Information report for AHYPO_021125-RA
Gene Details
|
|
Functional Annotation
- Refseq: XP_010673541.1 — PREDICTED: bromodomain-containing protein DDB_G0280777
- TrEMBL: A0A0K9S0C2 — A0A0K9S0C2_SPIOL; Uncharacterized protein
- STRING: XP_010673541.1 — (Beta vulgaris)
- GO:0003677 — Molecular Function — DNA binding
- GO:0005515 — Molecular Function — protein binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Actinidia chinensis: Achn190451, Achn286431
- Beta vulgaris: Bv4_071710_xxkn.t1
- Citrus sinensis: orange1.1g005668m
- Gossypium arboreum: Cotton_A_38079_BGI-A2_v1.0, Cotton_A_07768_BGI-A2_v1.0, Cotton_A_07767_BGI-A2_v1.0
- Manihot esculenta: Manes.06G169700.1.p
- Populus trichocarpa: Potri.003G212500.1, Potri.001G013600.1
- Prunus mume: XP_008243616.1
- Prunus persica: Prupe.6G015400.1.p
- Pyrus bretschneideri: Pbr003291.1
- Ricinus communis: 30169.m006375
- Vitis vinifera: GSVIVT01001371001
- Ziziphus jujuba: XP_015875972.1
Sequences
CDS Sequence:
- >AHYPO_021125-RA|Amaranthus_hypochondriacus|MYB_related|AHYPO_021125-RA
ATGAATGAAAAAGAGAAATATGACGAGACGACGTCGTCTAATAATGAAAATTTACGGACGAAAATGCCGGAAAATGAAGGAGAACAAACGTGGGGAGTATTAGAGGAGTTGTTGTTGGTGTGTGCCGTTAATCGCCATGGTACAGATAGTTGGGACTCCATAGCTAATGAACTCCAAAAACGTATTAAACACTCTTCTTCTCACAACGAGGATGAATATGAAAAATTTGATGTTAAGTCTGGTTTTTCATCTAAGAACTGCGAGGAAAAGTACGTCCATTTAAAGCGCCGGTTTCATGACGACGAAGACGACGACGATGGTGTGTTGCGTATGGTGGAGGAATTACGAAAGCTTCGCGTTGAAGAACTTAAGCGTGAAGTTCATCGTCATGATGTTTCGATCGTGTCGTTGCAATCGAAAGTGAAGAGATTAATGGAGGAGAGGGATAACAGTAAGGTAAAAGAAGAACAAGCAGATCTGACGATTGAACCGGTGGAAAATATTAGAGAAAAACTCGAAGAATTTGAAAGATCTTCGCAAGAAAAAGTAATTACCGGTGACTCGGCTGAGAACCGGTCGTGGAACGAGTCGAACTCGACAAGCCACCACCACCACCACCACGACGTCAAAACCGACACCACACAAGCGGTTACAGAGGAGAGAGAATCAAAATTGAAGCGTGAATCGGACGAGCCAGATCCGGTTCAATTAGAGAAGAAATCGTTTAGGGAGTGGAAAGTGAGTCGACTCACTGAGTCATTATCCGAGTCGAGAAGAGGTTTATCCGAGTCGAGAAGAGGTGAAAGTTTGAAGCAACAGAGCAGTGACGTTCAAAGCTGCGCTAGTTTGTCGAAGAAAAAACGACGTCGTTTCGGTAGAGGAGGAGGAGATAATAGTACTGATGAGTTTGAGGCAGAGGAGCTATCTCCCGCTAATAAGCGGATCAACGCAAAATCTCAACCATTGATTCGTTTTCTGGAGATCCTCAGGTCACATAAACACGGCTCTGTTTTCCAGCGTCGAATTCCTAGTCAGGAAACTGAAAAGTACCGAAATGTGATCCGTCAACACATGGATCTGGATACGGTTCAATCCCGACTTGATAAAGGTATTTACAGCGATTGTCATCCCAAGTTTTACCGTGATCTTCTCCTCATTTTCACCAATGCAGTTCTTTTTTACCGTAAAAGCTCTGCAGAGCATTTAGCTGCAAGAGAATTGCGAAGATTTGTAATCGATGAAATTACCCGGAAAAACCCTAAACCCAAAATTCAACCAAGGAAACCCGACCCAGATCCACAACAGCTTGAACCCATAGTTAAGAAACCTAGATCCACTACCATGGTTGTCTGCCGGAGGCGGATATCCGGCTCAATCCAAGCATTATCTGATAGTCTAAAGAAGGGAGATTCAAACAATGTTACTAATACTAGTACGAATAATTTTAGTAAGAGTAATAGTAGTAGTAAATTGGAGAATAATGGTCGCGAAGAGAAGATAATGCATGATAATGTTCAAAAGAAATCGAATAATAATGGTGATAATGGTGATGTTGATAGAAATTTGAAGAAATCGAATTTGGTCAACGGAGGTTTGAGGTTGAGTAATAATAATGATAAGAAGATTATAAGCAAGAATTTGAGGGATCAAAAACAAGAGAAAAATAGTTCTTCAAGTCTTTTGAAGAAACAGGGGGTGGCTAATTTTTTAAAAAGAATGAAGCAAAATTCGCCTGTAAGTCAAGAAAAGATGAAGAATAATGAGGAGGAAGATGAGGAGGAGAAAAATGGTGGTAATGGAAATGGTAAGAAGACAAATGGGAGTGGGAGTGGGACCCACAGGAGAAATGTTAAAGAGGAGGTTGAAGTTTGTGTGACGAGGAGGAGGAGTAGTGGTAGGAAAGGAGAAAAAGATTCGACTGATGAAGCTTCTAGAAGAGCCATTGGTAGACCTCCTAAGAGAAAGGCGGCAATGGGGAGTGGTGGAATAACGGTTACTAGTAAAGGAGGAAGAAGTGGTGGTGCTTTGTAG
Protein Sequence:
- >AHYPO_021125-RA|Amaranthus_hypochondriacus|MYB_related|AHYPO_021125-RA
MNEKEKYDETTSSNNENLRTKMPENEGEQTWGVLEELLLVCAVNRHGTDSWDSIANELQKRIKHSSSHNEDEYEKFDVKSGFSSKNCEEKYVHLKRRFHDDEDDDDGVLRMVEELRKLRVEELKREVHRHDVSIVSLQSKVKRLMEERDNSKVKEEQADLTIEPVENIREKLEEFERSSQEKVITGDSAENRSWNESNSTSHHHHHHDVKTDTTQAVTEERESKLKRESDEPDPVQLEKKSFREWKVSRLTESLSESRRGLSESRRGESLKQQSSDVQSCASLSKKKRRRFGRGGGDNSTDEFEAEELSPANKRINAKSQPLIRFLEILRSHKHGSVFQRRIPSQETEKYRNVIRQHMDLDTVQSRLDKGIYSDCHPKFYRDLLLIFTNAVLFYRKSSAEHLAARELRRFVIDEITRKNPKPKIQPRKPDPDPQQLEPIVKKPRSTTMVVCRRRISGSIQALSDSLKKGDSNNVTNTSTNNFSKSNSSSKLENNGREEKIMHDNVQKKSNNNGDNGDVDRNLKKSNLVNGGLRLSNNNDKKIISKNLRDQKQEKNSSSSLLKKQGVANFLKRMKQNSPVSQEKMKNNEEEDEEEKNGGNGNGKKTNGSGSGTHRRNVKEEVEVCVTRRRSSGRKGEKDSTDEASRRAIGRPPKRKAAMGSGGITVTSKGGRSGGAL*