Information report for Psi011229
Gene Details
Functional Annotation
- Swissprot: Q9FKL2 — MYB36_ARATH; Transcription factor MYB36
- TrEMBL: B8LKH9 — B8LKH9_PICSI; Uncharacterized protein
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- MYB factors represent a family of proteins that include the conserved MYB DNA-binding domain.The first MYB gene identified was the ‘oncogene’ v-Myb derived from the avian myeloblastosis virus . Evidence obtained from sequence comparisons indicates that v-Myb may have originated from a vertebrate gene, which mutated once it became part of the virus. Many vertebrates contain three genes related to v-Myb c-Myb, A-Myb and B-Myb and other similar genes have been identified in insects, plants, fungi and slime moulds. The encoded proteins are crucial to the control of proliferation and differentiation in a number of cell types, and share the conserved MYB DNA-binding domain. This domain generally comprises up to three imperfect repeats, each forming a helix-turn-helix structure of about 53 amino acids. Three regularly spaced tryptophan residues, which form a tryptophan cluster in the three-dimensional helix-turn-helix structure, are characteristic of a MYB repeat. The three repeats in c-Myb are referred to as R1, R2 and R3; and repeats from other MYB proteins are categorised according to their similarity to either R1, R2 or R3.
- In contrast to animals, plants contain a MYB-protein subfamily that is characterised by the R2R3-type MYB domain. MYB proteins can be classified into three subfamilies depending on the number of adjacent repeats in the MYB domain (one, two or three). We refer to MYB-like proteins with one repeat as ‘MYB1R factors’, with two as ‘R2R3-type MYB’ factors, and with three repeats as ‘MYB3R’ factors.
Literature and News
Gene Resources
Homologs
- Cajanus cajan: C.cajan_43639
- Cicer arietinum: XP_004498936.1
- Citrullus lanatus: Cla020901
- Cucumis sativus: Cucsa.395340.1, Cucsa.353120.1
- Malus domestica: MDP0000322479
- Manihot esculenta: Manes.18G051300.1.p
- Medicago truncatula: Medtr1g017140.1
- Nicotiana benthamiana: Niben101Scf01693g01004.1
- Populus trichocarpa: Potri.002G113700.2
- Pyrus bretschneideri: Pbr034455.1, Pbr034465.1
Sequences
CDS Sequence:
- >Psi011229|Picea_sitchensis|MYB|gnl|UG|Psi#S50073736;PUT-183a-Picea_sitchensis-15855
ATGGGCCGAGCACCCTGCTGCGACAAAGCAAATGTCAAGAGAGGGCCGTGGTCTCCTGAAGAGGACACCATACTCAAAAATTTCGTAGAGAAGCATGGCACCGGAGGCAACTGGATCGCTTTGCCTCGCAAAGCAGGTTTGAAAAGGTGCGGCAAGAGCTGTAGACTGAGGTGGTTGAATTATTTGAGGCCTGATATCAAGCACGGTGACTTCTCAGAAGAAGAAGACACCATCATTTGCAGCCTCTATACCAGCATTGGAAGCAGATGGTCTATCATTGCAGCCCAGTTGCCCGGGAGAACAGACAACGACATAAAGAACTACTGGAACACGCAGCTGAAGAAAAAATTGCTTGGCAAATGCACCAAGGACAACGATAATCAGCAAATCCGGCGCTTACTGGCAAAAGAAGCAGCCAAAGGTGCGGGAATTAGGAGACCTTACAACGGTGATCATATTTCTTCAGAAACGGCCGCCATGTCTGCGTCAAACACTCAAAGCTCGTCTGAATCTCTTACAGAACCGGCCACTGGCGCAAATGCTATGAATAGCCCTTATGATGCCCTTGAAACGGGAAACGTCCCGGGATCGAGTTCGTCTGAGTCACAAACGGTCGGTTTTAATGCCACCCACGGTACCAGTACGCATTATTATGAACAAGGTTTCAAGCAAATCATGTCTCAGACAGATCAATATTCCACCCTGACAAGCATGCTGATGAGGCTCGAGAGTAACGAGAGCGATTGCTCAACCGACAATATTCCTTCTCTGGGCATCGATACAATTCCCAATGAAGTCCCTTTCTACGCTCCGACGGCCATGAATGTAAAAGCTGAAGCGATGGAGCGCCCATCTAGTGATCCTCAGCTCAATCAAGCCTGCAATTCAATGCCTGCACTCTGGGAAAGCTGTACTAGCAATTCCACATCTGGGGGCAACAATTATCAGTTCAGTACGTTGATGAACGAAGATACTGGCAATTTCAGCTACGGGCTCTCAACGGAAATGGATGAGCTCATATTGTATCGAAATCATGCAAGCAATGGCTCAATATTGCAGGTGAAAGAGGAGCCTGACTATTCCACAGCTGCAGCCTATTGGGCTTCTCAACTAGCTGAACCTGCAAAGGCCTCAGGCTTTACAGCAACAATATGTCCCAATTATTCATACATTCTACCATCATCTGAGGGTGGTATTGGTACTGGAACTACCGCCCAAGGGCTCTTTCAAGAGGGAATTATCTACTGA
Protein Sequence:
- >Psi011229|Picea_sitchensis|MYB|gnl|UG|Psi#S50073736;PUT-183a-Picea_sitchensis-15855
MGRAPCCDKANVKRGPWSPEEDTILKNFVEKHGTGGNWIALPRKAGLKRCGKSCRLRWLNYLRPDIKHGDFSEEEDTIICSLYTSIGSRWSIIAAQLPGRTDNDIKNYWNTQLKKKLLGKCTKDNDNQQIRRLLAKEAAKGAGIRRPYNGDHISSETAAMSASNTQSSSESLTEPATGANAMNSPYDALETGNVPGSSSSESQTVGFNATHGTSTHYYEQGFKQIMSQTDQYSTLTSMLMRLESNESDCSTDNIPSLGIDTIPNEVPFYAPTAMNVKAEAMERPSSDPQLNQACNSMPALWESCTSNSTSGGNNYQFSTLMNEDTGNFSYGLSTEMDELILYRNHASNGSILQVKEEPDYSTAAAYWASQLAEPAKASGFTATICPNYSYILPSSEGGIGTGTTAQGLFQEGIIY