Information report for TRIUR3_09345-P1
Gene Details
|
|
Functional Annotation
- Refseq: XP_020164367.1 — transcription factor MYB108-like
- Swissprot: Q9C9G7 — MYB62_ARATH; Transcription factor MYB62
- TrEMBL: A0A3B6EAR0 — A0A3B6EAR0_WHEAT; Uncharacterized protein
- TrEMBL: A0A446N208 — A0A446N208_TRITD; Uncharacterized protein
- TrEMBL: M7Y993 — M7Y993_TRIUA; Transcription factor MYB21
- STRING: TRIUR3_09345-P1 — (Triticum urartu)
- GO:0009686 — Biological Process — gibberellin biosynthetic process
- GO:0009751 — Biological Process — response to salicylic acid
- GO:0016036 — Biological Process — cellular response to phosphate starvation
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- MYB factors represent a family of proteins that include the conserved MYB DNA-binding domain.The first MYB gene identified was the ‘oncogene’ v-Myb derived from the avian myeloblastosis virus . Evidence obtained from sequence comparisons indicates that v-Myb may have originated from a vertebrate gene, which mutated once it became part of the virus. Many vertebrates contain three genes related to v-Myb c-Myb, A-Myb and B-Myb and other similar genes have been identified in insects, plants, fungi and slime moulds. The encoded proteins are crucial to the control of proliferation and differentiation in a number of cell types, and share the conserved MYB DNA-binding domain. This domain generally comprises up to three imperfect repeats, each forming a helix-turn-helix structure of about 53 amino acids. Three regularly spaced tryptophan residues, which form a tryptophan cluster in the three-dimensional helix-turn-helix structure, are characteristic of a MYB repeat. The three repeats in c-Myb are referred to as R1, R2 and R3; and repeats from other MYB proteins are categorised according to their similarity to either R1, R2 or R3.
- In contrast to animals, plants contain a MYB-protein subfamily that is characterised by the R2R3-type MYB domain. MYB proteins can be classified into three subfamilies depending on the number of adjacent repeats in the MYB domain (one, two or three). We refer to MYB-like proteins with one repeat as ‘MYB1R factors’, with two as ‘R2R3-type MYB’ factors, and with three repeats as ‘MYB3R’ factors.
Literature and News
Gene Resources
Homologs
- Brachypodium distachyon: Bradi2g01960.2.p
- Hordeum vulgare: MLOC_65555.1
- Oryza sativa: MYB1
- Panicum virgatum: Pavir.5NG126700.1.p, Pavir.5KG118300.1.p
- Setaria italica: Seita.5G087200.1.p
- Setaria viridis: Sevir.5G085400.1.p
- Triticum aestivum: TRAES3BF034000040CFD_t1
- Zea mays: GRMZM2G096358_P01, GRMZM2G162709_P01
Sequences
CDS Sequence:
- >TRIUR3_09345-P1|Triticum_urartu|MYB|TRIUR3_09345-P1
ATGTCACGGAGGAAAGGAGCAGCAGCAGCAGGAGGAGGAGGAGCTGGGCCCATGGAGATGGCGGCCATGGAGGAGGAAGCTGCCGAGCTGAGGAGAGGCCCCTGGACGCTGGAGGAGGATAACCTCCTCATGAGCTACATTGCTTGCCACGGCGAGGGCCGCTGGAACCTCCTCGCCCGCTGCTCTGGGTTGAAGAGGACGGGGAAGAGCTGCCGCCTCCGGTGGCTGAACTACCTGAAGCCTGACATAAAGCGGGGGAACCTGACGGCGGAGGAGCAGCTGGTCATCCTGGAGCTCCACGCCAAGTGGGGCAACCGGTGGTCGCGGATCGCGCAGCACCTCCCCGGCCGCACCGACAACGAGATCAAGAACTACTGGCGGACCAGGGTGCAGAAGCAGGCGAGGCAGCTCAAGGTGGACGCCAACTCCGCCGTCTTCCGCGACGCCGTCCGCTGCTACTGGATGCCGCGCCTCCTCGACAAGATGTCCATGGCCGCTGCTTCCACGGCCGCGCCGCCGCCGTTGATGGAGCAGCACGGCCACGGCGTCGTGACCTCCTCGCAGTCGGCCGCAATCGGCAGCGACCAGCTCTGCTGCTACCCTCCCGCCGGCTTCGACCCGAGCCCGAGCGCGTCCACGTCGGGATCGACGGCGGCAGCCGCGCTGCAACCGGCGCCGGTGCCCTGCTTCTCCGAACTCAACTGGGAGGACCAGTACTGCTACCCGAGCGGAGGCGACCTCGACGGTGGCGCCGGTGGGATGGAGCTGGACTCGGCGGCGCTGCTGGGAAGCCTCGGCCTCGACGGGCTGGACCTAGGGCCGGCAGAGTCGTACCTCCCGGACGCTACGCTCCTCGACTACCTCAACTACTCGAGCTGCACCGCCAACGCCATGAACATGATGGTGATGAACGGCGGCAACTACAACAACAGCTACTGTGGCGGTGACGCCATGGTGGACGGCGATCACCACGACCCGACGACGGCGACGACGTGCCACGCGGCGAGGAAGCTGGCAGGCGAGTGGGGAGGAGGAATCTAG
Protein Sequence:
- >TRIUR3_09345-P1|Triticum_urartu|MYB|TRIUR3_09345-P1
MSRRKGAAAAGGGGAGPMEMAAMEEEAAELRRGPWTLEEDNLLMSYIACHGEGRWNLLARCSGLKRTGKSCRLRWLNYLKPDIKRGNLTAEEQLVILELHAKWGNRWSRIAQHLPGRTDNEIKNYWRTRVQKQARQLKVDANSAVFRDAVRCYWMPRLLDKMSMAAASTAAPPPLMEQHGHGVVTSSQSAAIGSDQLCCYPPAGFDPSPSASTSGSTAAAALQPAPVPCFSELNWEDQYCYPSGGDLDGGAGGMELDSAALLGSLGLDGLDLGPAESYLPDATLLDYLNYSSCTANAMNMMVMNGGNYNNSYCGGDAMVDGDHHDPTTATTCHAARKLAGEWGGGI