Information report for AHYPO_008816-RA
Gene Details
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Functional Annotation
- Refseq: XP_010667784.1 — PREDICTED: protein ALWAYS EARLY 3 isoform X1
- TrEMBL: A0A0J8DWA1 — A0A0J8DWA1_BETVU; Uncharacterized protein
- STRING: XP_010667784.1 — (Beta vulgaris)
- GO:0005730 — Cellular Component — nucleolus
- GO:0016592 — Cellular Component — mediator complex
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Beta vulgaris: Bv_012080_sqjh.t2, Bv_012080_sqjh.t1
- Citrullus lanatus: Cla021725
- Cucumis sativus: Cucsa.253300.3, Cucsa.253300.1
- Gossypium arboreum: Cotton_A_04877_BGI-A2_v1.0
- Gossypium hirsutum: Gh_A02G0465, Gh_D02G0520
- Manihot esculenta: Manes.15G014400.1.p
- Petunia inflata: Peinf101Scf02339g04016.1
- Prunus persica: Prupe.1G139300.6.p, Prupe.1G139300.1.p, Prupe.1G139300.5.p, Prupe.1G139300.2.p
- Ricinus communis: 29726.m004015
- Sesamum indicum: XP_011071462.1, XP_011071461.1, XP_011071460.1, XP_011071459.1
Sequences
CDS Sequence:
- >AHYPO_008816-RA|Amaranthus_hypochondriacus|MYB_related|AHYPO_008816-RA
ATGGCTCCTACAAGAAAGTCGAGAAGTGTCAATAAGCGGTTTCCATATCCTAGTGAGATCTCTCCTTCAAAAGATGGAGAAAGTGCTAATAAAAGTAACAAAAGGAAAAGGAAGGTGTCTGACATGCTAGGGCCACAATGGAGCAAGGAAGAGCTTCAAAGTTTCTATGAGGCATACCGCAAGTATGGGAAAGATTGGAAAAAGGTGGCTACTGCAATACGTAATCGGACTATAGAAATGGTGGAGGCTCTTTATACTATGAACAGGGCTTATTTGTCTCTTCCGGAGGGAACAGCTTCTGTTGTTGGTTTAATAGCGATGATGACTGATCATTATTCTGTTCTGGAGGGAAGTGATAGTGAACAAGAGAGCAATGATGGTGTTGAAATACCACGAAAACCTCAGAAGCGTACACGTGGAAAATTACATCCTAACATGGCTGGGAACTTTTCAGATGTGTCACATTCCCAGTCAGTTGCTTCAAGTTATGGCTGTTTGTCTCTCTTAAAGAAAAAACGGTCTGGGGGAAATCAACCAAGAGCAGTTGGAAAAAGGACACCACGCGTTCCTGTAAGATATACATATGATAAAGATAACATTGGGAGGTATATTTCCCCAGTTCGGCAGGGGTTAAAAAAGTTAGATGTTGCTGATGAAGATGTGGCTCATGAGGTGGCATTAGCGTTGGCTGAGGCATCCCACAGGGGTGGCTCTCCTCAGATCTCTCAGACACCAAATAAAAGAAGAGAAGTTACTTCAAAATTACCTGTTGGTGAAAGATTGTGCTCCGAATCAGAAATGACAAGCGCAAAAAATATTGGAAATGAAGTGAATGATGATGGGTGTGAAGGAAGCTTGGGAAGCACTGAAGGGGATAACAATTTTTCTAGGGAGAAGCGTCAGTCTGGTGCTAGGAAAGGTGTTGGTACAGTTGCTCAACAGAAAGCAAAGAGGTCTTACGGGAAGAAAGTAGAAGTCGAAGATTCTGAACACCAATATGGGGATGATATAAAGGAAGCCTGCAGTGGTACAGAAGGAGGACAAAAGTACCCTAGTTTCGAATTAAAACTTGGTCCTGACACAAGAGATTTGATTTGTACTCGATCATCAGGTCAAACCTCTAAAAAGAGGAGCAAAAAGGTCCTTTTTGGTGGAGATGAAGGTGTAGCGTTGGATGCCCTGCAAGCTTTGGCTGATCTGTCATTATTGATGCCATCTTCTACAGCTGAAGCAGAGTCAACTGTGCCAATCAAAAAGGAAAACGAAGTCGATGTTGACAAATTCAAGCAACCAGACACTGTAACTACAAGTCTGAGGGTAAAACCAAAAGCTTCACCATCTAAGAAGAAGGGAGACCAATCCGTTCCTCAGTCTCGTGGTTCTGAGTCCACAAAATATAAACCAGGAAAAGCTTCTTCCCCTAACTCAAGTCCTGTAACTGAACCAAAAGACTCAAACGCGCGAAAAAGAAAATCAAAGCCTTCTGTGTCTAGAAATGCTACCTCCGAGTTTCGAATGCACTCAGATGCTAATGCTGTGCCGGAAATGGAGTTCTCAGATCAGGGTGTGAAGTCAGTTTACAAAAGTCGACGGCTTTCACATAATGCTTCCCAGCAGCTTGGGCAATTGGTCAGAATCGCGGAACACTCTTCTTCAAGTACCGATATTAGAAAGGATGTAGATGATTCTGCAATATCATCCATACAGGCTTCTGAACTCACCAAGATCAACGCACCAACCAAATCTAGAAGCAGGCGTAAAATGGACAAATCACTGATCATAAAAGCGGACACTTTTGTCAATGAACAACCTAACATATCTGAGCAGTTCTACCATGATAAGACAATGCATCCCAAGGAAAGGCTTTGTAATTGCCTGTTGAACCACAGTGTCAGAAAATGGTGTATATATGAGTGGTTTTACAGTGCAATTGACTACCCTTGGTTTGCTAAAAGTGAGTTTGTGGAGTATTTGTATCATGTGGGTTTGGGCCATGTCCCTAGATTGACCCGTGTTGAATGGGGTGTCATTAGAAGCTCACTGGGAAAACCACGGCGATTTTCCGAGCAGTTCTTGAAGGAAGAAAAGGAAAAACTTGCTTACTACCGGGAATCGGTGAGGAGTCACTATACTGAATTGCGCATGGGAAAGAGAGAAGGACTTCCAACTGATTTAGCTCGTCCCTTAACAGTGGGTCAGCGTGTTATAGCAATTCATCCTCGGTCAAGAGAGATTCATAATGGAAATGTACTGACAGTTGATCATAATAGATGTCGGGTTCAGTTTGATAGGCCAGAACTAGGAGTTGAATTCGTCAAGGATATCGACTGCATGCCATTATACCCATCAGAAAATATGCCTACATCTCTTTTACGACACAATGCTTGTAATGATAAGTTTTGCGAGGCTTTAAAGCAGTTTAGCGCAAGTCAGAGATCTTCAGATAGGATGAAGGAAGAAAACATAATAATTGACCCCAGCCAAAAAGTGGGAAGTGTAGAAGGTCCTTCAAATGTTTCTCCTATTTATGTGATGAGTAATCTACCAAAGCAGGCTAAGGAGGGTTATGTAAGTCCAATGTCACACAAAAAGAATGGTCATATTGAAGTAATCAGTCCCCAGCAAGCACTGACTTTGCAGCAGTCTTCTGGCTCCCCGATGCAAACAAAGGAGGCAGATATCCGGGCTTTGGCAGAACTGACCCGCGCTCTTGATAAAAAGAATGCACTGGTGACTGAACTAAAGCGCATGAATGACGATGTTTCTGAAGACAACACACTAAAAAATGTGGATTCTTTCAAGAAGCAATATGCAGCAGTACTGGTTTCCTCTGCGCTGATATGTTTGAGACAGCGGAATACCTATCAAGGGAACTCTCTAGTTCCGTGGCAGAAGACAAAGATAAGTTTAGAAGATCATGGTAACATTGTTGGGTCTGTTGGTCCATTAAATGGCTTGCCAGGCAATACCCAAGGGACAGGTTCACATGCATGTGAGATCGTTGACACTTCAAGAATAAAAGCCCGAAGGATGGTTGATGATGCACTTCAGGCAGTGACATCTCTGAAGGTAGAGGTAGATTCTGTTCAAACGATTGAAGAGGTAATAGACTTTGTGAATACTAGACTTTTGGTTGATGATTCTGGCATACCAACACAAACGTCTCAACTTAACGGAAGTGCAACTCTTCAGAACCAGTCAAGCTCGTGCACTTCAACTGTGGTGAATTCTGATCTAGCACTTGATTCAAAGTCAAATTGTGCATCTGTTCGATGTGAACTACACATTCCGTCGGAGCTCATTGCAAACTGTGTTGCTACCCTGCTGATGATTCAAAAATGTACAGAGCGTCAGTTCCCACCAGCTGAGGTTGCCCAGATATTAGACCTTGCAGTCACAAGTTTGCAACCACGCAGTTCACAAAACATTCCAATCTACACCGAGATCCAGAAATGTATGGGAATCATTCGGAGCCAGATATTGGCGCTTATCCCTACTTAA
Protein Sequence:
- >AHYPO_008816-RA|Amaranthus_hypochondriacus|MYB_related|AHYPO_008816-RA
MAPTRKSRSVNKRFPYPSEISPSKDGESANKSNKRKRKVSDMLGPQWSKEELQSFYEAYRKYGKDWKKVATAIRNRTIEMVEALYTMNRAYLSLPEGTASVVGLIAMMTDHYSVLEGSDSEQESNDGVEIPRKPQKRTRGKLHPNMAGNFSDVSHSQSVASSYGCLSLLKKKRSGGNQPRAVGKRTPRVPVRYTYDKDNIGRYISPVRQGLKKLDVADEDVAHEVALALAEASHRGGSPQISQTPNKRREVTSKLPVGERLCSESEMTSAKNIGNEVNDDGCEGSLGSTEGDNNFSREKRQSGARKGVGTVAQQKAKRSYGKKVEVEDSEHQYGDDIKEACSGTEGGQKYPSFELKLGPDTRDLICTRSSGQTSKKRSKKVLFGGDEGVALDALQALADLSLLMPSSTAEAESTVPIKKENEVDVDKFKQPDTVTTSLRVKPKASPSKKKGDQSVPQSRGSESTKYKPGKASSPNSSPVTEPKDSNARKRKSKPSVSRNATSEFRMHSDANAVPEMEFSDQGVKSVYKSRRLSHNASQQLGQLVRIAEHSSSSTDIRKDVDDSAISSIQASELTKINAPTKSRSRRKMDKSLIIKADTFVNEQPNISEQFYHDKTMHPKERLCNCLLNHSVRKWCIYEWFYSAIDYPWFAKSEFVEYLYHVGLGHVPRLTRVEWGVIRSSLGKPRRFSEQFLKEEKEKLAYYRESVRSHYTELRMGKREGLPTDLARPLTVGQRVIAIHPRSREIHNGNVLTVDHNRCRVQFDRPELGVEFVKDIDCMPLYPSENMPTSLLRHNACNDKFCEALKQFSASQRSSDRMKEENIIIDPSQKVGSVEGPSNVSPIYVMSNLPKQAKEGYVSPMSHKKNGHIEVISPQQALTLQQSSGSPMQTKEADIRALAELTRALDKKNALVTELKRMNDDVSEDNTLKNVDSFKKQYAAVLVSSALICLRQRNTYQGNSLVPWQKTKISLEDHGNIVGSVGPLNGLPGNTQGTGSHACEIVDTSRIKARRMVDDALQAVTSLKVEVDSVQTIEEVIDFVNTRLLVDDSGIPTQTSQLNGSATLQNQSSSCTSTVVNSDLALDSKSNCASVRCELHIPSELIANCVATLLMIQKCTERQFPPAEVAQILDLAVTSLQPRSSQNIPIYTEIQKCMGIIRSQILALIPT*