Information report for BGIOSGA035841-PA
Gene Details
|
|
Functional Annotation
- Refseq: XP_015619997.1 — BTB/POZ domain-containing protein At1g30440
- Refseq: XP_015619998.1 — BTB/POZ domain-containing protein At1g30440
- Swissprot: Q9S9Q9 — Y1044_ARATH; BTB/POZ domain-containing protein At1g30440
- TrEMBL: B8BMZ7 — B8BMZ7_ORYSI; Uncharacterized protein
- STRING: LPERR12G15710.1 — (Leersia perrieri)
- GO:0006334 — Biological Process — nucleosome assembly
- GO:0000786 — Cellular Component — nucleosome
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
- GO:0005515 — Molecular Function — protein binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >BGIOSGA035841-PA|Oryza_sativa_subsp._indica|MYB_related|BGIOSGA035841-PA
ATGGGTGCCCCGAAGCAGAAATGGACCGCGGAGGAGGAGTCCGCCCTCAAGGCCGGGATCGCAAAGCACGGGGCTGGGAAATGGCGCACCATACTCAAAGACCCAGACTTCAGCAACGTCCTGCGCTACCGCTCCAATGTTGACCTCAAGGACAAATGGCGGAACATGAACGTAACCGTGAACGCGTCCGGTGCCCGCGACAGGGTGAAAGCGCCCGTCGTTAAGAAGCCAAGATCCGCTCCTAAGCATGAAGGCCACTCTACCTCTACAGCTATTGCCGCGGTAACTTCAGATGGTGATGATGATGTTGCGGAGCCTGTGCCTCTTGCAACGTCTACTTCATCCAAGAGATCCCTCTCGAGGCTAGACAATATCATAGTAGAGGCAGTAAGGAGCTTGAATGAGCCTACAGGATCATACAAGACAGCCATAGCTAATTACATAGAGGAGCAATACTGGCCTCCTGCTGATTTTGATCATGTCCTGTCTTCAAAACTGAATGATCTGACAGCATCTGGGAAATTGATAAAGGTGAATCGAAAGTACAGGATAGCCCCTAGTTCATCTTTGTCAGAAGGGCGAAGCTCCAAAGTAGTGCTGCTCGAAGATATAAAAAAAGAACCAACAAAGTTAGATAGGGAAGATGTTGCAGTCCTCACTAAATCTCAAATCGATGCTGAATTAGCTCGGATGAGAACCATGACTGCAGAAGAGGCTGCTGCTGCTGCTGCTCGTGCAGTTGCAGAGGCAGAAGCTATCATGACTGAAGCCGAAGCCGCAGTAAGAGAAGCAGAGGCTGCAGAAGCTGATGCTGTAGCTGCACAAGCTTTCGCGGAGGCAGCAATGGCAACATTTAAAAACAGAAGTTCAGCAAAATTGGTAATTGCTCTAAGTACCTCAGTTCTAGTTTCAAATGATCATTCGAGCTTGAAGCTACCTGTGGGAGCTGGTGCAGCATCAGTTTCCTCCGACCTTGTTGTTCAGTTTGGTTTTTGTTTAGGGTACTGCACAACAGGGCTTCCCAGCGATGTTCTTGTTGAGGTTGGGGAGATGTCTTTCCACCTTCACAAGTTCCCCCTGCTTTCAAAGAGTGCCATCCTGGGAAGATTGATTGAGGAGAATTCAGACAGCGATGAATGTGTCATCAAATTGTCTGACATCCCTGGTGGCGCAAAATCGTTCGAGTTAGTGGCAAGGTTCTGTTATGGGCTGAAGATAGAGCTGTCTTCAGAAAATGTCGTCTACCTACGCTGCGCTGCTGAACATCTTGAGATGACAGAAGAAACATCTGGGGATAATCTGATTAATCAGACAGAGTCATTCTTTAACCAAGTAGTCCTCCGAAGCTGGAAAGATTCCCTGGAAGTGCTTCGGACATGTGATGGCCTTCTCCCTCATGCTGAAGACCTTCACATTGTGAAGAGATGCATCGAATCATTGGCTGGCAAAGCTAGCATCGATCCGGACCTCTTCGGCTGGCCAGTCTCGGAACATAGTACCATGCAAAGCCCCGGGGGAAGTGTCTTGTGGAATGGCATAAGCACGGGTGCGAAGGTTAGGAACTGCAGTTCAGACTGGTGGTATGATGATGCTTCCTCCCTGAGCTTCCCTACATACAAGAGGCTTATTTCTTCCATGGAGTCAAGAGGCATCAAACAGGAGATCATTGCGGGTTCGCTCACATACTACGCCAAGAAGTTTCTCCCAGGGTTGAATAGGCGTCAAAGCACCGGACCAATGCCCCTGCCGGCTGCTACCCTGTCTGATGAAGAACAGAGGCGCCTGCTTGAAGAGATTGATAGGATGTTGCCACTTCAGAGAGGTTTAATATCCACAAATGTTTTGCTCTGGCTGCTCCGGACCGCCATGATCCTGAAAGTCGACCGCGCTTGCATTTCAAACTTGGAGAAAAGGGTCGGGATGCAGCTGGACGAAGCCACATTGGAGGATCTACTGCTGCCAAACTTCTCATACACCATGGACACGCTCTACAACGTCGAGTGCGTTCACAGGATTCTCGACCACTTCTTGGCAATGGATCAGACCATGGGTGGCGGTGGCGCCTCCCCATGCTTGGATGATGTGATGGCATCTCCTTCGTTGGCACCGATCACCGCTGTCGCGAAGCTGATTGATGGCTACCTTGCAGAGATTGCACCTGATATCAACCTAAAGCCACTGAAATTCCAGTCTCTGGCAGCTGTTTTACCTGAATATGCTCGGCCACTGGATGACGGTCTTTACCGCGCCATTGATGTATACCTGAAGTCGCATCCGACGCTGCCTGAAGCTGAACGGGAGCAGCTATGCCGGCTGATCGACTGCCAGAAGCTGTCGCTGGAGGCGTGCACCCACGCCGCGCAGAACGAGCGGCTGCCGCTGCGGGTGGTGGTGCAGGTGCTCTTCTTCGAGCAGCTGCAGCTGAGGACGTCGGTGGCCGGCTGCCTGCTCGTCTCCGACAACCTGGAGGCCTCGTCGAGGACGCTCCGCGGCGGCGGCGCGGTGGCGGCGTCCGGCGAGGCCGGGTGCTGGGCCACGGCCGCCGTGAGGGAGAACCAGGCGCTCCGGGTCGGCATGGACAGCATGCGGCTGCGGCTGATGGAGCTCGAGCGGGAGTGCTCCGACATGCGCCAGGACATCCGCAAGCTCGGCCGCGGCCGCCGCCGCCTCCGTGGCGGTGGTGGCATCGTCGCCGGTGGCAAGGACGGCGGCGGGTGGGCGGCGCGGGTGCAGCGGATGCTGACGCCGAGGATGATGAAGCTGCAGATGTGCAGCGCGCAGCATGACGCCGCCGAGCAGCAGCGGATGAACAATGAGCACAAGAAGGTGGAGAAGGTGGCCAAGAACAAGAAGCAGCTGTCCATGGACGACGGTGACGACGAGGAGGCCTGA
Protein Sequence:
- >BGIOSGA035841-PA|Oryza_sativa_subsp._indica|MYB_related|BGIOSGA035841-PA
MGAPKQKWTAEEESALKAGIAKHGAGKWRTILKDPDFSNVLRYRSNVDLKDKWRNMNVTVNASGARDRVKAPVVKKPRSAPKHEGHSTSTAIAAVTSDGDDDVAEPVPLATSTSSKRSLSRLDNIIVEAVRSLNEPTGSYKTAIANYIEEQYWPPADFDHVLSSKLNDLTASGKLIKVNRKYRIAPSSSLSEGRSSKVVLLEDIKKEPTKLDREDVAVLTKSQIDAELARMRTMTAEEAAAAAARAVAEAEAIMTEAEAAVREAEAAEADAVAAQAFAEAAMATFKNRSSAKLVIALSTSVLVSNDHSSLKLPVGAGAASVSSDLVVQFGFCLGYCTTGLPSDVLVEVGEMSFHLHKFPLLSKSAILGRLIEENSDSDECVIKLSDIPGGAKSFELVARFCYGLKIELSSENVVYLRCAAEHLEMTEETSGDNLINQTESFFNQVVLRSWKDSLEVLRTCDGLLPHAEDLHIVKRCIESLAGKASIDPDLFGWPVSEHSTMQSPGGSVLWNGISTGAKVRNCSSDWWYDDASSLSFPTYKRLISSMESRGIKQEIIAGSLTYYAKKFLPGLNRRQSTGPMPLPAATLSDEEQRRLLEEIDRMLPLQRGLISTNVLLWLLRTAMILKVDRACISNLEKRVGMQLDEATLEDLLLPNFSYTMDTLYNVECVHRILDHFLAMDQTMGGGGASPCLDDVMASPSLAPITAVAKLIDGYLAEIAPDINLKPLKFQSLAAVLPEYARPLDDGLYRAIDVYLKSHPTLPEAEREQLCRLIDCQKLSLEACTHAAQNERLPLRVVVQVLFFEQLQLRTSVAGCLLVSDNLEASSRTLRGGGAVAASGEAGCWATAAVRENQALRVGMDSMRLRLMELERECSDMRQDIRKLGRGRRRLRGGGGIVAGGKDGGGWAARVQRMLTPRMMKLQMCSAQHDAAEQQRMNNEHKKVEKVAKNKKQLSMDDGDDEEA