Gene Details:
- Gene ID: Araha.19929s0001.1.p
- Gene Family: MYB_related Family
- Description: MYB_related Family protein
- Species: Arabidopsis halleri
- Source: MYB_related family gene from PlantTFDB
Protein Features:
- Gene3D: G3DSA:4.10.60.10
- PROSITE profile: PS51294
- SuperFamily: SSF46689
- TIGRFAMs: TIGR01557
- SMART: SM00717
- Gene3D: G3DSA:1.10.10.60
- Pfam: PF00249
- InterPro: IPR001878 IPR017930 IPR009057 IPR006447 IPR001005
Annotation Proteins:
- Refseq: XP_020879222.1 — transcription factor MYB29
- Swissprot: Q9FLR1 — MYB29_ARATH; Transcription factor MYB29
- TrEMBL: D7M0L6 — D7M0L6_ARALL; Uncharacterized protein
- STRING: fgenesh2_kg.6__738__AT5G07690.1 — (Arabidopsis lyrata)
Gene Ontology:
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0009414 — Biological Process — response to water deprivation
- GO:0009611 — Biological Process — response to wounding
- GO:0009625 — Biological Process — response to insect
- GO:0009682 — Biological Process — induced systemic resistance
- GO:0009739 — Biological Process — response to gibberellin
- GO:0009751 — Biological Process — response to salicylic acid
- GO:0009753 — Biological Process — response to jasmonic acid
- GO:0010439 — Biological Process — regulation of glucosinolate biosynthetic process
- GO:0050832 — Biological Process — defense response to fungus
- GO:0003677 — Molecular Function — DNA binding
Family Introduction:
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature:
- A novel leaf-specific myb-related protein with a single binding repeat. DOI: 10.1016/s0378-1119(96)00521-5 ; PMID: 8996094
Sequences:
CDS Sequence:
- >Araha.19929s0001.1.p|Arabidopsis_halleri|MYB_related|Araha.19929s0001.1.p
ATGCCAAGTGAGATTGCCAGATGTGAAATTTATGATCTATCTTTACTTAAAAGGTGGTCAGTCATAGCGAGACATTTGCCCAAAAGAACAGATAACGAGATTAAGAACTACTGGAACACGCATCTCAAAAAGCGCCTGATCGATAAGGGAATCGATCCCGTGGCCCACAAGCCACTTGCCTATGATTCAAACCCGGAAGAGCAATCGCAATCGGGTTCCATCTCTCCAAAGTCTCTTCCTCCTTCAAGTTCCTACAATGTACAGGAGATAAGCAGCAGTGATGAGACAGCGAAATATGATGCTTCCTTGAGCTCCAAGAAACGTTGTTTTATGAGATCGAGTTCTACATCAAAACTGTTAAACAAAGTGGCAGCTAGGGCTGCTTCCATAGGAAATATCTTAGCAGCCTCCATCCAAGGAACCTTGATCAGCTCTACACCGTTGTCTTCATGTCTCAATGATGACTTTTCCGAAACAAGTCAATATCAGTTGGAGGAATTTGATCCATTCTATCTGCAGTCATCTGAACACAAAATTGATGATATGAAAGAAGATATCGGCATCAACAATTCCGAATATGATTTCTCGCAGTTTCTCGAGCAGTTTAGTAAAAATGAAGGCGAAGAAGCTGACAATATTGGGGGAGGATATAACCAAGATCTGCTTATGTCTGATGTCTCATCAACAAGCGTTGATGAAGACGATATGATGAAGAACATAACCAGTTGGTCACATTATCTCCTTGACCATTCCGATTTTAATTATGACACGAACCAAGATTACGACGACAAGAACTTCATATGA
Protein Sequence:
- >Araha.19929s0001.1.p|Arabidopsis_halleri|MYB_related|Araha.19929s0001.1.p
MPSEIARCEIYDLSLLKRWSVIARHLPKRTDNEIKNYWNTHLKKRLIDKGIDPVAHKPLAYDSNPEEQSQSGSISPKSLPPSSSYNVQEISSSDETAKYDASLSSKKRCFMRSSSTSKLLNKVAARAASIGNILAASIQGTLISSTPLSSCLNDDFSETSQYQLEEFDPFYLQSSEHKIDDMKEDIGINNSEYDFSQFLEQFSKNEGEEADNIGGGYNQDLLMSDVSSTSVDEDDMMKNITSWSHYLLDHSDFNYDTNQDYDDKNFI*