Information report for XP_016495590.1
Gene Details
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Functional Annotation
- Refseq: XP_016495590.1 — PREDICTED: uncharacterized protein LOC107814661
- TrEMBL: A0A1S4C388 — A0A1S4C388_TOBAC; uncharacterized protein LOC107814661
- STRING: XP_009589065.1 — (Nicotiana tomentosiformis)
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- MYB factors represent a family of proteins that include the conserved MYB DNA-binding domain.The first MYB gene identified was the ‘oncogene’ v-Myb derived from the avian myeloblastosis virus . Evidence obtained from sequence comparisons indicates that v-Myb may have originated from a vertebrate gene, which mutated once it became part of the virus. Many vertebrates contain three genes related to v-Myb c-Myb, A-Myb and B-Myb and other similar genes have been identified in insects, plants, fungi and slime moulds. The encoded proteins are crucial to the control of proliferation and differentiation in a number of cell types, and share the conserved MYB DNA-binding domain. This domain generally comprises up to three imperfect repeats, each forming a helix-turn-helix structure of about 53 amino acids. Three regularly spaced tryptophan residues, which form a tryptophan cluster in the three-dimensional helix-turn-helix structure, are characteristic of a MYB repeat. The three repeats in c-Myb are referred to as R1, R2 and R3; and repeats from other MYB proteins are categorised according to their similarity to either R1, R2 or R3.
- In contrast to animals, plants contain a MYB-protein subfamily that is characterised by the R2R3-type MYB domain. MYB proteins can be classified into three subfamilies depending on the number of adjacent repeats in the MYB domain (one, two or three). We refer to MYB-like proteins with one repeat as ‘MYB1R factors’, with two as ‘R2R3-type MYB’ factors, and with three repeats as ‘MYB3R’ factors.
Literature and News
Gene Resources
Homologs
- Actinidia chinensis: Achn202691, Achn153311
- Capsicum annuum: CA12g10380
- Fragaria vesca: mrna23202.1-v1.0-hybrid
- Glycine max: Glyma.20G178500.2.p, Glyma.20G178500.1.p
- Manihot esculenta: Manes.10G044400.1.p
- Nicotiana benthamiana: Niben101Scf15244g00004.1
- Petunia inflata: Peinf101Scf01784g02023.1
- Populus trichocarpa: Potri.008G041900.1
- Pyrus bretschneideri: Pbr023919.1
- Sesamum indicum: XP_011076995.1, XP_011084347.1, XP_011084346.1
- Solanum lycopersicum: Solyc04g049120.2.1
- Solanum melongena: Sme2.5_00266.1_g00018.1
Sequences
CDS Sequence:
- >XP_016495590.1|Nicotiana_tabacum|MYB|XP_016495590.1
ATGCCGTCGGAGCCATTACCTTGGGATCGGAAGGATTTCTTCAAGGAGAGGAGGCAGCACGATCGTTCAGAACTGTTGAGGGGTGGGCCCCGCTGGAGGGAGCCTCCGCCGCGCCACCACTACGGTTCTTCTCGTTGGGTTCCTGCTGATTTTCGCCCTACTAGAGGCGCCCCTCCTGGTCATGGTAAGCAGGGTAGTTGGCACATGTATCCAGAAGAATCCGGACATGGTTTCATGCCTTCTCGTTCCAATGAAAAGATTGTGGAAGATGAGAGCTGTCGGCAGTCTCGTGGGGATGGTGGTGGGAAGTATGGCAGCAGGAGTAGTAGCAGGGAAAATAGGTCTTTTGGTGGTCAGAGGGATTGGAGAAGAGGTGGTGGTCTCTCTTGGGAAGCTGCTGCATCCCCCAGTGGTCCTGTAAGACAGCATGATACTGCTACAAATGATCAGCGGCCAGCGGATGTTATGGTCCCACACAATTCTGAGCATGTCAACAATACATGGGAGCAGTCTCACTCTAGAGACCAGCACAATAAGAGTGGTAGCGCTAATGGAACAGCAAGCACGGGGCAAAGATTTGAGAGGGGGAACTCGCTGGGTTCAATTGAATGGAGGCCACTGAAATGGGCTCGGTCTGGAAGTTTATCGTCAAGGGGATCGTTAAGTCATTCAGGCAGCTCGAAAAGCATGGGAGTCGATTCTAACGAGACAAAGCCTGAGTTGCAGCCTGGAAACTCAAAAGCTCTGCAATCTCCTACCGGGGATGCAACTGCATGTGTAACTTCTGCTGCCCCTTCTGAAGAGACTTTTTCCCGGAAGAAGCCGCGCCTGGGTTGGGGTGAAGGACTGGCCAAGTATGAGAAGAAGAAAGTCCCCGAGGATAGTGCTGCTAAGGTGGGAGCTTGTATCTCTGGTGATAGTGTGGAACCTGGTCATCCTCACCCCTTGAACACGGCAGATAAAAGCCCAAGGGTTGCTGTTTCTCTGGATTGTCCCTCTCCTGCCACACCTTCGTCAGTTGCTTGTAGTTCTTCCCCAGGTCTTGAGGATAAACAACCTGTCAAGGCAACAAACATTGACCAGGATGTTGGTAATTTATGTGGCTCCCCCAGTATCATCTCCCAGTATCACTCTGAGGAATTTGCTTTTAACTTAGAGAATTTTGATCTTTCACAAATCTCCAATTTGAACTCTTCAATCAATGAATTGCTACAATCCGAGGACTCAAGTTCCGTGGACTCTGGTTTTATGAGATCAACGGCAGTGAACAAGTTGCTAATCTGGAAGAACGATATTTCAAAGGTGCTAGAAAAAACTGAAGTTGAGATTGATTCACTTGAGAATGAACTGAAGACAATGATATCTGAACCTGAATATACCCAGCTTGTTCCATCTGGGTCCTGTTCTCCACGAAAAGAGTGCAACTCAAACTCTCATGAAGATCGAGGCACTACTGATATAGCTTCTAGACCTGCTCCATTGCAAGTTGTTATACCCGAAGATGTAATTGGACAGGAAGGGACTAATATACAGGAAAAAGAGCACACTGAGGTGAAAGTTGAGGACATTGATAGTCCAGGCAGTGCAACTTCAAAGTTTGTTGAATTACCCTCAGAGAAAGATACGGCACCTGTTGATGCCATGAAACATGTTGGTGGAATGTTGATTTCAGATGACAGTAAGTCTTTAAGTAATAATGTGAAAGTGTGCAGTTCCACTGAGGACAAAGCTAAGTCTAGAAGTTCAGATGTGAAAGTGTGCAGTTTTAGTGAGGATATGGCAAGGGATACACTTGCCTGCGGGGAGAGCTCCCAGCTGACTGCCCGTTGTTCTCGACCTGTTTCTGATGGCAGTTTGAACTGTGGAAAAGATGCTTTATATAATTTGATATTAGCTGCCAACAAAGACACTGCATACAGAGCATTTGATGTATTCAAGAACCTACTGCCTGCTGGCAAATGCAGTTTTGATTTTTCAAGTGTGTCTTCTTTGCAAATTGATCATGCGGTTAAGGAAAGATTTGCTAGGAGGAAGCAGTTTAAACAGTTCAAAGAAAAGATCATTGCCCTCAAGTTTAGGGTACATCAGCACCTTTGGAAGGAAGATATGCGCATGCTTTCTGCAAGGAAGTTTCGTGCGAAGTCTCAGAAAAAGTTTGATTTTAGCCTGCGCCCTGTGCAGATAGGACATCAAAAACACCGTTCTACAGTTCGTTCACGATTTTTGACTACTGTTGGAAAGTCAAACCTGGTACCCTCATCGGAAGTATTGAACTTTGCAAGCAGGCTGCTCTCAGATCTTAGGACGAAGGTCTACAGGAACACGTTAAGGATGCCTGCTTTAGTTTTAGATCAGGAGAGGACGATGTCAAGGTTTATTTCAAAAAATAGTCTGGTGGAAGATCCCTGTGCTGTTGAGAAAGAAAGGTCTGTGATCAATCCATGGACGTCAGAGGAGAGAGAAATTTTTATTGACAAACTTGCTACCTTTGGGAAAGACTTCAGGAAGATCGCTTCTTTTCTTGATCATAAAACAACTGCTGATTGCATAGAGTTCTATTACAAGAATCACAAATCAGATTGTTTTGAGAGAACAAAGAGAAAATCAGATTATTCTAAACAAGCAAAAGTTTGTTCTGCAAATACCTACCTTGTTGCTTCTTCTGGGAAAAGATGGAACCGTGAGTCTAATTCTGTTTCTCTTGATATCTTAGGTGCTGCATCAGCAATTGCAGCTAATGTTGAGGATAGTATTGAAATTCAGCAAAAGTGTACGTCAAAGTACTCAGTTCGAATGGTCACTGAGCACAAGACGTCCAGACACAATGAGTTGGAGAGGTCAAACAGTCTTGATGTATGCCATAGTGAAAGAGAAAGAGTGGCTGCTGATGTTTTGACTGGTATCTGTGGTTCCTTATCATCAGAAGCTATGAGTTCCTGCATTACAAGTTCAATTGATCCCGCAGAAGGAAACCAGGAATGGAAGCACCAGAAAGTGGGTTCATTGACCAGATTGCCCCTGACTCCAGAGGTTACCCAGAGTGTTGATGATGAAACCTGTTCAGATGAGAGCTGTGGCGAGATGGATCCTACTGATTGGACGGATGAAGAGAAATCAATCTTCATCCAGGCTGTGTCAGCTTATGGCAAAGATTTTGTTATGGTATCAAGATGTGTTAGAACAAGATCCCGGGAGCAGTGCAAGATATTCTTTAGCAAGGCCAGGAAGTGTCTCGGACTGGATAAGATTCTTCCTGGACCTGGTAATTTGGTGAGGCAGGATGTTAATGGTGGAAACGATCCTGATGCTTGTGTTATGGAGACTGAGCTGTTTTGTAATGAAAAATCAAGTTTGAAGTTGAAAGAGCTATCTGATTTATGTGTGAGTGCAGGGATTTCAAAGCCTGATATGACCAGCTTTGATGATAAAGATGGGGCTGGAGAACTGGATTCAGTAGATACTGAACTTGTGTCAAAGAATTCAGTTCAGGTAAATTGTCATGTGGATAAGCAAAGGGTGGAATTTAACAGGCATTGTGAGATTCATATTGGTGCTTGTACTGAAAATGGCCGAGGGGATGAAAATATGGTTACGGTTTCTCAGGAAGGTGGTGTTCAAATTGATGGAGATGTCTCTGAGAATGGTCCGGCTGACATATTGTGTGCCAATAAAGTTTCTGGCGAGCATTTAGGGGAAGAAATAAAGGAAGTAGTGCCTGAACGTGATTTTAAAAATAGAAAGGCAGATAGCGCTGAAGTAAGTAGGTCAAACTTCTTTTTGGAAGATACCGCGTCCAGGAGTAATTCGCGTCTTGCTGCTGTTAGGGGAGGTGAATTGTGCCCTCTTAATGGATCTCAGAATACGACTCTTCTGGAATCTGATTCTGAGTGTAAGCCTGATGTCAATTACTCAGAAAGCAATATTTCAGTTCAGAGGAAAAAAATGCCTCGAGCTTCTAATGCTGTTTATTTATCAGAACTAGAACTTGAGAATGTTGGTGATCAGCAGCGTGAGAATGCTACTCAATCAGCTGAGCAGCCCTTGCCGAGTACCTCACAGATAGCCCATGTTGATTCCAGGCAGATTCTTGGCAGCTATTCATTGGGGGAGTCAGCCACGAAGGAGAGTGGAGATGGCTGTAGTACATCAGCTGCATTGCAAGAAATCCAGAAAGTGGGTAAGAATCTACGTTCAGATACGTCATCTACAACTGGTTTCTTTTTCCAGAGGTGCAATGGTACTAACCGAGAACAGACAGTAGGAGGTAGCTCATCAAATGTGGATAAACCTTGTAGGAATGGTGATGTGAAATTGTTTGGACAGATTCTCAGTAAACCATGCCCTCAAGCGAATACCAGTTCTAATGCGCAGCAGAGTGATAGTAGCAATCAGCAGTTGAAAGTTTGTAGCAATATGTCCAGTGCAACTCACAGTTTAGATGGGAATTCAGCCACTGCCAAATTCGAGCGCAATAACTTCCTGGGCTCTGAGAATCATCAAGTAAGAAGTTTTGGTTTCTGGGATGGAAATAGAATACAAACAGGGTTTTCTTCGTTGCCTGACTCTGCTATCTTGCTGGCAAAATATCCTGCTGCATTTGGTAATTATGCGATAGCTTCCAGCAAAGTGGAACAACAGCCTCCTTTGCATGGGGTTGTGAAGACAGCCACTGAGCGGAGTTTGAACGGTGTCCCTGTCTTTCCANCTGTCTTTCCGACTAGAGATGTAAGTAGCAACAATGGAGTAGCAGCAGCAGATTATCAAGTGTACAGGAGTCTAGATGTGCAGCCTTTTACTATAGAAATGAAACAGAGGCAAGATGCGGTGTTCTCTGAGATGCAAAGAAGAAATGGGTTCGATGTGGTGTCCAGTATGCAGCAACAGGCAAGGGGTGTGGTTGTTGGTAGAGGAGGGATTCTGGTGGGAGGGCAGTGCACCGGCGTCTCTGATCCGGTGGCTGCAATCAAAATGCATTATGCCAAAGCCGAACAATTTAGTGGGCAAGCGACAAGCATCATCAGAGAAGATGATTATTGGTTAAGTAAGGGGGACATCAGCAGGTAG
Protein Sequence:
- >XP_016495590.1|Nicotiana_tabacum|MYB|XP_016495590.1
MPSEPLPWDRKDFFKERRQHDRSELLRGGPRWREPPPRHHYGSSRWVPADFRPTRGAPPGHGKQGSWHMYPEESGHGFMPSRSNEKIVEDESCRQSRGDGGGKYGSRSSSRENRSFGGQRDWRRGGGLSWEAAASPSGPVRQHDTATNDQRPADVMVPHNSEHVNNTWEQSHSRDQHNKSGSANGTASTGQRFERGNSLGSIEWRPLKWARSGSLSSRGSLSHSGSSKSMGVDSNETKPELQPGNSKALQSPTGDATACVTSAAPSEETFSRKKPRLGWGEGLAKYEKKKVPEDSAAKVGACISGDSVEPGHPHPLNTADKSPRVAVSLDCPSPATPSSVACSSSPGLEDKQPVKATNIDQDVGNLCGSPSIISQYHSEEFAFNLENFDLSQISNLNSSINELLQSEDSSSVDSGFMRSTAVNKLLIWKNDISKVLEKTEVEIDSLENELKTMISEPEYTQLVPSGSCSPRKECNSNSHEDRGTTDIASRPAPLQVVIPEDVIGQEGTNIQEKEHTEVKVEDIDSPGSATSKFVELPSEKDTAPVDAMKHVGGMLISDDSKSLSNNVKVCSSTEDKAKSRSSDVKVCSFSEDMARDTLACGESSQLTARCSRPVSDGSLNCGKDALYNLILAANKDTAYRAFDVFKNLLPAGKCSFDFSSVSSLQIDHAVKERFARRKQFKQFKEKIIALKFRVHQHLWKEDMRMLSARKFRAKSQKKFDFSLRPVQIGHQKHRSTVRSRFLTTVGKSNLVPSSEVLNFASRLLSDLRTKVYRNTLRMPALVLDQERTMSRFISKNSLVEDPCAVEKERSVINPWTSEEREIFIDKLATFGKDFRKIASFLDHKTTADCIEFYYKNHKSDCFERTKRKSDYSKQAKVCSANTYLVASSGKRWNRESNSVSLDILGAASAIAANVEDSIEIQQKCTSKYSVRMVTEHKTSRHNELERSNSLDVCHSERERVAADVLTGICGSLSSEAMSSCITSSIDPAEGNQEWKHQKVGSLTRLPLTPEVTQSVDDETCSDESCGEMDPTDWTDEEKSIFIQAVSAYGKDFVMVSRCVRTRSREQCKIFFSKARKCLGLDKILPGPGNLVRQDVNGGNDPDACVMETELFCNEKSSLKLKELSDLCVSAGISKPDMTSFDDKDGAGELDSVDTELVSKNSVQVNCHVDKQRVEFNRHCEIHIGACTENGRGDENMVTVSQEGGVQIDGDVSENGPADILCANKVSGEHLGEEIKEVVPERDFKNRKADSAEVSRSNFFLEDTASRSNSRLAAVRGGELCPLNGSQNTTLLESDSECKPDVNYSESNISVQRKKMPRASNAVYLSELELENVGDQQRENATQSAEQPLPSTSQIAHVDSRQILGSYSLGESATKESGDGCSTSAALQEIQKVGKNLRSDTSSTTGFFFQRCNGTNREQTVGGSSSNVDKPCRNGDVKLFGQILSKPCPQANTSSNAQQSDSSNQQLKVCSNMSSATHSLDGNSATAKFERNNFLGSENHQVRSFGFWDGNRIQTGFSSLPDSAILLAKYPAAFGNYAIASSKVEQQPPLHGVVKTATERSLNGVPVFPXVFPTRDVSSNNGVAAADYQVYRSLDVQPFTIEMKQRQDAVFSEMQRRNGFDVVSSMQQQARGVVVGRGGILVGGQCTGVSDPVAAIKMHYAKAEQFSGQATSIIREDDYWLSKGDISR