Information report for 30131.m007077
Gene Details
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Functional Annotation
- Refseq: XP_002512944.1 — uncharacterized protein LOC8285747 isoform X1
- TrEMBL: B9RH85 — B9RH85_RICCO; Uncharacterized protein
- STRING: XP_002512944.1 — (Ricinus communis)
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Citrus sinensis: orange1.1g005589m
- Manihot esculenta: Manes.11G084700.6.p, Manes.11G084700.5.p, Manes.11G084700.8.p, Manes.11G084700.7.p, Manes.11G084700.2.p, Manes.11G084700.1.p, Manes.11G084700.4.p, Manes.11G084700.3.p
- Populus trichocarpa: Potri.010G019600.1, Potri.010G020900.1, Potri.010G019600.5, Potri.010G019600.3
- Vitis vinifera: GSVIVT01023816001
- Ziziphus jujuba: XP_015892528.1, XP_015892526.1
Sequences
CDS Sequence:
- >30131.m007077|Ricinus_communis|MYB_related|30131.m007077
ATGGATTCTGATTGGGATCCTTTTGATGATGTACTTCCGGAACCAGCTTTGGCCCATGCTCGGGCTGGTGGGAAGTTTCAACCGAGGGCCAAACCACGACCAAAGAAGGTAGCATCTGCATCTATTTCTTCTATTCTTCCAACCAATGCCAAGGAAAAGTATGTGCCATCCTTACCAACTGCTTTGGACCGAAAACAGTCTGCTCAGTCCGTTGATAATGTGGATGATATATTGACAATTCCAGCTAGTAGTTCTCCAGCTTCATCAACATTACCTGGAAGGGAAGAACATCTGGAGAAAACTGATGAAAACCTGAAATGTGAACCGCTAAAAGATTTAACAGAACTTGTCAGAAGATCAAAGGATCTGCCTTCCGCAGATGCCCTCCCTTTAAAGGTTGTAGTGTCTGATAGAAAAACTGGAGATTCTTGTCTGTCAATAAAAAAGACAGATTCTTCACAGCTTGACCTGGACGCATTTGCTGGCAGTATTTGTGATGCTGCAGAAAATAAAGCCTTGGTTGACTCTCATACAACAACATCTGTACAGTCCGTTGATGTCCTTGATAAGACTATGGGCCCAGTTGGCCCATCCTTTCCTGAACAGATAATTGAGAGTAACGAGCCATTGGGAGACAGTGAAGTTCTATTTTCTGATGACAGCAACTTGAAATTAATTAACCTTTCACCCAATGAACTTGAATCCAAAGAGGATATGATCTCCAAAGATGACCATGCAGAGGTGAATGAGATGGAGCTTGATTTGGACCCATTTGCTGATATTCTTCCCCCACCTTCCATTAGCAGTGTGAGAAATGGTGGCAAATTTCAACCTCGAGCAAAGGCCCGACCTAGAAAGGGAACTTCTGAAACAGTTGCTATTGCTGCTTCTACTAGTACAATGGAAGAGCAAGCTAGTCTAGTCTCCCATGTGTCGGATAACCTGCAGCCTGCTAAATTTGTTGATGCTGGAGATGGCAGACTGAGAGATCCTGTTCCGTCATCCTTATATTCCTTGGAGATCTTGGTAAGCAAAGAGTCATTGAGAAATGATGACTACAAGAATTTTGGAGTTCTATTGTCCAGTGATGTCATGAGTTCCGGATTAGTGAATTCTTCACAATTACTTTCTACCGATGCGGTGCATTTAGGTGGTGCTACGAGAGACCTGCATTTTGGATTGGCAAAATCAATGGGAGAGAATACAGACATATTTTCAGGGTTGGAATATATCCATGATCTTGTTACCCAATCTCCAAGTAGCACAGAAATTCCAGTTCATTCTTCAAATGAGGAGACGGAAGGATCTAGATTTCCAGCTCAAAATTCTGTTAATTCTTCAGCACTCGGGGCATGTAGTGTGGATCTCCCAGATCCAGTAAGCTGTAATGAAGCAGCCATTTGGACTGATAACAGAAGACCAGAGGTGGAGGAAGCAGGGGTTTTTTCTAATTTGGGAAGGCCTGATAATTTATCTGAGTCCATTTCTGAATATAATACTAGAAATTTCCAGCCAAGACAAAAGGTGCAAACTGGAAAGGAGAAATCTACTGTAAGCACTCTTCCACAAGATGCAGTTGATTCTGTCGCATCTTCTTCGAATGCTGAGTTTGAACCTTCTGAAACTATGTACATGGATGTGGGCTCAATTCCTACCTTCCCGTCTGATGATGTTCTTGACTATTCATCCATGAGCTTTAGCAATTGTATTTCACCAGATGCTACTACTTCTGGGTTTCTATTGAATGAGGAACAGATAAACCTTGCTGAAGCTTCTCGCTCCAGTGACCCAAATGTTTTGTGCCAAGAAGATCTACCTGTAGAGGCTGTGAAGGAGAATTCTAAGAGTAGAAGAAGGAAATCATCTTCATTATTGATTTCTTCTCAGAAGTTTGGTGAAGCCTCATTAGCTGGTGAGATGGGGGGAAGTGGTAAATCATCAAGGCAGCTGAGAAAAAGGACTGCTGCTCCACAACTTGTTGATGAGCCAGAGGATGAAGCTTGTGACAATGACGGCTTTCCTTCTAAAGCTTCTAGTAATTCTATTGCGGATGAAGAAGATGGTGATTATGATTATAGAGTGGATGAAGATAATGATAATGAAGATGCATTGGAAAATAAATCTCGCAAGAAAAGAGCTTCAGAAAAGCTGAAGAAACCTGCAGCTGATGAGGGAAAAACAGTTAGACGACGGAAGAGAGACACTGATGCATCAGAGCAATTAACTCAACAACCACGCAAGAAGTTTTCTCATTCCACCCGCAGGAAAAACAGATTGAAGGATTTGCTTAGCATGCCAGAGGATGAAATTGATTTTCAGAGGCTTCCTGTCAGAGATATTATTTTGCTTGCAGGGTACAGGGAGAGCTTAGCTAGTAAAGAGGCAAAAGAATCAAAGAATGCTTCAACCAACCAAAGTACTGCAAACTCTTTCCACGGGGAAGATTCTCATAATGAAGAGGACACTGTTACTTCAGAGCAATCTGGAGGACACATTAATGATCAATCAAATATCTTATTCAATTACCACTCCTTCATGGACAAAACACCGACTGCAAGATGGTCGAAACAAGAGACAGAATTATTCTATGAGGGAATTCAGCAGTTTGGGACCGACCTATCAATGATACAGCAGCTTTTTCCTGGACGAACACGTCATCAAATCAAGTTGAAATATAAGAAGGAAGAACGTCAACATCCATTAAGGCTTTCTGATGCTCTGCGCAATCGTGCTAAAGATCATTCTCATTTTGAAAAAGTGATTGAGCAGCTGCAACAAGTTGCTACTCAGGCAGAACAAGAGTGTAACAGGGATGCTTCAGTAGATGTTACAGACGAGGAGGCAGAGTTGAATCCTGAAACTAATCAGGAAACAACAAAATCTGAGCGGTATGAGGATGTAACCGTGGAAGATCGGGAAGGAGATGTAAATGAAGAAGTTCATAGTCCTTCAAAATATGATGAAGATGATGATGACCTGGATATATGGAGTTCATATAAAAGTGTATTTTAG
Protein Sequence:
- >30131.m007077|Ricinus_communis|MYB_related|30131.m007077
MDSDWDPFDDVLPEPALAHARAGGKFQPRAKPRPKKVASASISSILPTNAKEKYVPSLPTALDRKQSAQSVDNVDDILTIPASSSPASSTLPGREEHLEKTDENLKCEPLKDLTELVRRSKDLPSADALPLKVVVSDRKTGDSCLSIKKTDSSQLDLDAFAGSICDAAENKALVDSHTTTSVQSVDVLDKTMGPVGPSFPEQIIESNEPLGDSEVLFSDDSNLKLINLSPNELESKEDMISKDDHAEVNEMELDLDPFADILPPPSISSVRNGGKFQPRAKARPRKGTSETVAIAASTSTMEEQASLVSHVSDNLQPAKFVDAGDGRLRDPVPSSLYSLEILVSKESLRNDDYKNFGVLLSSDVMSSGLVNSSQLLSTDAVHLGGATRDLHFGLAKSMGENTDIFSGLEYIHDLVTQSPSSTEIPVHSSNEETEGSRFPAQNSVNSSALGACSVDLPDPVSCNEAAIWTDNRRPEVEEAGVFSNLGRPDNLSESISEYNTRNFQPRQKVQTGKEKSTVSTLPQDAVDSVASSSNAEFEPSETMYMDVGSIPTFPSDDVLDYSSMSFSNCISPDATTSGFLLNEEQINLAEASRSSDPNVLCQEDLPVEAVKENSKSRRRKSSSLLISSQKFGEASLAGEMGGSGKSSRQLRKRTAAPQLVDEPEDEACDNDGFPSKASSNSIADEEDGDYDYRVDEDNDNEDALENKSRKKRASEKLKKPAADEGKTVRRRKRDTDASEQLTQQPRKKFSHSTRRKNRLKDLLSMPEDEIDFQRLPVRDIILLAGYRESLASKEAKESKNASTNQSTANSFHGEDSHNEEDTVTSEQSGGHINDQSNILFNYHSFMDKTPTARWSKQETELFYEGIQQFGTDLSMIQQLFPGRTRHQIKLKYKKEERQHPLRLSDALRNRAKDHSHFEKVIEQLQQVATQAEQECNRDASVDVTDEEAELNPETNQETTKSERYEDVTVEDREGDVNEEVHSPSKYDEDDDDLDIWSSYKSVF