Gene Details:

  • Gene ID: AHYPO_008240-RA
  • Gene Family: MYB_related Family
  • Description: MYB_related Family protein
  • Species: Amaranthus hypochondriacus
  • Source: MYB_related family gene from PlantTFDB

Protein Features:

Annotation Proteins:

  • Refseq:  XP_021850159.1  — RNA polymerase I termination factor-like
  • TrEMBL:  A0A0K9RAV4  — A0A0K9RAV4_SPIOL; Uncharacterized protein
  • STRING:  XP_010692728.1  — (Beta vulgaris)

Gene Ontology:

  • GO:0003677  — Molecular Function — DNA binding

Family Introduction:

  • A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.

Literature:

Sequences:

CDS Sequence:
  • >AHYPO_008240-RA|Amaranthus_hypochondriacus|MYB_related|AHYPO_008240-RA
    ATGGCCATGAGTAATGAGGGTGATGCGTTTATCAGTGTGAAGAAGAAACATAAGAAACTGAAAAACAGTAAGATGAATAGTACAGGAGTAGAAGATGATATACAAATTGTTGATGAAGCCCACTCTAAAAAGAAGAGGAAAACCAAGGTTGTGAGTAATATTTCGAAGGATGTTTCTGATGTAGAGATTGGTGTGCAAATGGATAAAAGTTGTAAAAAAGATAAGAAAAAGAAGGATAAAAGTAGAAAAGATGTGTCTGCTCAAGGGAATGACGACGAAATTGAGAGTAACATCAAGAAGAGTAAAGCTGGAGAAAAGGGAAGGGCTTCTAATTTTTCAGAACATGCTGGTGGTAATGAGGAGTCTCTGAATTTGGGGGTTAATGACTTAGGTTCGAGTAGAAAAAAGAGAAAACATTCTTTAAAAAATGATACCGAGAACTTGGAAGATAAGGGAAAAGAGCTACATGCTAGAGAAGAAGAGTATCCGAAGAAAAAGAAGAAGAAGATAAAACACAAAGATGGAAAGAGTACAGATGATAATGCTCGTGATGCTAGTGGCGGAGATTTCAATGATAGATGCATTAAAAGGAAGAAAAAATCGGTTGAATCGAGTATGAATGGAGGGGTCAATGCCAGTGCTTTAGAAACACGAGATGCTGATTTGGTTGAACATCATATTAGTGATGAGATTATTGGAAACGATCGGAATGTGAAGGACAAGAAGAGAAAAAAGAAAAACAAGGATGATTCGTATGAGCATAACAGTGAGAAAAGCAGGGATAGGAGCAGTTCAAAGAAGAAAAAGAAGAAGAAGCACTCCATTGGGTCTAATACTGTAGAAGATTTACATCCTGCTGCATTAGAGAATAATGAGAACAGTAAAACTGTTGATCCTTCTGAAAATTCCAATAGCAGTAAGAAATCAAAAAGAGTAAAGTTCTCTGATACTGTAGAAGTTTTCCCCCTTCCGGACAATTCTAGCAAAGGGAAGAAGAGGAAAGGTGAAGATGACATTAAGGAGAAGAAAGTTGCTGATGATGGCTTGGTACGAGGCAAGCGATTCTCGAAAGAAGAAGATAAGATGGTCCAAGATGCTGTATATAAGTATATTGATGATCACAATCTGGGTGAACAAGGTTTAGAAATGGTCATGAAATGCAAGTCCTACGCAAAAGTGAGAGACTGTTGGAAAGAAATTGCGCAAGCTTTGCCTCATAGACCTTATGTGTCTGTCTATTGCCGTGCTCATATATTGTTTGAACGAAGTGACACCCGTGAGTGGACCCCAGAAGAGATTGAGCTTGTCTTGAAATCTTATGAAAAACTTGGTTCAAATTGGAAAAAAATTAGTCTTGAACTCGGTAAGAATCGAATTCATGTAAAAGATGCCTGGCGTAGGTATAAACATCCCGATCTGAGATCGGGAAAGTGGTCTCAAGAAGAGTACCAGAATCTTTTCAATCTTGTCAACATGGATCTGGCTATGAAAGCATACACTGAAAAGAAAACAAAGTATGGTATGTTGCGAGATAACATAAGCTGGGGGGCCATTAGTGATCGGATTTCAACACGAAGCAATGCTCTTTGTTGCATGAAATGGTATAGGCAATTAAGATCTCCCATGGTAGATGACGGTTTGTGGTCCGATGTCGATGATTATAGGATGTTGATTGTCCTTGCTGAGCTTGATGCTTTTTGTGAAGAAGACGTGGACTGGGATAACCTTCTGGAACATCGGTCTGGGGATATATGTCGTAGACGATGGAGTCAAATGGTACGCCACATTGGCGAGTTTGGTACCAAACCATTTAATGAGCAAGTTGAAATTCTTTCTCAAAGATATTGTCCCAATCTTTTAGAAGCTAGAGAGGCTTATGAAAACAAAGTTCCTGTTGATTAA
Protein Sequence:
  • >AHYPO_008240-RA|Amaranthus_hypochondriacus|MYB_related|AHYPO_008240-RA
    MAMSNEGDAFISVKKKHKKLKNSKMNSTGVEDDIQIVDEAHSKKKRKTKVVSNISKDVSDVEIGVQMDKSCKKDKKKKDKSRKDVSAQGNDDEIESNIKKSKAGEKGRASNFSEHAGGNEESLNLGVNDLGSSRKKRKHSLKNDTENLEDKGKELHAREEEYPKKKKKKIKHKDGKSTDDNARDASGGDFNDRCIKRKKKSVESSMNGGVNASALETRDADLVEHHISDEIIGNDRNVKDKKRKKKNKDDSYEHNSEKSRDRSSSKKKKKKKHSIGSNTVEDLHPAALENNENSKTVDPSENSNSSKKSKRVKFSDTVEVFPLPDNSSKGKKRKGEDDIKEKKVADDGLVRGKRFSKEEDKMVQDAVYKYIDDHNLGEQGLEMVMKCKSYAKVRDCWKEIAQALPHRPYVSVYCRAHILFERSDTREWTPEEIELVLKSYEKLGSNWKKISLELGKNRIHVKDAWRRYKHPDLRSGKWSQEEYQNLFNLVNMDLAMKAYTEKKTKYGMLRDNISWGAISDRISTRSNALCCMKWYRQLRSPMVDDGLWSDVDDYRMLIVLAELDAFCEEDVDWDNLLEHRSGDICRRRWSQMVRHIGEFGTKPFNEQVEILSQRYCPNLLEAREAYENKVPVD*