Information report for AHYPO_018261-RA
Gene Details
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Functional Annotation
- Refseq: XP_021772928.1 — protein ALWAYS EARLY 2-like isoform X1
- TrEMBL: A0A0K9RR56 — A0A0K9RR56_SPIOL; Uncharacterized protein
- STRING: XP_010674727.1 — (Beta vulgaris)
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Beta vulgaris: Bv4_081320_zcno.t1
- Glycine max: Glyma.10G153800.9.p, Glyma.10G153800.8.p, Glyma.10G153800.7.p, Glyma.10G153800.6.p, Glyma.10G153800.12.p, Glyma.10G153800.10.p, Glyma.10G153800.22.p, Glyma.10G153800.21.p, Glyma.10G153800.20.p, Glyma.10G153800.19.p, Glyma.10G153800.18.p, Glyma.20G234500.2.p
- Malus domestica: MDP0000293437
- Manihot esculenta: Manes.09G168000.1.p
- Prunus mume: XP_008246394.1, XP_008246395.1, XP_008246392.1
- Prunus persica: Prupe.6G323800.4.p, Prupe.6G323800.2.p, Prupe.6G323800.6.p, Prupe.6G323800.3.p
Sequences
CDS Sequence:
- >AHYPO_018261-RA|Amaranthus_hypochondriacus|MYB_related|AHYPO_018261-RA
ATGGCACCGTCAAAAAAGTCAAAAAGTGTAAATGGAGGATTTGCTTCTGCTAGTGATTCATCTCCAAGCAAAGATGATAAATCAAAGCAGAAGAAACGTAAGTTATCTAACTTGCTCGGACCACAATGGAGTGAACATGAGATTGAACGCTTTTACGAAGCTTATAGGAAACATGGCCAAGATTGGAAAAAGGTTGCTGTCAGTGTGCGATCTAGATCCATTGAAATGGTTGAAGCTCTTTATAGTATGAGTCGGGCATACTTGTCTTTACCGGAGGGGACAGCTTCTGTGCATGGATTCAAAGCAATGATGATTGATCACTATAATGCCCTGGAAGGAAGTGATAGTGAAAAAGCCACCAAGGAGCCTGAAGTTATAGCTCGTAAATTTAAGAAAATTCCTAAAACAAAAGTTTTGATCGACTCATCCAGAGATGATGCCAAGCACAAGCCTGCTGGCTCAAGTCATGGATGCCTAGCCTTATTAAAAAACAAAGGTGATGATAGCTTTCCGCATATTCCTGTGAAAAAAAGGACACCTCGTGTTCTTGTTTCATTGTTTTCAAATAAAAAGTTTGAAGTAGCAGGAACGAATGCAATTGAAGATGGCTCACAAACAACATACCAAAAAATAGGGCATATGAGAACCTTACAGGTCTCAGATAAAGAAGAGTTGATTTCGCCATTTCTAGCAGCGAAGGGTAAAAATGGTGTATATGCAGCACCTGAAGAATCTAAAGAAGATAGGTTGGCCCGCAATGTAGCAAAAATAGGAAATCTGGCTAGGAATTCAATGCATCCAGGTACATCCGCATTAGCAGCTGAGTATAAGAATGGGGAGAAAAGAAAGAAAGAGGAAGTTCAGCAGTCTGAAGCTTTGTTTTTTGATAATATTCAGAAAACATATGATCATTCAAACAGAGGAACAAAAAGAAACAACTATGATGATGAACTAGCAGCATGTGATGCACTGCAAACCTTGGCTGAAATATCTGCAATGATGCCCTATATTGCTAAAGAATCTGTTAAGGATGCTGAAGAATCCATGATTGGATGGAACACAACTGTTAATCCGGTGGCTCGTAGCAATGTTACATTAAGTAATGAGAAAATGAAAGGGGAGTCAAATAAGAAACATAACCAAGCTTCAAATGTGAATCAGAAGGCTGAAAGTCTGATTAATTGTTCAAGAAAGTCATCCAAAAATGAGACTGCGGTGAATGAGGAGGTGAAGTCTGCAGATAGTAGTGGGAAAGTATCTGGTATCTCCATCAGATGTAAATCATCAGATAGGTCTCCGCACTTGTCTTTAAGCAATGACTCACATTCAGGAGACATAGAAGCTGCTGTTTCCAGCACACAAATGGATACCGCTGGCTACATTATTATTCCCACAAAGAAAAGTAGGCGCAAGAGAGACCGAACATCACATTTCAAGAACACATATAATGCTCCAAATGGTTGTTCGGGTACAGGTTTACCTGTACTGCAAAATAAATTGCAGGATGGTGAGGGAATGCTTTTGCATTGTCTCTCCTGGCCTGAAGCACGCAGATGGTGTGTGTATGAATGGTTTTACAGTGCCATTGACTACCCTTGGTTTGCTAAAAGAGATTTTATGGAGTACCTAAATCATGCTGGATTGGGACATATTCCAAGACTCACTCGTGCTGAATTGGGTATTATTAGAGGTTCACTTGGCAAACCTCGAAGATTTTCTAAATGTTTTCTACAGCAACAGAGGGAGCGCCTTAATTATTATCGTGAATCTGTCAGGGATCATTATGTCAATTTTCGAGCTGGTCTTGGAGAAGTTCCGACAGACTTACTATATCCTTTACGTGTTGGACAACAAGTAGTTGCTATTCATCCAAAAACAAGAGATTGCCATAATGGCAAAGTTCTATCAGTTCAACGTGATAACTGCTTGGTCCAGTTTCATTGTCCTGACCTTGGGGTTGAAGTAGTTCTGGATATTGATTGTATGCCTTTGAATCTATTGGAGAATATGCCAGAAGCTATGAGAAGGGAGAGGATGCAATTTGATCACAGGCACATACAAGTTTCTAAAGCCAATGGATCCATTGTTTCAGCGCCAATGGAACATATGATTAATGTTGATCCCCATTTGTCTGTTCCTCCTAGAAGTCTCACAACTGCAAATGATATAAAGGTTAAGCCATCATTTTCAAATTCACTTACTAAGGTAGCAGCCAATGGAAGTATAAAGACACAATCAGCAACCCAAAATCAATCTTGCAGTTTTGTTCAAATACACTCGCAAGAGGGTTATATGAGAAATGTTCCAGAATTTAAAGAAGGCTTAGATAGAAAGGTCTATGAGCAGCTTAATGGTTGTTCAGAAAACCTGCCTTTGAATTCAGTTGGTTTGAATGGAAAAATGCATTCTTCACATAATTCTTCTCTCTGCTGTCAAGAAATTGCATCTAATGTGGCTGGTATCGTAGAAGATTCTAGAAAAAAAGCACTAAAACTGGTAGATACTGCTATTAAGGAGATAACCAGTAAGAAAGAAGGCGATGATAAGTTTCGAAGGATTAGTGAGGCTTTGGATCGCAATGGAAAAGCAGAATGTGCAAGTAATTGTGGAACATCTATGACAATGTCTTCAAACGAAATTCAAGGAAGTTTGCCTCACCAGAACCCAACAATTTCTTGCAGTTCAGATCCTCAACTGGCATGTGATATGATTAGTTCGCAGTCAGCTGGTGATTCTGATCTTGAAGTTCCTTCTGACCTTATAACATCTTGCGTTGCTACTGTGCTTATGATACAGACTTGCACTGAGAGACAACATCCACCTGCAGAAGTTGCACAGATATTAGATAATGCGGCGACGAGCTTACATCCTTGCTGCCCTCAGAATCTGTCAATTTACAGGGATATACAAATGTGCATGGGAATAATTAAGACCCAAATTTTAGCTCTGGTACCAACATAA
Protein Sequence:
- >AHYPO_018261-RA|Amaranthus_hypochondriacus|MYB_related|AHYPO_018261-RA
MAPSKKSKSVNGGFASASDSSPSKDDKSKQKKRKLSNLLGPQWSEHEIERFYEAYRKHGQDWKKVAVSVRSRSIEMVEALYSMSRAYLSLPEGTASVHGFKAMMIDHYNALEGSDSEKATKEPEVIARKFKKIPKTKVLIDSSRDDAKHKPAGSSHGCLALLKNKGDDSFPHIPVKKRTPRVLVSLFSNKKFEVAGTNAIEDGSQTTYQKIGHMRTLQVSDKEELISPFLAAKGKNGVYAAPEESKEDRLARNVAKIGNLARNSMHPGTSALAAEYKNGEKRKKEEVQQSEALFFDNIQKTYDHSNRGTKRNNYDDELAACDALQTLAEISAMMPYIAKESVKDAEESMIGWNTTVNPVARSNVTLSNEKMKGESNKKHNQASNVNQKAESLINCSRKSSKNETAVNEEVKSADSSGKVSGISIRCKSSDRSPHLSLSNDSHSGDIEAAVSSTQMDTAGYIIIPTKKSRRKRDRTSHFKNTYNAPNGCSGTGLPVLQNKLQDGEGMLLHCLSWPEARRWCVYEWFYSAIDYPWFAKRDFMEYLNHAGLGHIPRLTRAELGIIRGSLGKPRRFSKCFLQQQRERLNYYRESVRDHYVNFRAGLGEVPTDLLYPLRVGQQVVAIHPKTRDCHNGKVLSVQRDNCLVQFHCPDLGVEVVLDIDCMPLNLLENMPEAMRRERMQFDHRHIQVSKANGSIVSAPMEHMINVDPHLSVPPRSLTTANDIKVKPSFSNSLTKVAANGSIKTQSATQNQSCSFVQIHSQEGYMRNVPEFKEGLDRKVYEQLNGCSENLPLNSVGLNGKMHSSHNSSLCCQEIASNVAGIVEDSRKKALKLVDTAIKEITSKKEGDDKFRRISEALDRNGKAECASNCGTSMTMSSNEIQGSLPHQNPTISCSSDPQLACDMISSQSAGDSDLEVPSDLITSCVATVLMIQTCTERQHPPAEVAQILDNAATSLHPCCPQNLSIYRDIQMCMGIIKTQILALVPT*