Gene Details:

• Gene ID: AT3G53790.1
• Gene Name: F5K20.90, TRFL4, TRP6
• Gene Family: MYB_related Family
• Description: MYB_related Family protein
• Species: Arabidopsis thaliana
• Source: MYB_related family gene from PlantTFDB

Protein Features:

• Gene3D:  G3DSA:4.10.60.10
• PROSITE profile:  PS51294
• SuperFamily:  SSF46689
• TIGRFAMs:  TIGR01557
• SMART:  SM00717
• Gene3D:  G3DSA:1.10.10.60
• Pfam:  PF00249
• InterPro:  IPR001878    IPR017930    IPR009057    IPR006447    IPR001005

Annotation Proteins:

• Refseq:  NP_001319741.1  — TRF-like 4
• Swissprot:  Q9M347  — TRP6_ARATH; Telomere repeat-binding protein 6
• TrEMBL:  A0A178VMQ2  — A0A178VMQ2_ARATH; TRFL4
• STRING:  AT3G53790.1  — (Arabidopsis thaliana)

Gene Ontology:

• GO:0006355  — Biological Process — regulation of transcription, DNA-templated
• GO:0031627  — Biological Process — telomeric loop formation
• GO:0000783  — Cellular Component — nuclear telomere cap complex
• GO:0003691  — Molecular Function — double-stranded telomeric DNA binding

Family Introduction:

• A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.

Literature:

• A novel leaf-specific myb-related protein with a single binding repeat.   DOI:  10.1016/s0378-1119(96)00521-5 ;  PMID:  8996094

Sequences: