Gene Details:
- Gene ID: Bostr.0568s0184.2.p
- Gene Family: MYB_related Family
- Description: MYB_related Family protein
- Species: Boechera stricta
- Source: MYB_related family gene from PlantTFDB
Protein Features:
- Gene3D: G3DSA:4.10.60.10
- PROSITE profile: PS51294
- SuperFamily: SSF46689
- TIGRFAMs: TIGR01557
- SMART: SM00717
- Gene3D: G3DSA:1.10.10.60
- Pfam: PF00249
- InterPro: IPR001878 IPR017930 IPR009057 IPR006447 IPR001005
Annotation Proteins:
- Refseq: XP_006280882.1 — telomere repeat-binding factor 2
- Swissprot: Q9FJW5 — TRB2_ARATH; Telomere repeat-binding factor 2
- TrEMBL: R0GN57 — R0GN57_9BRAS; Uncharacterized protein
- STRING: Bostr.0568s0184.1.p — (Boechera stricta)
Gene Ontology:
- GO:0006334 — Biological Process — nucleosome assembly
- GO:0009651 — Biological Process — response to salt stress
- GO:0009723 — Biological Process — response to ethylene
- GO:0009733 — Biological Process — response to auxin
- GO:0009737 — Biological Process — response to abscisic acid
- GO:0009739 — Biological Process — response to gibberellin
- GO:0009751 — Biological Process — response to salicylic acid
- GO:0009753 — Biological Process — response to jasmonic acid
- GO:0046686 — Biological Process — response to cadmium ion
- GO:0000786 — Cellular Component — nucleosome
- GO:0005730 — Cellular Component — nucleolus
- GO:0003691 — Molecular Function — double-stranded telomeric DNA binding
- GO:0042803 — Molecular Function — protein homodimerization activity
- GO:0043047 — Molecular Function — single-stranded telomeric DNA binding
Family Introduction:
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature:
- A novel leaf-specific myb-related protein with a single binding repeat. DOI: 10.1016/s0378-1119(96)00521-5 ; PMID: 8996094
Sequences:
CDS Sequence:
- >Bostr.0568s0184.2.p|Boechera_stricta|MYB_related|Bostr.0568s0184.2.p
ATGGGTGCCCCAAAGCAGAAGTGGACACCAGAAGAAGAAGCAGCTCTTAAAGCTGGAGTACTTAAGCATGGGACTGGAAAGTGGCGTACGATACTCTCGGATCCTGAGTTTAGTTTAATCCTAAAGTCTCGCTCAAATGTTGATCTTAAGGACAAGTGGAGAAATATAAGCGTGACAGCGTTATGGGGTTCAAGGAAGAAGGCTAAACTTGCGCTTAAAAGGACTCTGCCAGCTACTAAACAGGATGATAACAACACAGCTCTTAGCATTGTGGCTTTGGCTAATGACGATGAATGGGCAAAACCAACTTCACCTGGACGTTCTGGTGGTGGATCACCACGAACTTGTGCTTCAAAGAGATCAATTACAAGTTTGGATAAGATCATCTTGGAGGCAATTACCAACTTGAAGGAACTACGCGGTTCTGACAGAACATCGATCTTTATGTATATAGAGGAGAATTTCAAGACTCCGCCGAATATGAAAAGGCATGTGGCAGTAAGATTAAAGCATTTATCATCAAATGGAACATTAATTAAGATAAAGCACAAGTACAGGTTTTCTCCTAATTTTATTACCGTAGGAGCAAGACAGAAGTCTCCTCAACTCTTTTTGGAAGGAAACAAGAAGAAAGACCCACCAAAACCCGAGGAGAACGGCGCCAACAGTCTCACTAAGTCCCGAGTAGACGATGAGTTACTTATGATAAAAGGTATGACAGCTCAAGAAACTGCAGAAGCTGCAGCAAGAGCAGTTGCAGAGGCAGAATTTGCTATCACAGAGGCTGAAGAAGCAGCAAAAGAGGCAGAAAGAGCAGAAGCTGAAGCTGAAGCTGCTCAGATATTTGCTAAGGCAGCCATGAAAGCTTTGAAGTTCAGGATCCGTAATCATACTTGGTAA
Protein Sequence:
- >Bostr.0568s0184.2.p|Boechera_stricta|MYB_related|Bostr.0568s0184.2.p
MGAPKQKWTPEEEAALKAGVLKHGTGKWRTILSDPEFSLILKSRSNVDLKDKWRNISVTALWGSRKKAKLALKRTLPATKQDDNNTALSIVALANDDEWAKPTSPGRSGGGSPRTCASKRSITSLDKIILEAITNLKELRGSDRTSIFMYIEENFKTPPNMKRHVAVRLKHLSSNGTLIKIKHKYRFSPNFITVGARQKSPQLFLEGNKKKDPPKPEENGANSLTKSRVDDELLMIKGMTAQETAEAAARAVAEAEFAITEAEEAAKEAERAEAEAEAAQIFAKAAMKALKFRIRNHTW*