Gene Details:

  • Gene ID: Bostr.7867s1302.4.p
  • Gene Family: MYB_related Family
  • Description: MYB_related Family protein
  • Species: Boechera stricta
  • Source: MYB_related family gene from PlantTFDB

Protein Features:

Annotation Proteins:

  • Refseq:  XP_020873110.1  — SWI/SNF complex subunit SWI3D
  • Swissprot:  Q8VY05  — SWI3D_ARATH; SWI/SNF complex subunit SWI3D
  • TrEMBL:  D7MF14  — D7MF14_ARALL; Uncharacterized protein
  • STRING:  Bostr.7867s1302.1.p  — (Boechera stricta)

Gene Ontology:

  • GO:0003677  — Molecular Function — DNA binding
  • GO:0005515  — Molecular Function — protein binding
  • GO:0008270  — Molecular Function — zinc ion binding

Family Introduction:

  • A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.

Literature:

Sequences:

CDS Sequence:
  • >Bostr.7867s1302.4.p|Boechera_stricta|MYB_related|Bostr.7867s1302.4.p
    ATGAGGAAGTTTCATTCCAATCCGAACATACAAATAGAACTAAAAGACTTAACAGAACTCGAGGTTGGAGACTCGGACGCAAAGCAAGAGGTGATGGAGTTCTTGGACTACTGGGGCTTAATCAATTTCCACCCATTTCCACCCTCAGATGCTGGTTCTACGGCTTCTGATCATGATGATTTAGGGGATAAGGAGTCACTGCTTAACAGTTTATATCGATTTCAAGCTGATGAGGCTTGCCCTCCTCCTGTTCACAAGCCTCGTCTCACAGCACAAGCTACGCTATCAGGGTTGTTTCCAGATCCGATGGCTGCTGATGAATTGCTAAAGCAAGAGGGTCCAGCAGTCGAATATCACTGCAATTCTTGTTCAGCTGATTGCTCTCGTAAGCGCTACCACTGCCCGAAACAGGCAGATTTTGACTTATGTACGGAATGCTTTAACAGTGGCAAGTTCAGCTCAGATATGTCATCTTCTGATTTTATATTAATGGAGCCTGCTGAGGCCCCTGGCGTTGGTAGTGGGAAGTGGACTGATCAAGAGACTCTTCTTCTCCTTGAAGCTTTAGAAATCTTCAAGGAAAATTGGAATGAGATCGCAGAGCATGTTGCTACAAAAACAAAAGCTCAGTGTATGCTTCATTTTCTTCAAATGCCAATCGATGATGCATTTCTTGATCAAATTGACTATAAAGATCCAATCAGAAAAGACACGACAGATTTAGCTTTGTCTAAAGATGATCAATCTGTCCTAAAAGATGCACCTGATGAGGCAGAGAATAAGAAACGTGTTGATGAAGATGAGACTATGAAGGAAGTTCCAGAACCAGAAGTTGACAATGAAGGTAAAGTCTCTCAGGAATCTTCGAAGCCTGAAGAAACTAATGAAGTGGAAGCAGACCAGAAAACACCCAAACTAGAAACCGTCATTGATGAAAGATGTAAGGATGAGACTGACGAAAACATTGCTCTGAAAGCTCTTGCTGAAGCTTTTGAAGATGTTGGTTATTCCTCCACACCTGAAGCCTCGTTTTCCTTTGCTGATTTAGGAAACCCTGTCATGGGACTGGCAGCCTTTCTGGTGAGATTGGCAGGATCTGATGTTGCTACTGCGTCAGCCCGGGCTTCCATAAAATCTCTTCACAGCAATTCTGGATTGTTACTTGCTACAAGACATTGTTATATTCTGGAAGATCCACCAGACAACAAGAAGGATTCAACTGAATCAAAAAGTGCGGATGCAGAGGGGAATGATGATAATGCCCATAAAGATGAGCAACCAGAAGAAAAAAGCCAGAAAGCAGAAGAGGTCTCCTTGAATTCAGATGATAAGGAAATGCCATATACTGACACAGATGCCGTACAAGAAAAAAGATCTAGTAAGCCAGTCACAACTGACAATTCAGAGAAACCAGCAGATATAATATGTCCATCGCAGGACAAATGTTCAGGGAAGGAGCTTCAAGAACCTTTGAAGGATGTGAATAAGCTTTCTAGTGAAAATAAAGACGCCTCTCAAGCAACTATCTCCCAGTCAGCTGCAGATGCTTCTCAGCCAGAAGCATCCAGAGATGTGGAGATGAAGGATACACTACAGTCAGAGAAGGATCCTCAAGATGTAGTCAAAACAGTAGGAGAGGAGGTTCAACAGGCTAAGGAGGAGGGTGCAAAGGATGTTCTTAGTACTCCAGACACGTCTGTTGTCCAGCAGCCCATTGGATCAGCTTCTGCACCGGAAAATGGAACAGCTGGTGGAAATCCAAATAAAGAAGGAAAGAAAGAGAAGGATTTTTGTGAAGGGACAAAAGACAAACATAACATCGAGAAGCTTAAGCGCGCAGCCATCTCCGCTATTTCAGCCGCAGCAGTTAAGGCAAAGAATCTTGCAAAGCAAGAAGAAGATCAAATCCGACAACTTTCTGGATCATTGATAGAGAAGCAGTTACATAAACTAGAAGCAAAGCTATCTATCTTCAATGAAGCTGAAAGCTTGACAGTGAGGGTAAGAGAGCAATTAGAAAGGTCAAGGCAACGGCTATATCATGAAAGGGCTCAGATCATAGCAGCTCGACTTGGTGTCCCACCTTCAATGTCTTCAAAAGCATCGTTACCAACAAACAGAATCGCTGCAAATTTTGCTAATGTAGCTCCAAGGCCTCCCTTGGGCATGGCCTTTCCACGCCCACCAATGCCAAGGCCTCCTCCAGGTTTTACTGTTCCTGGTTCTTTTGTAGCTGCTACAACAATGACCGGAAGCTCAGATCCGTCTCCAGGTTCAGACAATGTTTCTTCGGTTTAG
Protein Sequence:
  • >Bostr.7867s1302.4.p|Boechera_stricta|MYB_related|Bostr.7867s1302.4.p
    MRKFHSNPNIQIELKDLTELEVGDSDAKQEVMEFLDYWGLINFHPFPPSDAGSTASDHDDLGDKESLLNSLYRFQADEACPPPVHKPRLTAQATLSGLFPDPMAADELLKQEGPAVEYHCNSCSADCSRKRYHCPKQADFDLCTECFNSGKFSSDMSSSDFILMEPAEAPGVGSGKWTDQETLLLLEALEIFKENWNEIAEHVATKTKAQCMLHFLQMPIDDAFLDQIDYKDPIRKDTTDLALSKDDQSVLKDAPDEAENKKRVDEDETMKEVPEPEVDNEGKVSQESSKPEETNEVEADQKTPKLETVIDERCKDETDENIALKALAEAFEDVGYSSTPEASFSFADLGNPVMGLAAFLVRLAGSDVATASARASIKSLHSNSGLLLATRHCYILEDPPDNKKDSTESKSADAEGNDDNAHKDEQPEEKSQKAEEVSLNSDDKEMPYTDTDAVQEKRSSKPVTTDNSEKPADIICPSQDKCSGKELQEPLKDVNKLSSENKDASQATISQSAADASQPEASRDVEMKDTLQSEKDPQDVVKTVGEEVQQAKEEGAKDVLSTPDTSVVQQPIGSASAPENGTAGGNPNKEGKKEKDFCEGTKDKHNIEKLKRAAISAISAAAVKAKNLAKQEEDQIRQLSGSLIEKQLHKLEAKLSIFNEAESLTVRVREQLERSRQRLYHERAQIIAARLGVPPSMSSKASLPTNRIAANFANVAPRPPLGMAFPRPPMPRPPPGFTVPGSFVAATTMTGSSDPSPGSDNVSSV*