Information report for 30076.m004464
Gene Details
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Functional Annotation
- Refseq: XP_002515093.1 — protein LHY isoform X1
- Refseq: XP_015572367.1 — protein LHY isoform X1
- TrEMBL: B9RMV4 — B9RMV4_RICCO; Uncharacterized protein
- STRING: XP_002515093.1 — (Ricinus communis)
- GO:0009409 — Biological Process — response to cold
- GO:0009651 — Biological Process — response to salt stress
- GO:0009723 — Biological Process — response to ethylene
- GO:0009733 — Biological Process — response to auxin
- GO:0009737 — Biological Process — response to abscisic acid
- GO:0009739 — Biological Process — response to gibberellin
- GO:0009751 — Biological Process — response to salicylic acid
- GO:0009753 — Biological Process — response to jasmonic acid
- GO:0010243 — Biological Process — response to organonitrogen compound
- GO:0042754 — Biological Process — negative regulation of circadian rhythm
- GO:0043496 — Biological Process — regulation of protein homodimerization activity
- GO:0045892 — Biological Process — negative regulation of transcription, DNA-templated
- GO:0045893 — Biological Process — positive regulation of transcription, DNA-templated
- GO:0046686 — Biological Process — response to cadmium ion
- GO:0048574 — Biological Process — long-day photoperiodism, flowering
- GO:0005634 — Cellular Component — nucleus
- GO:0043565 — Molecular Function — sequence-specific DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Citrus sinensis: orange1.1g004262m, orange1.1g004260m, orange1.1g004258m, orange1.1g004257m
- Manihot esculenta: Manes.05G015600.1.p, MANES_05G015600, Manes.01G239000.2.p, Manes.01G239000.1.p, MANES_01G239000
- Populus trichocarpa: Potri.014G106800.9, Potri.014G106800.8, Potri.014G106800.7, Potri.014G106800.5, Potri.014G106800.3, Potri.014G106800.10, POPTR_014G106800v3, Potri.002G180800.5, Potri.002G180800.4, Potri.002G180800.3, Potri.002G180800.1, POPTR_002G180800v3, Potri.014G106800.6
- Ziziphus jujuba: XP_015888949.1
Sequences
CDS Sequence:
- >30076.m004464|Ricinus_communis|MYB_related|30076.m004464
ATGGACACTTACTCCTCTGGTGGTGAAGACTTAGTTATTAAGACAAGAAAACCTTATACAATTACCAAGCAACGTGAACGATGGACAGAGGAGGAGCATAATAGGTTCCTAGAGGCCTTGAAGCTCTATGGACGAGCTTGGCAACGAATTGAAGAGCATATAGGAACAAAGACTGCTGTGCAGATAAGGAGTCATGCACAGAAATTCTTTTCAAAATTGGAGAAGGAGGCTATTGCGAAAGGTGTTCCAATAGGACAAGCTCTTGATATAGACATTCCACCTCCACGTCCTAAGAGAAAACCAAGCAATCCTTATCCTCGAAAGACAGGTGCTGGTCCTACTCCATCTCAGGTGGCAGCAAAGGATGGAAAGCTTCCAAGTTTAGTTTCTTTTCCACGTTGTACACAAGTGCTGGATTTGGAGAAAGAACCACTTCCTGAGAGACTGAATGGACATGAGAAGCAAACAGATGCAACAGAAAACCAGGGTGACAATTGCTCTGAAGTCTTTACCCTTCTCCAAGAAGCTCATTGTTCCTCTGTTTCTTCAGCAAATAAGAATTCTGTAGTAACGGCAGAGGCACTAAAAAACTCATGCTCATTCAGGGAGTTTGTACCTTCGCTGAAGAAGGTGGTAAATCAGGATGCCACTAATGAATCATATGTCACCATCGAACTTGAAGGAAATCAAAAGCTAGATAAGCCTGATGCCAAACAGACAGTTCAGGATAATGGTAGTAGTAAAGCTTCAAAGTCGGAATCCTGCCTGTTTCATGAGAAATTTGATCAGGCTAAGAAATCAGATGAGTTTAACAGTGCATTGCCAACTGATGAAATGGAAACCATGCAGGGTTATCCAAGGCATGTCCCCGTGCATGTTTTGGAAGGGAGCTTGGGAACATGTATGCAAACTCCTACCTCAGATGTGTCTTTCCAGGAGCCTATATTTTGCCCTACGGGAGAAGTTCATGGGCATCCCAATCTGTACTCTCATCCAGCTGCATCTGCTACTACTGAACATCAAAATACTGCACCTAGATCTTCTACACATCAATCATTTCCAAGTTTTCCTCCCTTTAATTCAACTCAACATAATCAAGATGACTATAGATCATTTCTCCACATCTCCTCCACATTTTCGAGTCTCATTGTATCTACACTGCTCCAAAATCCTGCAGCCCATTCTGCAGCAAGCTTTGCAGCTACATTTTGGCCGTATGCTAATCTGGAAAGTTCTGCAGATTCTCCAATATGTCCCCAAGGAGGATTTCCATCAAGGCAAATGAACTCTGCCCCCAGTATGGCGGCTATTGCTGCTGCTACTGTGGCTGCAGCAACTGCATGGTGGGCAGCACACGGACTACTTCCCTTGTGTGCTCCTCTTCATGCTGCCTTTACCTGCCCTCCTGCTTCTGGAACTGCTGTTGCATCAACAGGCGCGGGTCAAGTTCCTGCAGCCAAGACAGAAAGAAAACTAACTGTTGAAAATCCTCTATTACAAAATCAACAATTTGATGTAGAACATTCCAAAGTTTTGCAAGCTCAGAATTCAGCCTCCAAATCACTGGAGATGTCATTGTCTGACTCTGAAGAGAGTGGAGGTCCGAAGAAAAATACAGGATCAAAAGCTACTGATCATGAGATGGCTACACCAGCACCTGAGGTCCAGGACCCGAGCAAAGCAAAAGCCAGAAAACCGGCTGACCGTTCTTCATGTGGTTCAAATACATCTTCTAGCAGTGAAGTGGAGACAGATGCACTAGAGAAGCTTGAGAAAGGCAATGAAGAGTTAAAAGAAACTGATACAAACCCTGAACCTACTGAGTCTAGTTGTCGACGCAGTAGAAGTAACAGCAGCATAAGTGATTCATGGAAGGAGGTCTCTGAAGAGGGGCGGCTGGCTTTTCAAGCTCTCTTCTCCAGAGAGGTATTGCCGCAAAGCTTCTCTCCTCCACATGTTTTAAAGAATGAGGCACGCCAGAAGGATGAAATCGAAGAAGATAAGCAGAACACAGTTGAGAAAAATGAAAATGCATTATTATTGAGCCTTAACGGCAACATATCGGGATTCTGTACTAGCCATCAAGAAGCAGAGAAAATTGAGATGCCTAGATGTGAAAACAACGGGGAGGACGGGCTGCTGACATTTGGACTCGGACATGGAAAACTGAAGGCTCGTCGAACAGGATTCAAACCATACAAAAGATGTTCAGTGGAGGCTAAGGAAAATAGGATGCTGACCGCCGGCAGCCAAGGTGAGGAGAAAGGCCCAAAGAGGATACGTGTGGAAGGGAAAGCTTCAACTTGA
Protein Sequence:
- >30076.m004464|Ricinus_communis|MYB_related|30076.m004464
MDTYSSGGEDLVIKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEAIAKGVPIGQALDIDIPPPRPKRKPSNPYPRKTGAGPTPSQVAAKDGKLPSLVSFPRCTQVLDLEKEPLPERLNGHEKQTDATENQGDNCSEVFTLLQEAHCSSVSSANKNSVVTAEALKNSCSFREFVPSLKKVVNQDATNESYVTIELEGNQKLDKPDAKQTVQDNGSSKASKSESCLFHEKFDQAKKSDEFNSALPTDEMETMQGYPRHVPVHVLEGSLGTCMQTPTSDVSFQEPIFCPTGEVHGHPNLYSHPAASATTEHQNTAPRSSTHQSFPSFPPFNSTQHNQDDYRSFLHISSTFSSLIVSTLLQNPAAHSAASFAATFWPYANLESSADSPICPQGGFPSRQMNSAPSMAAIAAATVAAATAWWAAHGLLPLCAPLHAAFTCPPASGTAVASTGAGQVPAAKTERKLTVENPLLQNQQFDVEHSKVLQAQNSASKSLEMSLSDSEESGGPKKNTGSKATDHEMATPAPEVQDPSKAKARKPADRSSCGSNTSSSSEVETDALEKLEKGNEELKETDTNPEPTESSCRRSRSNSSISDSWKEVSEEGRLAFQALFSREVLPQSFSPPHVLKNEARQKDEIEEDKQNTVEKNENALLLSLNGNISGFCTSHQEAEKIEMPRCENNGEDGLLTFGLGHGKLKARRTGFKPYKRCSVEAKENRMLTAGSQGEEKGPKRIRVEGKAST