Gene Details:
- Gene ID: Achn183551
- Gene Family: MYB_related Family
- Description: MYB_related Family protein
- Species: Actinidia chinensis
- Source: MYB_related family gene from PlantTFDB
Protein Features:
- Gene3D: G3DSA:4.10.60.10
- PROSITE profile: PS51294
- SuperFamily: SSF46689
- TIGRFAMs: TIGR01557
- SMART: SM00717
- Gene3D: G3DSA:1.10.10.60
- Pfam: PF00249
- InterPro: IPR001878 IPR017930 IPR009057 IPR006447 IPR001005
Annotation Proteins:
- Refseq: XP_028076682.1 — LOW QUALITY PROTEIN: transcription factor MYB1R1
- Swissprot: Q9LVS0 — KUA1_ARATH; Transcription factor KUA1
- TrEMBL: A0A2R6RF72 — A0A2R6RF72_ACTCH; Transcription factor MYB1R1 like
- STRING: VIT_01s0026g01050.t01 — (Vitis vinifera)
Gene Ontology:
- GO:0009651 — Biological Process — response to salt stress
- GO:0009723 — Biological Process — response to ethylene
- GO:0009733 — Biological Process — response to auxin
- GO:0009737 — Biological Process — response to abscisic acid
- GO:0009739 — Biological Process — response to gibberellin
- GO:0009751 — Biological Process — response to salicylic acid
- GO:0009753 — Biological Process — response to jasmonic acid
- GO:0031540 — Biological Process — regulation of anthocyanin biosynthetic process
- GO:0046686 — Biological Process — response to cadmium ion
- GO:0080167 — Biological Process — response to karrikin
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
- GO:0003682 — Molecular Function — chromatin binding
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
- GO:0008270 — Molecular Function — zinc ion binding
Family Introduction:
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature:
- A novel leaf-specific myb-related protein with a single binding repeat. DOI: 10.1016/s0378-1119(96)00521-5 ; PMID: 8996094
Sequences:
CDS Sequence:
- >Achn183551|Actinidia_chinensis|MYB_related|Achn183551
ATGTCTCGCCTGTGTTCGCAGTGTGGAAACAACGGCCACAACTCGCGCACGTGCCCGGATGCTAGCGGCGGCGGAGTTGCCGGCGACGTCACTGGCTCCGGAAACGGCATCATGTTGTTTGGCGTTCGGCTCATGGAGGGAGGATCCTTCAGGAAGAGCGCTAGCATGAATAATCTCGCTCAGTACGAGCAGCCTGAGGACGATGTAGCCGCCGGCTACGCCTCTGACGACGTCGACGCCTCTGATAGAAGCCGGGAGCGCAAAAGAGGAGTGCCGTGGACGGAGGAAGAGCACAAGCTGTTCTTGTTAGGGTTGCAGAAGGTAGGGAAAGGGGACTGGAGGGGGATTTCGAGGAATTTCGTGAAGACTCGTACACCGACTCAGGTGGCGAGCCATGCTCAGAAGTATTTTCTCCGCCGGACCAACCGCAACAGGAGGCGCCGCCGATCCAGTCTCTTTGATATCACCACCGATACGTACATGATTTCAACAATCGAAGAAGATCAAATTCAGCAAGAAACCATGTCACATCCACATCTCAACAACCACCTCAAAGGATTTCCGGTGATCTCAACTTTTCCGGCGGTGTTACCGGTCACTGGAGACAACTCTGTTGACAATCTCGCTCTAGGACACATTAACGAAGCCAATTGTTCTCCCAATCTCATCCGTCCGGTACCTGTTCCTCCGTCTTCAAAAATGGCAGATCTCAATTTGAACCACACACCAACCGGGGACCCCTTGCCTTTATCTCTGAAGCTATCCACATCACCGTCGGATCAGAATCCACCGCCGGCGAGACACGTGTCGGCTTTTCAGGCCATGTCCGGTGGTTTCAACAGTGGGAGTAGTGGGGAAAGCATCATCAGCGTTGCTTGA
Protein Sequence:
- >Achn183551|Actinidia_chinensis|MYB_related|Achn183551
MSRLCSQCGNNGHNSRTCPDASGGGVAGDVTGSGNGIMLFGVRLMEGGSFRKSASMNNLAQYEQPEDDVAAGYASDDVDASDRSRERKRGVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRTNRNRRRRRSSLFDITTDTYMISTIEEDQIQQETMSHPHLNNHLKGFPVISTFPAVLPVTGDNSVDNLALGHINEANCSPNLIRPVPVPPSSKMADLNLNHTPTGDPLPLSLKLSTSPSDQNPPPARHVSAFQAMSGGFNSGSSGESIISVA*