Information report for 462936151
Gene Details
Functional Annotation
- Refseq: XP_025820794.1 — protein LHY isoform X1
- Refseq: XP_025820795.1 — protein LHY isoform X1
- TrEMBL: A0A2T8IF63 — A0A2T8IF63_9POAL; Uncharacterized protein
- STRING: Pavir.Fa01905.1.p — (Panicum virgatum)
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Panicum virgatum: Pavir.6KG070500.1.p
- Saccharum spontaneum: Sspon.06G0010960-1A
- Setaria italica: Seita.6G055700.1.p
- Setaria viridis: Sevir.6G053100.1.p, SEVIR_6G053100v2
- Zea mays: GRMZM2G014902_P01, GRMZM2G014902
Sequences
CDS Sequence:
- >462936151|Eragrostis_tef|MYB_related|462936151
ATGGAGCAGGACCTGCGGTGGCGACCTTCATGTGATTCATGGGTGGGCACAGGATTTATTCATGAGTCGGGCAATGTAAAGACTCAGAACTATCAAAATTACTTTGCCTACGGGAGCTATAGGATAATCAAAGGGCTGAACTGGAGCCAGACTCGGGCAACGGCCTATGTTGCCCGAGCATCAATTGCAGCTGGATCAATTCAAGAGATGGAGGTAAATTCTTCTGGTGAGGAAGCAATGATAAAGGTAAGAAAGCCATACACAATAACAAAGCAGCGGGAGAGGTGGACTGAGGCAGAACACAAACGGTTCCTTGAAGCCTTGAAGCTTTATGGCAGACAATGGCAGCGTATAGAAGGTAGTGATGCTACGCTGTGCTCCTGCCTGGTCAGTGATGAGGGCATCATGGTTCGTGTTGTGACCAGGGGCGGAGCCATTGTTTTAAACAGGGGCCTTTTGGAGAAAGAAGCTATGAACAATGGTACTTCCCCGGGGCAAGCTCTTGACATTGACATACCTCCACCACGACCTAAAAGAAAGCCTAACAGTCCATATCCTCGAAAAAGTGGTCTCAGCTCTGAGATATCAAACAAGGAAGTACCAAATGATAAGTCAACAAAATCAAATATGAGACCGAGCAACGGCAATGTAGAAATGGCAAGCGATTCATCTCTTCAGAAACTTCAAAGAAAGGAAGTGTCTGAAAAAGGAAGTTGCTCAGAAGTTCTTACTCTATTTCGAGATGTCCCATCTGCGTCCTTTTCTTCAGTTAACAAGAGCTCTTCAAATCATGGTGCACCGGGTACCGAACCAACTAAAAATGAAATAAAGGGAATGACCACCATGGAAAAAAAATCTCTGTCTATCAATGTGCACGATGATGCAAAACAGATCAATGATAGGGAAATGGAAAGGCTTAATGGAATCCACATCAGCTCTAAATGTGACCGCTCTGATGAGGATTATTTGGATAGCTCGACACAACAAATGAAGCTGAAGCCGATGTCCATGGAGGCTGTGGACAGACAAACCTCAAGAGCTTCTCATTGTGTAACTGAGAGAAATGTGACAGCTAGCGTCCCTGTCATGGGAACTGAAGGATCTCATCCTGACCAAATATGTGATCAAGAGGGAGCCAACGGAAGCATGAACCCATGCATCCATCCAACAATTTCTGTAGATCCGAAATTTAACATCAATGCCACACCACTGCCATGTCCTCACAATTTTGCTGCCTTTCCACCACTGATGCAATGCAACTGCAATCAAGATGCCTACAGATCTTTCGTCAACATGTCATCCACCTTCTCCAGTATGCTTGTTTCGACCTTGTTGTCAAACCCTGCCATCCATGCAGCCGCTAGGCTTGCTGCATCCTACTGGCCTGCAGCAGAAAGTAACACTTCTATTGATCCAAATCAAGACAATCCTGCAGAGGGTGTTCAAGGAAGTGACATTGGTTCTCCTCCAAGCATGGCTTCTATGGTAGCAGCTACAGTTGCTGCAGCATCTGCATGGTGGGCAACACAAGGTCTTCTCCCTTTTTTTCCTCCACCCATGGCTTTTCCATTTGTCACGGCTCCTAGTGCTGCCTTTCCCACGACAGATGTTCAACGAGCTTCAGAAAAAGTCAGAGACTGTCAGCTTGAAAATGCGCAGAAGGAATGCCAAGAAGCTCAAAATCAAGGTCAGTCTGAAGCTTTAAGGCCTGCACCGCCTTCGGGGTCTGATGTTAATGGGAAAGGAGACTTGTCTCTCCACACAGAGTTAAAAATATCTCCTGGCCAGAATGCTGACGCCACACCTACCACTGTTGGTGACACAAGCGATGTGTTCAGAAACAAGAAAAAGCAGGATCGCTCTTCATGTGGTTCCAACACACCTTCAAGTAGTGATGTAGAGGCAGATAATGTTCCTGAGAAGCAAGAAAAGGCTGACGACAATGCAAAGCAAGCCTCCTGCAGTAACTCTTCAGCTGGTGACACAAATCACCGCAGATTTAGAAGTAGTGGAAGCACAAGTGATTCGTGGAAGGAAGTTTCTGAAGAGGGTCGTCTGGCTTTTGATGCACTGTTCAGTAGAGAAAAGCTTCCCCAGAGCTTTTCTCCCCCTCAAGCAGAAGAATCAAAGATGATTTCCAAGGAGGATGAAGATGAAGCAACCACGGTGACAGTTGACCTCAACAAGAATGTTACAGCTATCGATCATGATCTTGATAAGATGGATGAGTCAAGAGCTTCCTTTCCCAGTGAACTTTCACAACTGAAGCTGAAATCCCGCCGTACAGGCTTTAAACCATACAAGAGGTGCTCGGTGGAAGCAAAGGATAATAGGGTGCAGGCTAATGAAGATAATGCTGACGCCACACCTACCACTGTTGGTGACACAAGCGATGTGTTCAGAAACAAGAAAAAGCAGGATCGCTCTTCATGTGGTTCCAACACACCTTCAAGTAGTGATGTGGAGGCAGATAATGTTCCTGAGAAGCAGCAAGAAAAGGCTGACGACAATGCAAAGCAAGCCTCCTGCAGTAACTCTTCAGCTGGTGACACAAATCACCGCAGATTTAGAAGTAGTGGAAGCACAAGTGATTCGTGGAAGGAAGTTTCTGAAGAGGGTCGTCTGGCTTTTGATGCACTGTTCAGTAGAGAAAAGCTCCCCCAGAGCTTTTCTCCCCCTCAAGCAGAAGAATCAAAGATGATTTCCAAGGAGGATGAAGATGAAGCAACCACGGTGACAGTTGACCTCAACAAGAATGTTACAGCTATCGACCATGATCTTGATACGATGGATGAGTCAAGAGCTTCCTTTCCCAGTGAACTGTCACAACTGAAGCTGAAATCCCGCCGTACAGGCTTTAAACCATACAAGAGGTGCTCGGTGGAAGCAAAGGATAATAGGGTGCAGGCTAATGAAGATGTTGGTACCAAGAGGATTCGTCTTGAGAGCGAAGCATCTACCTGA
Protein Sequence:
- >462936151|Eragrostis_tef|MYB_related|462936151
MEQDLRWRPSCDSWVGTGFIHESGNVKTQNYQNYFAYGSYRIIKGLNWSQTRATAYVARASIAAGSIQEMEVNSSGEEAMIKVRKPYTITKQRERWTEAEHKRFLEALKLYGRQWQRIEGSDATLCSCLVSDEGIMVRVVTRGGAIVLNRGLLEKEAMNNGTSPGQALDIDIPPPRPKRKPNSPYPRKSGLSSEISNKEVPNDKSTKSNMRPSNGNVEMASDSSLQKLQRKEVSEKGSCSEVLTLFRDVPSASFSSVNKSSSNHGAPGTEPTKNEIKGMTTMEKKSLSINVHDDAKQINDREMERLNGIHISSKCDRSDEDYLDSSTQQMKLKPMSMEAVDRQTSRASHCVTERNVTASVPVMGTEGSHPDQICDQEGANGSMNPCIHPTISVDPKFNINATPLPCPHNFAAFPPLMQCNCNQDAYRSFVNMSSTFSSMLVSTLLSNPAIHAAARLAASYWPAAESNTSIDPNQDNPAEGVQGSDIGSPPSMASMVAATVAAASAWWATQGLLPFFPPPMAFPFVTAPSAAFPTTDVQRASEKVRDCQLENAQKECQEAQNQGQSEALRPAPPSGSDVNGKGDLSLHTELKISPGQNADATPTTVGDTSDVFRNKKKQDRSSCGSNTPSSSDVEADNVPEKQEKADDNAKQASCSNSSAGDTNHRRFRSSGSTSDSWKEVSEEGRLAFDALFSREKLPQSFSPPQAEESKMISKEDEDEATTVTVDLNKNVTAIDHDLDKMDESRASFPSELSQLKLKSRRTGFKPYKRCSVEAKDNRVQANEDNADATPTTVGDTSDVFRNKKKQDRSSCGSNTPSSSDVEADNVPEKQQEKADDNAKQASCSNSSAGDTNHRRFRSSGSTSDSWKEVSEEGRLAFDALFSREKLPQSFSPPQAEESKMISKEDEDEATTVTVDLNKNVTAIDHDLDTMDESRASFPSELSQLKLKSRRTGFKPYKRCSVEAKDNRVQANEDVGTKRIRLESEAST