Gene Details:
- Gene ID: AA1G00037
- Gene Family: MYB_related Family
- Description: MYB_related Family protein
- Species: Aethionema arabicum
- Source: MYB_related family gene from PlantTFDB
Protein Features:
- Gene3D: G3DSA:4.10.60.10
- PROSITE profile: PS51294
- SuperFamily: SSF46689
- TIGRFAMs: TIGR01557
- SMART: SM00717
- Gene3D: G3DSA:1.10.10.60
- Pfam: PF00249
- InterPro: IPR001878 IPR017930 IPR009057 IPR006447 IPR001005
Annotation Proteins:
- Refseq: XP_010556640.1 — PREDICTED: protein LHY-like isoform X1
- Refseq: XP_010556641.1 — PREDICTED: protein LHY-like isoform X1
- Refseq: XP_010556642.1 — PREDICTED: protein LHY-like isoform X1
- Refseq: XP_010556644.1 — PREDICTED: protein LHY-like isoform X1
- Refseq: XP_010556645.1 — PREDICTED: protein LHY-like isoform X1
- Refseq: XP_010556646.1 — PREDICTED: protein LHY-like isoform X1
- Swissprot: Q6R0H1 — LHY_ARATH; Protein LHY
- TrEMBL: E4MW67 — E4MW67_EUTHA; mRNA, clone: RTFL01-03-N03
- TrEMBL: V4L368 — V4L368_EUTSA; Uncharacterized protein
- STRING: XP_010556640.1 — (Tarenaya hassleriana)
Gene Ontology:
- GO:0009409 — Biological Process — response to cold
- GO:0009651 — Biological Process — response to salt stress
- GO:0009723 — Biological Process — response to ethylene
- GO:0009733 — Biological Process — response to auxin
- GO:0009737 — Biological Process — response to abscisic acid
- GO:0009739 — Biological Process — response to gibberellin
- GO:0009751 — Biological Process — response to salicylic acid
- GO:0009753 — Biological Process — response to jasmonic acid
- GO:0042754 — Biological Process — negative regulation of circadian rhythm
- GO:0043433 — Biological Process — negative regulation of sequence-specific DNA binding transcription factor activity
- GO:0046686 — Biological Process — response to cadmium ion
- GO:0048574 — Biological Process — long-day photoperiodism, flowering
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
- GO:0044212 — Molecular Function — transcription regulatory region DNA binding
Family Introduction:
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature:
- A novel leaf-specific myb-related protein with a single binding repeat. DOI: 10.1016/s0378-1119(96)00521-5 ; PMID: 8996094
Sequences:
CDS Sequence:
- >AA1G00037|Aethionema_arabicum|MYB_related|AA1G00037
ATGGACGCAAATACATCTGGAGAAGAGTTACTAGCTAAGGCAAGAAAGCCATATACAATAACAAAGCAACGAGAAAGATGGACAGATGATGAACATGATAGGTTTCTAGAGGCCTTGAGGCTTTATGGAAGAGCCTGGCAGCGAATAGAAGAACATATCGGGACAAAGACTGCTGTACAGATCAGAAGTCATGCACAAAAGTTCTTTACAAAGCTGGAAAAAGAGGCTCAAGCTAAAGGCCTTCCAGTTTGTCAAGCTATGGATATAGAAATTCCACCTCCTCGGCCTAAAAGAAAACCCACTACTCCTTATCCTCGGAAGCCTGGGAATGGTGCATCTTCGTCTCATCTATCATCAGCAAAAGATACAAAACTTGTGTCGTCAGCCTCTTCGTCACGTTGTACTCAGACGTTATTGGATTTGGAAAAACCGCCATTTACTGAGAAGCCCACTGGAGTCCAGAAAACATCAACAGGAAAAGAAAATCAAGATGATAACTGCTCAGGGATTACTACCCGCCCCCATGAAGCTCATTGTTCTTCGATTTCATCGGTGAATAAATATCCCTTGCCAAAGAAAGTGAATCCAGGGAATCCTACCACATTCATGGAATCTGAACAGTCTCTAAGAAAGCAGGCAAGTCCTGATAATGGAACAAATAAAGCTTCAAACTTGGACAACTCGTGTTCCTCGAAGGATAATGCAGTTCAAGATATTCCCAAGACGAACAAAGACAGAGATGGGGACGTTGATAATGGACCACCACATAGCATGCAAAACTTGATGTTTACATGCTCTCAAAATCCTCCAGGTATGATATCTCAAGACTTGATGTTTCATCCCATGGGAGAAGTAAATGGACACTCTGGTTCCTTCACAAATCCAGCTACATCATCTGCTACTCAACATCAAGATAATGTCTTTAGATCTTTTCATCAAGCGCCTCCAGCTTTTCACCCTGCTGCTTTTAACCCTGCGTGCCATACTCAGGATGATTACCGTTCATTTCTCCAGATGTCAACTACATTCTCCAATCTCATTATCTCATCTCTCCTACAGAATCCTGCAGCTCATGCTGCAGCCACTTTTGCTGCTTCCTTTTGGCCTTATGCAAATGTTGGAAGTTCTGGAGATTCATCTACATCTACCAACCAAACTGATGGAACATTTCCACCTAGGCAAATGACATCACCTCCGAGTGTAGCTGCAATAGCTTCTGCTACCGTCGCTGCTGCAACTGCTTGGTGGGCTGCTCATGGACTCCTTCCTGTTTGTGCTCCCCTCGCATGCCATCCCATACCGACTGCTACCGTTCCACCTCCAGGATCTGGTGAAACAACAATGACTGAGTCCGGTAAAAACGAGACAACAACTACAATTGAAAATGCTGAAGAACTGGTCAGAAAACAAAGCAAAGCTCAGGAAGATCAAAACTTGGCTTCAAAATCTCCAGCTTCATCATCTGACGACTCAGATGAAACTGGAATAACAAAGGTAAATACTGACTCAAAGACTGAAAAGGAAGAAGTCGTTGCTGTACATGATTCAAACACAACTCAGAAAAAAAGACCAGTGGACCGCTCCTCATGTGGCTCAAACACACCTTCAGGGAGTGATGCCGAGACAGACGCATTAGAGAAGGTTGAGAAAGATAAAGAAGATGTGATGGAGATGGATACAACAAATCAGCCAGCTCTTGAGTTAAGTAACCGCAGGACTAAAATCAGAGACAACACCAACCCAACTACTGATTCATGGAAAGAAGTTTCTCAAGGGGGTCGTCTTGCGTTTCAAGCTCTCTTTGCAAGAGAAAGACTCCCACAAAGCTTTTCACCTCCACAAAACGCAGCAGATAAAGAGAAGCAGAATCAAAACAACATGTCAATGCCATTGGTTTCAAACAACAATAACCAAGATTCTGCTGATCAAGAAAGGTTAGTAATGATCGGTAATGTACCGGGGAAAAGTCTTAAAAGTAGACAAACAGGGTTTAAACCGTACAAAAGATGTTCAATGGAAGTAAAGGAGAGCCAAGTTGGGAACACAAACAATCAAAGTGATGAAAAAGTCTGCAAAAGGATCCGATTAGAAGGAGAAGCCTCTACA
Protein Sequence:
- >AA1G00037|Aethionema_arabicum|MYB_related|AA1G00037
MDANTSGEELLAKARKPYTITKQRERWTDDEHDRFLEALRLYGRAWQRIEEHIGTKTAVQIRSHAQKFFTKLEKEAQAKGLPVCQAMDIEIPPPRPKRKPTTPYPRKPGNGASSSHLSSAKDTKLVSSASSSRCTQTLLDLEKPPFTEKPTGVQKTSTGKENQDDNCSGITTRPHEAHCSSISSVNKYPLPKKVNPGNPTTFMESEQSLRKQASPDNGTNKASNLDNSCSSKDNAVQDIPKTNKDRDGDVDNGPPHSMQNLMFTCSQNPPGMISQDLMFHPMGEVNGHSGSFTNPATSSATQHQDNVFRSFHQAPPAFHPAAFNPACHTQDDYRSFLQMSTTFSNLIISSLLQNPAAHAAATFAASFWPYANVGSSGDSSTSTNQTDGTFPPRQMTSPPSVAAIASATVAAATAWWAAHGLLPVCAPLACHPIPTATVPPPGSGETTMTESGKNETTTTIENAEELVRKQSKAQEDQNLASKSPASSSDDSDETGITKVNTDSKTEKEEVVAVHDSNTTQKKRPVDRSSCGSNTPSGSDAETDALEKVEKDKEDVMEMDTTNQPALELSNRRTKIRDNTNPTTDSWKEVSQGGRLAFQALFARERLPQSFSPPQNAADKEKQNQNNMSMPLVSNNNNQDSADQERLVMIGNVPGKSLKSRQTGFKPYKRCSMEVKESQVGNTNNQSDEKVCKRIRLEGEAST