboreum: Cotton_A_04877_BGI-A2_v1.0
- Gossypium hirsutum: Gh_A02G0465, Gh_D02G0520
- Lotus japonicus: Lj4g3v2367360.1
- Medicago truncatula: Medtr4g119390.1, Medtr4g119390.2
- Prunus mume: XP_016647952.1
- Prunus persica: Prupe.1G139300.6.p, Prupe.1G139300.1.p
- Vitis vinifera: GSVIVT01017770001
Sequences
CDS Sequence:
- >C.cajan_04254|Cajanus_cajan|MYB_related|C.cajan_04254
ATGGCTCCTTCTAGGAAATCTAGAAGTGTAAATAAGAGGTTTTCTAATGTTCGTGAGGCTGCATCTAGTAAAGACAAAAATTCAGAGAATGCAAGCAAAAATAGGCTGAAGGCAAGTCCTGGTATTCAGAAGAAGAGAAAATTGGCTGACATGTTAGGGCCACAATGGAATAAGGAGGAACTCGAGCATTTCTATGATGCTTACCGTAAATATGGGAAAGATTGGAAGAAGGTTGCTCTTGCAGTACGTAATAGATCTGTGGAAATGGTGGAGGCCCTGTACACTATGAACAAGGCATATTTATCTCTTCCAGAGGGTACTGCTTCTGTTGTTGGATTGATAGCAATGATGACAGATCATTATAGTGTCCTGGGAGGAAGTGACAGTGGTAAAGAAAGCACTGATGATGCAGAAATATCTAAAAGGTCTCAAAAGCGTTTGCGGGGAAAGCATCCAAGTGACAATAAAGCATTAGATGGGCACTTTTCAGATAATTCTCAGTCACATTCTGTTGCATCAGGTGATGGTTGCCTGTCATTGTTGAAGAATAGACATTCTGGAATTAGGTCTCATGCTGTTCGAAAAAGGACTCCCCGTGTCCCTATTTCATATTCTATCGGAAAAGATAATGGAGATCGGTTTTTTTCATCTGCCAGGCCTGGCTCCAAACAAATGGTTGATACTAATGATGTTACTCATAAGATTGCATTAGCATTGGCAGAGGCATCACAAAGAGGTGGATCTTCAAAAATTTCTGGATCACCCGACAAAAAATTTTTGCCCTCACCAGGTAGTTACTATTTTCAGCATCCTAAATCAGAACTTGCTGGAGCCAAGTTTGGCAGTTCTGATTTGGATGATGGTAGTTCTGAGTTGAGTTTAGGAAGCACTGAAGGTAATAATGAAGATTATTCTAGAAAAACAATTCATCGAAGTGAGGAGAATTTAAACAAGCATTTGAATGACATAAAGGAAGCCTCCAGTGGGACAGATGATGGCAAAACTCTTAGTTTTATCAAATCCAATTTTGACCCAGATTTTGCAGATGCAAAGAATACAAGGTCCTCTTACAAGGGTTCCAGGATGAAAAGTAAAAGGCTACTGTTAGAAAAAGATGAAGGTTCCGCTTTTGATGCTCTGAAAACTTTGGCTGATCTCTCTTTGATGCTGCCAGTCACAAATCCCGACACTGAGTCGTCTGCACAGTTCAAGGAAGGAAACCATGATGTTGTTGATGAATCTAAAATGGAAACACATAATGTATTTCCTAGGATTGAAAGCACTGCTTCAAGTAAATCGGGCAAGGTTTTCTTCAATAATGGAGTTGCTGTTCCTGAATCAGAGGGAACAGACCAGCTTAATGCAGGATTTAGGAAAAGGAAACAAAAATCTTTTAACTTGAAAAATGATGAAACTCATACTGGTTTTCATTTAAGTGGTTCCCAGAAAATCAAGGCTACTGATGAGGTGAAGAAACCCATGGTTAAAGGAAAGCGGTCATCTGTTTCTACTGCACATTCAAGACAACTAAAAGTTGTGAAATCCCCAGGAAATCCGTCTTCTAGCACTAATGACAAAGGGCAAGGGGATGATTCATCTTTTTCGCCCATGAAGGTTTCATCAACTAACCAAGTCAGTCCAGTAAACAGAGTAAGGCCAAGAAGAAAGATGGAAAAACCAAAACCAATGGGAAAGCTTATCAATTGTGTGTCTTCGTATCAAATGCGACGATGGTGCACTTTTGAGTGGTTTTATAGTGCTATTGATTACCCTTGGTTTTCAAAGAGAGAGTTTGTGGAGTACTTAGACCATGTTGGATTGGGTCATGTTCCAAGATTGACTCGTATTGAGTGGGGTGTCATTAGAAGTTCTCTTGGCAGACCACGAAGATTTTCCGAGCAATTTTTGATAGAAGAAAAACATAAACTTAATCAATACAGGGAATCTGTTAGATCACATTATGCTGAAATTCTTGCTGGTACCAAGGAAGGACTTCCTACTGATTTGGCCCAGCCTTTAATTGTTGGGCAGCGTGTTATTGCTATTCATCCAAAGACGAGGGAGATTCATGATGGAAGTGTACTAACTGTTGACCATTGTAGGTATAGGGTTCAGTTTGACCAGCCTGAACTTGGGGTTGAATTTGTCATGGATATTGACTGCATGCCTTTTTATCCATTTGAAAATATGCCTACATCTCTTATACAACACAATATTTCTTCTGCTCAAATAAACGAGAACTTGAATGAGCTCAAGCCTAATGGAAAACTGAAACAGAGAAAGGTTGCTGGGCACACAATATTGTCCCCTAGTGAGAACTTGGATACCTTAAAAAATCTTCATATATCCCCCAATATGCACAGAAGCAGTACTTTATCAAAACAGACACTGTCAAAGTCTACCTCCTTGCTTAATGTTAGGAAGCCAGAAACATATTCGGAGTTCTCACAGGGACTGGTGGGTTTTTCTTCAAGCTCCAAATCGCAACTGAAAGTTGTTTGCAGTGAGATTGGTAACGCCCAACTAGCATCAAGTTCTCAACCTTCCCTTCTTGAACATGTCCATTCAAAAGAAGCTGACATATTAGCTATTTCAGAGTTGAATCGTGCTCTGGACAAAAAGGAACTTGTATTGTCTGAACTGAAGCACATGAACGATGGGGTATCAGAGAGCCAGAAATATGGAGACAGCTCGGTGAAGGATTCAGAACCTTTTAGGAGAAATTATGCTTCAGTACTAAAGCAATTAACTGAAGCCAATGAACAGGTCTCTTCTGCTTTGTTTTGCTTGAGACAACGCAACACATATCAAGGAAGCTCCTCTGTTTTGTCGTTAAAGCCCATGGTTAATTTTGATGATCCTAGTGGTCAGGCCAGCTCTTCCAATTGTTCAGTTTGCCACAATCAAGAACCTGTATCTCAAAGTCATATAACTGAAATTGTTGAGAGTTCAAGAAGAAAAGCACGAACAATGGTTGTTCAAGCCACACAGGCAATGTCAAATTTAAGAAAGACAGAAAGTAAGGTTGAAAGAATTGAGGATGCAATAAGGTTTATCAATAGTCAACTTTCGCTGGAAGACCCTACTGCTTCAGCCACAATATTTCTGCCTGCAGACTCTTTTACTCTGGCTTCTCAGGATCAATTGACTGCTAGTGTATTAAATCCATTGGCAAGTTGTCATGTACAAGATGCTGAACTTAACAGTTCATCTGACCAAAATGAAATGAAAATTCCCTCAGAACTTATATCTCATTGCCTAGCTACATTGTTCATGATTCAGAAGTGTACGGAACGACAATTTCCCCCAGCTGATGTTGCTCAGGTACTAGATTCCGCTGTCACCAGTTTGCAGCCATTATGTTCAAAGAATCTTCCAATATATGGTGAGATACAGAAATGCATGGGTATTATAAGAAATCAGATATTGGCACTTATACCTACATAG
Protein Sequence:
- >C.cajan_04254|Cajanus_cajan|MYB_related|C.cajan_04254
MAPSRKSRSVNKRFSNVREAASSKDKNSENASKNRLKASPGIQKKRKLADMLGPQWNKEELEHFYDAYRKYGKDWKKVALAVRNRSVEMVEALYTMNKAYLSLPEGTASVVGLIAMMTDHYSVLGGSDSGKESTDDAEISKRSQKRLRGKHPSDNKALDGHFSDNSQSHSVASGDGCLSLLKNRHSGIRSHAVRKRTPRVPISYSIGKDNGDRFFSSARPGSKQMVDTNDVTHKIALALAEASQRGGSSKISGSPDKKFLPSPGSYYFQHPKSELAGAKFGSSDLDDGSSELSLGSTEGNNEDYSRKTIHRSEENLNKHLNDIKEASSGTDDGKTLSFIKSNFDPDFADAKNTRSSYKGSRMKSKRLLLEKDEGSAFDALKTLADLSLMLPVTNPDTESSAQFKEGNHDVVDESKMETHNVFPRIESTASSKSGKVFFNNGVAVPESEGTDQLNAGFRKRKQKSFNLKNDETHTGFHLSGSQKIKATDEVKKPMVKGKRSSVSTAHSRQLKVVKSPGNPSSSTNDKGQGDDSSFSPMKVSSTNQVSPVNRVRPRRKMEKPKPMGKLINCVSSYQMRRWCTFEWFYSAIDYPWFSKREFVEYLDHVGLGHVPRLTRIEWGVIRSSLGRPRRFSEQFLIEEKHKLNQYRESVRSHYAEILAGTKEGLPTDLAQPLIVGQRVIAIHPKTREIHDGSVLTVDHCRYRVQFDQPELGVEFVMDIDCMPFYPFENMPTSLIQHNISSAQINENLNELKPNGKLKQRKVAGHTILSPSENLDTLKNLHISPNMHRSSTLSKQTLSKSTSLLNVRKPETYSEFSQGLVGFSSSSKSQLKVVCSEIGNAQLASSSQPSLLEHVHSKEADILAISELNRALDKKELVLSELKHMNDGVSESQKYGDSSVKDSEPFRRNYASVLKQLTEANEQVSSALFCLRQRNTYQGSSSVLSLKPMVNFDDPSGQASSSNCSVCHNQEPVSQSHITEIVESSRRKARTMVVQATQAMSNLRKTESKVERIEDAIRFINSQLSLEDPTASATIFLPADSFTLASQDQLTASVLNPLASCHVQDAELNSSSDQNEMKIPSELISHCLATLFMIQKCTERQFPPADVAQVLDSAVTSLQPLCSKNLPIYGEIQKCMGIIRNQILALIPT