Information report for 867233
Gene Details
Functional Annotation
- Refseq: XP_002878180.2 — uncharacterized protein LOC9312517 isoform X2
- TrEMBL: D7LVY6 — D7LVY6_ARALL; Predicted protein
- STRING: Al_scaffold_0005_2712 — (Arabidopsis lyrata)
- GO:0003677 — Molecular Function — DNA binding
- GO:0005515 — Molecular Function — protein binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Arabidopsis thaliana: AT3G57980.1, AT2G42150.1
- Brassica napus: GSBRNA2T00155753001, GSBRNA2T00121923001
- Brassica oleracea: XP_013605118.1, XP_013605117.1
- Brassica rapa: XP_009116495.1, XP_009116494.1, XP_009142041.1
- Raphanus raphanistrum: RrC773_p1
Sequences
CDS Sequence:
- >867233|Arabidopsis_lyrata|MYB_related|867233
ATGGAGGAGCTCCTCCTCGCCTGCGCCGTTCACCGTCACGGTACTGATTCATGGGACTCCGTCGCTTCTGAAATCCATAAGCAGAACCCCACTGTTCGTACACTCACCGCCATCGACTGTCGTCACAAGTACAACGATCTCAAGCGCCGATTCTCCCGTAACCTGGTCTCGCCGGGATCTGCAGAAGGAGAAGAAGATACTCTCGCCGCCGAGATCTCGTCCGTTCCTTGGCTTGAGGAGCTGAGAAAGCTCCGTGTCGATGAACTCCGACGAGAAGTCGAACGTTACGATCTATCCATCTCGTCCTTGCAGTTGAAGGTAAAGAGATTGGAAGATGAGAGAGAGAAGAGCTTGAAAACCGAGAATTCAGATCTAGATAAAATCGCGGAGACGAAAGAGAACCACAGTGAATCGGGAAACAACTCCGGCGTACCGGTCGCCGAGCCGACAAATTCTCCAGATCCGAATGATAATAGTCCCGGAACCGGATCTGAGAAGACGAATAAAGATGTTAAAATCGCTGAACCAGTGGACGAAGAACCGAACCGGATCGACGAGAAGCCGGTCAGAGAGGATTCGGGTAGAGGAAGTTGCGAGAGCGTGGCCAAGGAATCGGATAGAGCAGAACCAGAAAGAGAGGGAAATGACTCGCCCGAGTTCGTTGAGTCAATGGACGAGTCGAAAGGAGAGGAAGATAGGAAAGAAACGAGTGATGGGCAGAGCTCGGCGAGCTTACCGAGAAAGGAGACGGTAGACCAGCACCAACCGGGTAACGAGGATCAATCTCTGACCGTCAATAAGATCCCCGCTGAATCTCAGCCGTTGATTGATTTCATCGAGATTCTTCAGTCTCACCCCATTGGCTCTCACTTTTCGCGCCGGCTCCAAAGCCAGGAAACATCCGAGTACGACAGGATAATAAGGCAGCACATAGACTTTGAGATGATTCGAAGTCGTGTGGAAGAAGGTTACTACAAAACCTCCAGGAGCAAGTTCTTTCGGGATTTACTGCTACTAGTCAACAATGTGAGAGTTTTCTATGGCGAGCCATCTTCTGAGTTTAATGTCACAAAGCAGCTTTACCAGCTTATCAAGAAACAGATGAGTCTCAAAATTCCTAAACAAACCTTACCAACACCAAAAGAGGAATCCTTGGTGACGTCTAAGGAGGAAGTCACAGTCTCTTCTCTAAAACCAACACTTTCAGTGCCTATTATAGCTTGTCGGAAACGTAGTTCCTTGGCTGTTAGATCTTCAGCGTCTGTCACTGAAACTTTGAAGAAAAAGACTAAAGTAGTTCCAACAGTCGATGAGAAGCCAGTTTCAGAAGAGGAGGAAGATGGAACCTCTGATAAAGATGAGAAACCTATTGTTTCTAAGAAGATGACTAGAGGAGGAGCACCCTCAACAGCTAAAAATGTAGGGAGCACAAACGTTAAGACCAGTTTGAATGCTGGTATCTCTAGTAAAGGCCGGTCTTCAAACGATAGCTCTGTGCCAAAGAAAAGTGTTCAAGAAAAGAAGGGTAACAACGCTAGTGGTGGCTCAAAAAAGCAAAGTGCTGCTAGTTTTCTTAAGAGAATGAAAGGGGTTTCATCATCTGAAACCGTAGTAGATACAGTGAAGGCTGATTCCTCTAATGGAAAGAGAGGAGCTGAACAGAGGAAAAGTAATAGTAAGAATGACAAAGTGGATGCAGTAAAACCGCCTGCTGGTCAGAAACGATTAACTGGGAAAAAGCCAACAATTGAAAAGGGTAGTCCTGCAAAGAAAAACACTGGTGCCGCCTCTAAAAGAGGCACTGCTCCTCTAATGACAAAGCGGGACAGTGAAACTAGTGAAAAGGAAACAGGTTCTTCTACTCGTCCGAAGAAACGTTCAAAGAGGTGA ATGAGGATGGAGAAATTTTGCGTTTCAGACAAGGAAGCAAAAAGAAATATATATAATAAGATAGGTGATGATCTTGAGATAAGTGCGAAGGTGCATAGCAATAGTATTAGTAGTAGTACAGAATCACTGCCAGCTTGTAATTCAACGATGAGGATGCTTCATCATGATAATCACTACCGTCCACCTTCATCATCATCGTCATTAAGAGGTCTTGGTGGTGGTGATCTTGGCCCCACATGTAACAGGGCTCCTGCTGGTCCTGATGATATATACGATGTTGTTGTTGTTTCAAATGCTGGTTCTCATGCTGCTGCTGTTGCTTCTGCTGCTGTTAGTGGTGATGCAGTTGTAAGACCTCTGCAGCCTTTTGACATTTCCACAACTTCTCCTTCTACTTCTTCTCCCACTACCGCCTTCAAGTTTTCAGGAGGTATGGCGGCGACTTTGGGTTTTCCTTTTACAAATGCACAGTGGAAAGAGCTTGAAAGACAAGCTATGATATACAAATACATGGTGGCATCTGTACCTGTTCCTCCTGATCTTCTCCTACCAATCAATACTAGAAACCTCTCTGCCCCTGCTGCTTCCCAATATTCCTTGGGAAGTGATTTCAGTTTGAGGTTATCAAATAACAATACAGATCCAGAACCAGGAAGGTGCAAGAGGACAGATGGTAAAAAATGGAGGTGCTCCAGAGATGTGGCGCCTGATCAGAAATACTGTGAGCGTCACATGCACAGAGGCCGTCCCCGTTCAAGAAAGCATGTGGAAGTTCATGTCAACAACAACAACAACAACAACAACAACAACAAGAGGACTCGCCATGATCATCATCATCATCATGCTCTTCCTACTACATCTTCTGCAACCATGGCTGTTACCAACCCTACAGTCAACAACAACATCAATGGTTCTCACACTCAATTTATTGGACCTACCTCTGCTCTGCCATACCACCAGTCCCCCGTTTTTCTTGACAAATCCACTATCAAAGCCTCTACTTTTGATTCTTCTCTTTCTTCAGAAAAGGTGTCAACCAGGAACTTGGACTGGATGATGAAAGCAGAACCTGCAGCCATGACAGCATCCGATCCACAGTGGCACCAATTGATGCAAACAAAAATGGAATTGTCCTCCAAAACCACCTCCTATTGCGACACTTCTAATTCCTCTGTTTTCAACCAACACTCTGAAGAAGTTCCATTTCTGAATCTGAATTCCTATTCCAATTTCAATACCGGTCAAGATCAACACGAAAGCGACCAATGCTCTCTGTTTCTGAACCCAGAAGTGGTTTCTTTGGAAAATCAAACTCCTGCTGTTCATGCTGTGCCTGTGGCCCCAAGGAGTTTCATTGACGCTTGGTCTAACTCAACCATTGCCGACAAAAGCTGTGTTTCATCAAGTGCGAAGCTGTCACCTTCTTCACTCACTCTATCAATGGGAGGCTGTAACTCCATAAATGAAGAAATGAGTCGGACCCACCAGATAGGCTCAGGCTACAATGTAAACCATAGTAAAACTCATGTCACAAGCTGGCTAACCCCTGCTTCTTGGGTTGCTCCACAACCAGGTGGGCCATTGGCTGAAGTACTAAGACCAAGCTCGCTAACGGGCAGTACTACAAGCGCAGTCTCCAATCCTTCATCTCCAGTCAATAACGGCAAAGGAGGAGATTCTTCTTGTAGTCCAGTGGCGACTACAGTGTCATCACCATCTGGGGTTCTTCAGAAAACTCTTGCTTCACTGTCTGATAGTAGTGGAAGTAGCAGCCCAACTGTTGTTGGATGTTCTTCTTCAAATGCCAAAGTAGAGATTGCTTTGCTTTAG
Protein Sequence:
- >867233|Arabidopsis_lyrata|MYB_related|867233
MEELLLACAVHRHGTDSWDSVASEIHKQNPTVRTLTAIDCRHKYNDLKRRFSRNLVSPGSAEGEEDTLAAEISSVPWLEELRKLRVDELRREVERYDLSISSLQLKVKRLEDEREKSLKTENSDLDKIAETKENHSESGNNSGVPVAEPTNSPDPNDNSPGTGSEKTNKDVKIAEPVDEEPNRIDEKPVREDSGRGSCESVAKESDRAEPEREGNDSPEFVESMDESKGEEDRKETSDGQSSASLPRKETVDQHQPGNEDQSLTVNKIPAESQPLIDFIEILQSHPIGSHFSRRLQSQETSEYDRIIRQHIDFEMIRSRVEEGYYKTSRSKFFRDLLLLVNNVRVFYGEPSSEFNVTKQLYQLIKKQMSLKIPKQTLPTPKEESLVTSKEEVTVSSLKPTLSVPIIACRKRSSLAVRSSASVTETLKKKTKVVPTVDEKPVSEEEEDGTSDKDEKPIVSKKMTRGGAPSTAKNVGSTNVKTSLNAGISSKGRSSNDSSVPKKSVQEKKGNNASGGSKKQSAASFLKRMKGVSSSETVVDTVKADSSNGKRGAEQRKSNSKNDKVDAVKPPAGQKRLTGKKPTIEKGSPAKKNTGAASKRGTAPLMTKRDSETSEKETGSSTRPKKRSKR*