Information report for Vradi08g18910.1
Gene Details
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Functional Annotation
- Refseq: XP_014511935.1 — transcription factor MYB41-like
- Refseq: XP_022641340.1 — transcription factor MYB41-like
- Swissprot: Q9M2D9 — MYB17_ARATH; Transcription factor MYB17
- TrEMBL: A0A1S3V0V5 — A0A1S3V0V5_VIGRR; transcription factor MYB41-like
- STRING: XP_007143400.1 — (Phaseolus vulgaris)
- GO:0055114 — Biological Process — oxidation-reduction process
- GO:0003677 — Molecular Function — DNA binding
- GO:0016705 — Molecular Function — oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
Family Introduction
- MYB factors represent a family of proteins that include the conserved MYB DNA-binding domain.The first MYB gene identified was the ‘oncogene’ v-Myb derived from the avian myeloblastosis virus . Evidence obtained from sequence comparisons indicates that v-Myb may have originated from a vertebrate gene, which mutated once it became part of the virus. Many vertebrates contain three genes related to v-Myb c-Myb, A-Myb and B-Myb and other similar genes have been identified in insects, plants, fungi and slime moulds. The encoded proteins are crucial to the control of proliferation and differentiation in a number of cell types, and share the conserved MYB DNA-binding domain. This domain generally comprises up to three imperfect repeats, each forming a helix-turn-helix structure of about 53 amino acids. Three regularly spaced tryptophan residues, which form a tryptophan cluster in the three-dimensional helix-turn-helix structure, are characteristic of a MYB repeat. The three repeats in c-Myb are referred to as R1, R2 and R3; and repeats from other MYB proteins are categorised according to their similarity to either R1, R2 or R3.
- In contrast to animals, plants contain a MYB-protein subfamily that is characterised by the R2R3-type MYB domain. MYB proteins can be classified into three subfamilies depending on the number of adjacent repeats in the MYB domain (one, two or three). We refer to MYB-like proteins with one repeat as ‘MYB1R factors’, with two as ‘R2R3-type MYB’ factors, and with three repeats as ‘MYB3R’ factors.
Literature and News
Gene Resources
Homologs
- Cajanus cajan: C.cajan_07372, C.cajan_07374
- Cicer arietinum: XP_012570165.1, XP_004496577.1, XP_004496837.1
- Glycine max: Glyma.20G158100.2.p, Glyma.20G158100.1.p, Glyma.10G236400.3.p, Glyma.10G236400.2.p, Glyma.10G236400.1.p, Glyma.10G236600.2.p, Glyma.10G236600.1.p, Glyma.20G157900.1.p, Glyma.20G157900.2.p
- Lotus japonicus: Lj5g3v2013880.1
- Medicago truncatula: Medtr1g100653.1, Medtr1g100667.1
Sequences
CDS Sequence:
- >Vradi08g18910.1|Vigna_radiata|MYB|Vradi08g18910.1
ATGGGGTGCCAGCCATTGGAAAAGGGAAAACCAAAACATAAGAAGGGGTTATGGTCACCAGAAGAAGACAATAAACTCAGAAACTACATCCTTAAACAAGGTCATGGCTGTTGGAGTTCTGTTCCCATTAAGGCAGGTTGGTTTCTTTCTTCTTTCCTGGTTGTGACCTTTTCTGGACCATACCACAGCTTGCAAAGAAGTGGAAAGAGTTGCAGATTAAGATGGATAAACTATCTGAGACCAGGACTAAAGAGAGGGAAGTTCACCAAACAGGAAGAAGAGACAATCCTCACCCTTCACCACATGCTAGGCAACAAGTGGTCACAGATATCACAGCATTTGCCAGGAAGAACAGATAATGAGATTAAAAACTACTGGCATTCATATTTGAAAAAGAAAGAGGCAAAAGCTAAGGAAAAGGGTTCTCATAACCTAATGAAGTATGCTAGCTCAAGCTCCGATACCATGGACTCTTCAAACTCTCTCCAAAATCTTGCAACTCAAGGTACACAGAGTTGTAACTTCACCAAAGAGGCTTGTCAAAGCTCCTTACCAAAACTGTTATTTGCTGAGTGGCTTTCATTGGATCAAGTAAACTCTGCAAATTCAGTTGACTCTTTTGGTTTGAGGAATGGATTTGATCAAAATTCAACTCTTCAGGAGGCTGCAATCCATGACATGTCAGATATACCCTTTGGTGGAGGGTACCACAGATGCTTGGCTAACATTTCAGCCCCTGAGATTTTAAATTCAGAGCTGAAGTATGCAAATCAGATGGTGGAAAATGGTTTCATCCTGCCTGGAGTTGACTTGATGAGTAGCAATTTCAGCATGAGCAATGATGCGATAATGAATTCTCACCAGCTTGAAATAATAAAGTCGTCTGTGAGGACTAAGCTAGCCCATAGAAGAGCCATAGAAGTAATTACAAGGATCATAATAGGTGTCCATTTCAAAGCAATCGCCTGTGGGAATCAAAATTTGGAGCTTTCAACTTCAACATACCTCAAGACGTGGAGAACACCATATTGTGGATTCAGGTTGAGGAGTAACCGATATGCATACTCTTCATTCGTATATCTCAGTCCTTGTGCTAGAGGCAATCCATCGCTCAACCTTCCAACTATGGTTACCTTAACCATTCCCTCTGAGATGGGTAAAGCACCTTGTTGTGAGAAACATGGAGTCAAAAGGGGAGCTTGGACTCCTGAAGAAGACCAAGCCTTGGTTGACTACATCAAGGAGCATGGTCATGGAAGTTGGCGTACACTTCCCAAACATGCAGGTCTCTTACGATGTGGAAAAAGTTGTCGGCTTCGGTGGATAAACTATCTTCGCCCTGGTATCAAGCGTGGCCCGTTTACCAGTGAAGAAGAAAGCACAATTGTTCAACTCCATGGCATGCTTGGCAACAGGTGGGCTGCTATAGCATCCCAATTACCTGGAAGAACAGACAATGAGATTAAGAACTATTGGAACACCCATCTAAAGAAGCGTCTCCTTCGATCATGTCATTCCCTAAGAGAAAAACAGTCGTGTCTGGTTCTGGATCAAACTATTGTCAAGTCTGAATCTCCTTCTACGCGTCACATGGTACAGTGGGAAAGTGTAAGAGTTGAGGCAGAGGCAAGGTTGTCAATGGAATCCTCGTTGCTCAATTCATGGCCAAAGAGTTCAACATGCCCTGATCATTTTCTTCATCTTTGGCATTCTGAGGTTGGAAAGTCATTTCGCATGGTCAAGGGAAAGGAAGGGATTGTGAGTCAAAGTCCTGTCTCACATCCTTCATCCTCATCTAAATTGGAGTCTTGTTCAGATGTGTCATTGCAGGTGAAAAACAGTACTAGTAGCCTCTATCCATGCATTGAGGATGTGAACATGGTTCATGAACAGATAAGTAGCTACAAACCAAAGCTTGATGACACGGCTGGGTCCGACTCAGGCAATTATGAATTTCTTGATACTTCAGATTCTGCATTAAAGCACCTACTACATATCTCTGATGATGTTGGATTCCTGGGACAGAATGATAATTTCTTGAATCTCCTTGATGCAACATGTGACCAAGATAGTTTCTTTCATATCTCTTCAGAGAAAGGCAATCTTTGA
Protein Sequence:
- >Vradi08g18910.1|Vigna_radiata|MYB|Vradi08g18910.1
MGCQPLEKGKPKHKKGLWSPEEDNKLRNYILKQGHGCWSSVPIKAGWFLSSFLVVTFSGPYHSLQRSGKSCRLRWINYLRPGLKRGKFTKQEEETILTLHHMLGNKWSQISQHLPGRTDNEIKNYWHSYLKKKEAKAKEKGSHNLMKYASSSSDTMDSSNSLQNLATQGTQSCNFTKEACQSSLPKLLFAEWLSLDQVNSANSVDSFGLRNGFDQNSTLQEAAIHDMSDIPFGGGYHRCLANISAPEILNSELKYANQMVENGFILPGVDLMSSNFSMSNDAIMNSHQLEIIKSSVRTKLAHRRAIEVITRIIIGVHFKAIACGNQNLELSTSTYLKTWRTPYCGFRLRSNRYAYSSFVYLSPCARGNPSLNLPTMVTLTIPSEMGKAPCCEKHGVKRGAWTPEEDQALVDYIKEHGHGSWRTLPKHAGLLRCGKSCRLRWINYLRPGIKRGPFTSEEESTIVQLHGMLGNRWAAIASQLPGRTDNEIKNYWNTHLKKRLLRSCHSLREKQSCLVLDQTIVKSESPSTRHMVQWESVRVEAEARLSMESSLLNSWPKSSTCPDHFLHLWHSEVGKSFRMVKGKEGIVSQSPVSHPSSSSKLESCSDVSLQVKNSTSSLYPCIEDVNMVHEQISSYKPKLDDTAGSDSGNYEFLDTSDSALKHLLHISDDVGFLGQNDNFLNLLDATCDQDSFFHISSEKGNL*