Gene Details:
- Gene ID: BGIOSGA004060-PA
- Gene Name: OsI_02981
- Gene Family: MYB_related Family
- Description: MYB_related Family protein
- Species: Oryza sativa subsp. indica
- Source: MYB_related family gene from PlantTFDB
Protein Features:
- Gene3D: G3DSA:4.10.60.10
- PROSITE profile: PS51294
- SuperFamily: SSF46689
- TIGRFAMs: TIGR01557
- SMART: SM00717
- Gene3D: G3DSA:1.10.10.60
- Pfam: PF00249
- InterPro: IPR001878 IPR017930 IPR009057 IPR006447 IPR001005
Annotation Proteins:
- Refseq: XP_015638756.1 — protein RADIALIS-like 3
- Swissprot: Q1A173 — RADL6_ARATH; Protein RADIALIS-like 6
- TrEMBL: A0A0D3ERL8 — A0A0D3ERL8_9ORYZ; Uncharacterized protein
- TrEMBL: A0A0P0V5P4 — A0A0P0V5P4_ORYSJ; Os01g0635000 protein (Fragment)
- TrEMBL: A2WSZ1 — A2WSZ1_ORYSI; Uncharacterized protein
- TrEMBL: Q8RYM5 — Q8RYM5_ORYSJ; Uncharacterized protein
- STRING: OS01T0635000-00 — (Oryza sativa)
- STRING: OBART01G23860.1 — (Oryza barthii)
Gene Ontology:
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
Family Introduction:
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature:
- A novel leaf-specific myb-related protein with a single binding repeat. DOI: 10.1016/s0378-1119(96)00521-5 ; PMID: 8996094
Sequences:
CDS Sequence:
- >BGIOSGA004060-PA|Oryza_sativa_subsp._indica|MYB_related|BGIOSGA004060-PA
ATGGCATCCAGCTCCAAGGCCTCGTCCTCGTCGTCGGCGTCGGCGGCGTCGTCGGAGTGGACGAAGCAGCAGAACAAGCAGTTCGAGCGCGCCCTGGCGGTGTACGACACCGACGCCCCGGACCGGTGGCACAACGTCGCCCGCTACATGGGCGGCGCCAAGTCCGCCGAGGAGGTGCGCCGCCACTACGAGCGGCTCCAGGCGGATGTCGAGCAGATTGAGGCCGGCGGCGTGCCGTTCTCCTTGGGCTACGGCGCCACGCCACAGGCCGGCCGCCGCTAG
Protein Sequence:
- >BGIOSGA004060-PA|Oryza_sativa_subsp._indica|MYB_related|BGIOSGA004060-PA
MASSSKASSSSSASAASSEWTKQQNKQFERALAVYDTDAPDRWHNVARYMGGAKSAEEVRRHYERLQADVEQIEAGGVPFSLGYGATPQAGRR