Gene Details:
- Gene ID: AMDW01038559.1_FGP001
- Gene Family: MYB_related Family
- Description: MYB_related Family protein
- Species: Oryza longistaminata
- Source: MYB_related family gene from PlantTFDB
Protein Features:
- Gene3D: G3DSA:4.10.60.10
- PROSITE profile: PS51294
- SuperFamily: SSF46689
- TIGRFAMs: TIGR01557
- SMART: SM00717
- Gene3D: G3DSA:1.10.10.60
- Pfam: PF00249
- InterPro: IPR001878 IPR017930 IPR009057 IPR006447 IPR001005
Annotation Proteins:
- Refseq: XP_015633684.1 — transcription factor MYB62 isoform X1
- Refseq: XP_015633690.1 — transcription factor MYB62 isoform X2
- Swissprot: Q9FGY3 — MYB78_ARATH; Transcription factor MYB78
- TrEMBL: A0A0D3EJ64 — A0A0D3EJ64_9ORYZ; Uncharacterized protein
- TrEMBL: A0A0D9Y2R2 — A0A0D9Y2R2_9ORYZ; Uncharacterized protein
- TrEMBL: A0A0E0FFP8 — A0A0E0FFP8_ORYNI; Uncharacterized protein
- TrEMBL: A0A0E0JDL3 — A0A0E0JDL3_ORYPU; Uncharacterized protein
- TrEMBL: A0A0E0MQW3 — A0A0E0MQW3_ORYRU; Uncharacterized protein
- TrEMBL: B8AD22 — B8AD22_ORYSI; Uncharacterized protein
- TrEMBL: I1NJX5 — I1NJX5_ORYGL; Uncharacterized protein
- TrEMBL: Q0JR06 — Q0JR06_ORYSJ; Os01g0128000 protein
- STRING: OGLUM01G02010.1 — (Oryza glumipatula)
- STRING: ORUFI01G01910.1 — (Oryza rufipogon)
- STRING: OS01T0128000-01 — (Oryza sativa)
- STRING: ONIVA01G01990.1 — (Oryza nivara)
- STRING: OPUNC01G01580.1 — (Oryza punctata)
- STRING: ORGLA01G0016500.1 — (Oryza glaberrima)
- STRING: OBART01G01830.1 — (Oryza barthii)
Gene Ontology:
- GO:0003677 — Molecular Function — DNA binding
Family Introduction:
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature:
- A novel leaf-specific myb-related protein with a single binding repeat. DOI: 10.1016/s0378-1119(96)00521-5 ; PMID: 8996094
Sequences:
CDS Sequence:
- >AMDW01038559.1_FGP001|Oryza_longistaminata|MYB_related|AMDW01038559.1_FGP001
ATGTCGCAGAGGAGAGTTGCAGGGCCCATGGGAGTGATGAGCAAGCAGCAGCAGGAGGCCATGGCAGAGGAGATGATGGAGCTGAGGCGAGGGCCATGGACTCTCGAGGAAGACAACCTCCTCATGAACTACATTGCCTGCCATGGCGAAGGCCGCTGGAATCTCCTCGCCCGCTGCTCCG
Protein Sequence:
- >AMDW01038559.1_FGP001|Oryza_longistaminata|MYB_related|AMDW01038559.1_FGP001
MSQRRVAGPMGVMSKQQQEAMAEEMMELRRGPWTLEEDNLLMNYIACHGEGRWNLLARCS