Gene Details:
- Gene ID: BGIOSGA001075-PA
- Gene Name: OsI_03155
- Gene Family: MYB_related Family
- Description: MYB_related Family protein
- Species: Oryza sativa subsp. indica
- Source: MYB_related family gene from PlantTFDB
Protein Features:
- Gene3D: G3DSA:4.10.60.10
- PROSITE profile: PS51294
- SuperFamily: SSF46689
- TIGRFAMs: TIGR01557
- SMART: SM00717
- Gene3D: G3DSA:1.10.10.60
- Pfam: PF00249
- InterPro: IPR001878 IPR017930 IPR009057 IPR006447 IPR001005
Annotation Proteins:
- Refseq: XP_002458271.1 — protein RADIALIS-like 3
- Swissprot: Q6NNN0 — RADL3_ARATH; Protein RADIALIS-like 3
- TrEMBL: A0A0D3ES51 — A0A0D3ES51_9ORYZ; Uncharacterized protein
- TrEMBL: A0A0D9YCS5 — A0A0D9YCS5_9ORYZ; Uncharacterized protein
- TrEMBL: A0A0E0C5M9 — A0A0E0C5M9_9ORYZ; Uncharacterized protein
- TrEMBL: A0A0E0FQK3 — A0A0E0FQK3_ORYNI; Uncharacterized protein
- TrEMBL: A0A0E0N0B4 — A0A0E0N0B4_ORYRU; Uncharacterized protein
- TrEMBL: A2WTH2 — A2WTH2_ORYSI; Uncharacterized protein
- TrEMBL: A2ZW92 — A2ZW92_ORYSJ; Os01g0663051 protein
- TrEMBL: I1NQE4 — I1NQE4_ORYGL; Uncharacterized protein
- STRING: OGLUM01G29330.1 — (Oryza glumipatula)
- STRING: OMERI01G22390.1 — (Oryza meridionalis)
- STRING: ORUFI01G28390.1 — (Oryza rufipogon)
- STRING: OS01T0663051-00 — (Oryza sativa)
- STRING: ONIVA01G28760.1 — (Oryza nivara)
- STRING: ORGLA01G0208400.1 — (Oryza glaberrima)
- STRING: OBART01G25520.1 — (Oryza barthii)
Gene Ontology:
- GO:0003677 — Molecular Function — DNA binding
Family Introduction:
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature:
- A novel leaf-specific myb-related protein with a single binding repeat. DOI: 10.1016/s0378-1119(96)00521-5 ; PMID: 8996094
Sequences:
CDS Sequence:
- >BGIOSGA001075-PA|Oryza_sativa_subsp._indica|MYB_related|BGIOSGA001075-PA
ATGTCTTCTAGGTCAAGCAGCTCCTCCCGCAACAGCAACAGTGTCAACATGGACTCAGAGTGGAGCAAAAAGGAGAACAAGCTGTTCGAGGAGGCTCTTGCCTACTACGGCGAGGGTGCGCCTGACCTCTTTCACAAGGTGTCTCGCGCCATGGGAGGCACCAAGACAGCCGATGAGGTGCGCCGCCACTATGAGATCCTCGAGGACGACCTCAAGCTGATAGAGGCAAGAAGAGTCCCGTTCCCCAAGTACAATACACAGGGAGCATGGAACTGA
Protein Sequence:
- >BGIOSGA001075-PA|Oryza_sativa_subsp._indica|MYB_related|BGIOSGA001075-PA
MSSRSSSSSRNSNSVNMDSEWSKKENKLFEEALAYYGEGAPDLFHKVSRAMGGTKTADEVRRHYEILEDDLKLIEARRVPFPKYNTQGAWN