Gene Details:
- Gene ID: Achn121951
- Gene Family: MYB_related Family
- Description: MYB_related Family protein
- Species: Actinidia chinensis
- Source: MYB_related family gene from PlantTFDB
Protein Features:
- Gene3D: G3DSA:4.10.60.10
- PROSITE profile: PS51294
- SuperFamily: SSF46689
- TIGRFAMs: TIGR01557
- SMART: SM00717
- Gene3D: G3DSA:1.10.10.60
- Pfam: PF00249
- InterPro: IPR001878 IPR017930 IPR009057 IPR006447 IPR001005
Annotation Proteins:
- Refseq: XP_028107630.1 — myb-related protein 306-like
- Swissprot: P81392 — MYB06_ANTMA; Myb-related protein 306
- TrEMBL: A0A2R6PRU3 — A0A2R6PRU3_ACTCH; Myb-related protein
- STRING: VIT_14s0108g00830.t01 — (Vitis vinifera)
- STRING: EMJ10475 — (Prunus persica)
- STRING: XP_009594207.1 — (Nicotiana tomentosiformis)
Gene Ontology:
- GO:0001666 — Biological Process — response to hypoxia
- GO:0009617 — Biological Process — response to bacterium
- GO:0009626 — Biological Process — plant-type hypersensitive response
- GO:0009723 — Biological Process — response to ethylene
- GO:0009733 — Biological Process — response to auxin
- GO:0009739 — Biological Process — response to gibberellin
- GO:0009751 — Biological Process — response to salicylic acid
- GO:0009753 — Biological Process — response to jasmonic acid
- GO:0042761 — Biological Process — very long-chain fatty acid biosynthetic process
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
Family Introduction:
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature:
- A novel leaf-specific myb-related protein with a single binding repeat. DOI: 10.1016/s0378-1119(96)00521-5 ; PMID: 8996094
Sequences:
CDS Sequence:
- >Achn121951|Actinidia_chinensis|MYB_related|Achn121951
ATGGTTAGACCACCTTGTTGTGATAAAATTGGGGTAAAGAAAGGGCCATGGACACCAGAAGAAGATATCATACTGGTATCTTACATACAAGAACATGGTCCTGGCAACTGGAGAGTGGTTCCTACCAATACTGGTTTGCTTAGATGCAGCAAGAGTTGTAGGCTGAGATGGATTAATTATCTGCGGCCTGGTATCAAGCGTGGAAACTTCACTGACCATGAAGAGAAGATGATCATCCACCTCCAAGCCCTTCTCGGCAACAGAAAGCTTCAAGGCTATGGTGGTGGTCAAGGAGATAGCCAAGATGAGTTAATCTCACCCAACTCACACTCATCAAAGTCAAAGGGTCAGTGGGAGAGAAGGCTCCAAACAGACATCCACGAGGCCAAACAAGCCTTGTATGAGGCCTTGTCCCTTGACAAATCAAGCAATAGCAATATCTCTCAATTAAAACCCTCCGATATTGGCTATTACCCAGCTCAATCAACCACCACATATGCCTCTAGCACTGACAATATAGCAAGATTGCTCCAAAATTGGATGAAGAGTTCACCAAAATCACCTCAATCAAGCTCAGAAAATAATATTTCCCAAAACTCCTTCAACAACAACTTAGTTGGTAACAACAACTTAGTTTGTATTGGTTCTAGCCCTAGTAATGAGGGGTGTAACTCACTTTTCTGCTTCAATTCTTCTAACTCTGATGCTTCTCAGTCTGAGACTAGCAAGCCAAATTTGGAGAATCAAGTTGTTCCTCTATCTTTGCTTGAGAAATGGCTGTTTGATGATGGTGGTGCACAAGGGCTAGGTGGCCTAATGGATGTGTCCTTGGGAGAAACTGATGATGGGTTGTTTCAGAGACTAGGGTTTTAA
Protein Sequence:
- >Achn121951|Actinidia_chinensis|MYB_related|Achn121951
MVRPPCCDKIGVKKGPWTPEEDIILVSYIQEHGPGNWRVVPTNTGLLRCSKSCRLRWINYLRPGIKRGNFTDHEEKMIIHLQALLGNRKLQGYGGGQGDSQDELISPNSHSSKSKGQWERRLQTDIHEAKQALYEALSLDKSSNSNISQLKPSDIGYYPAQSTTTYASSTDNIARLLQNWMKSSPKSPQSSSENNISQNSFNNNLVGNNNLVCIGSSPSNEGCNSLFCFNSSNSDASQSETSKPNLENQVVPLSLLEKWLFDDGGAQGLGGLMDVSLGETDDGLFQRLGF*