Information report for PEQU_12592
Gene Details
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Functional Annotation
- Refseq: XP_020582804.1 — transcription factor MYB44-like
- Swissprot: Q9FDW1 — MYB44_ARATH; Transcription factor MYB44
- TrEMBL: A0A455LA91 — A0A455LA91_9ASPA; Transcription factor MYB44
- STRING: XP_008799576.1 — (Phoenix dactylifera)
- GO:0009414 — Biological Process — response to water deprivation
- GO:0009651 — Biological Process — response to salt stress
- GO:0009723 — Biological Process — response to ethylene
- GO:0009733 — Biological Process — response to auxin
- GO:0009737 — Biological Process — response to abscisic acid
- GO:0009739 — Biological Process — response to gibberellin
- GO:0010200 — Biological Process — response to chitin
- GO:0042742 — Biological Process — defense response to bacterium
- GO:0046686 — Biological Process — response to cadmium ion
- GO:0050832 — Biological Process — defense response to fungus
- GO:2000022 — Biological Process — regulation of jasmonic acid mediated signaling pathway
- GO:2000031 — Biological Process — regulation of salicylic acid mediated signaling pathway
- GO:0005634 — Cellular Component — nucleus
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
- GO:0044212 — Molecular Function — transcription regulatory region DNA binding
Family Introduction
- MYB factors represent a family of proteins that include the conserved MYB DNA-binding domain.The first MYB gene identified was the ‘oncogene’ v-Myb derived from the avian myeloblastosis virus . Evidence obtained from sequence comparisons indicates that v-Myb may have originated from a vertebrate gene, which mutated once it became part of the virus. Many vertebrates contain three genes related to v-Myb c-Myb, A-Myb and B-Myb and other similar genes have been identified in insects, plants, fungi and slime moulds. The encoded proteins are crucial to the control of proliferation and differentiation in a number of cell types, and share the conserved MYB DNA-binding domain. This domain generally comprises up to three imperfect repeats, each forming a helix-turn-helix structure of about 53 amino acids. Three regularly spaced tryptophan residues, which form a tryptophan cluster in the three-dimensional helix-turn-helix structure, are characteristic of a MYB repeat. The three repeats in c-Myb are referred to as R1, R2 and R3; and repeats from other MYB proteins are categorised according to their similarity to either R1, R2 or R3.
- In contrast to animals, plants contain a MYB-protein subfamily that is characterised by the R2R3-type MYB domain. MYB proteins can be classified into three subfamilies depending on the number of adjacent repeats in the MYB domain (one, two or three). We refer to MYB-like proteins with one repeat as ‘MYB1R factors’, with two as ‘R2R3-type MYB’ factors, and with three repeats as ‘MYB3R’ factors.
Literature and News
Gene Resources
Homologs
- Citrus sinensis: orange1.1g022144m
- Daucus carota: DCAR_025760
- Gossypium arboreum: Cotton_A_26928_BGI-A2_v1.0
- Gossypium hirsutum: Gh_D11G0511, Gh_A11G0440
- Manihot esculenta: Manes.18G042000.1.p
- Musa acuminata: GSMUA_Achr3P13070_001, GSMUA_Achr4P20150_001, GSMUA_Achr1P26140_001
- Populus trichocarpa: Potri.002G122600.1, Potri.014G022500.1
- Prunus mume: XP_008220277.1
- Prunus persica: Prupe.1G430000.1.p
- Salvia miltiorrhiza: SMil_00013392-RA_Salv
- Sesamum indicum: XP_011074411.1
- Vitis vinifera: GSVIVT01009424001
- Ziziphus jujuba: XP_015884347.1
Sequences
CDS Sequence:
- >PEQU_12592|Phalaenopsis_equestris|MYB|PEQU_12592
ATGGCGGCGAGATGCAGAGATGTAGATCGGATCAAGGGGCCATGGAGTCCCGAGGAAGACGACATGTTACAGAGACTGGTAGTGAAGCACGGGGCGAGAAACTGGTCTTTAATCAGCAAATCGATTCCAGGAAGGTCTGGGAAATCATGCCGGCTACGGTGGTGCAACCAGCTCTCGCCGACGGTGGAGCACCGCCCTTTCACGGCGGACGAAGACAGAACCATCATCACCGCCCACCAGCGCTTCGGGAACAAGTGGGCGACCATCGCGCGAATGCTGAATGGTCGCACGGATAACGCCATTAAGAATCACTGGAACTCCACTCTCAAGCGGAAGTATTCTTCTTCCTCTGCGCCGGAGGAAGAAGAAAGGTTGGTCAAGAGGGCGAATAGTGGCGGGCTGAGTTTCAGTCCAGGGAGCCCGTCGTCGTCTGATCTCAGTGATTCGAGTCATCACAGCCAAGCGTTGATCACGCCGCCGCCGTTGGTGGCTCCAGTATACCGACCGGTGCCGAGAACAGGGTGTATCGTTCCGTCGCAAATCTCGCCGGCGATCGACACTGCGGCTGCGTCGAACTCTAGTGGCAGCGGAAGCAATATGACCGACGATCCCGTTACCTCTCTCACTCTCTCTCTTCCCGGATCGAGTTCGGATCAGTCTGAAGCTTCCGATCACCGCCGTTGTAACCAGAGCGATCTCCTTCTCATGGCACCACCGACTTCGGAAACCGAAAAATTGCAGCTTCCAGCGGCGGCGGCGACGGCGACGGCGGTGGTGCCGTTCAGTAAGGAATTCATGGCGATGATGCAAGAGATGATCCGCCAAGAGGTGAGGAATTTCATGAGTGGGATGGAGCAGAGAGATTGGATGAATATGAACATGAATCAATCGACGGAGAGCTTGCGGAACAGTGTTATTAAGAGGATTGGAATCACGAAGATCGAGTAG
Protein Sequence:
- >PEQU_12592|Phalaenopsis_equestris|MYB|PEQU_12592
MAARCRDVDRIKGPWSPEEDDMLQRLVVKHGARNWSLISKSIPGRSGKSCRLRWCNQLSPTVEHRPFTADEDRTIITAHQRFGNKWATIARMLNGRTDNAIKNHWNSTLKRKYSSSSAPEEEERLVKRANSGGLSFSPGSPSSSDLSDSSHHSQALITPPPLVAPVYRPVPRTGCIVPSQISPAIDTAAASNSSGSGSNMTDDPVTSLTLSLPGSSSDQSEASDHRRCNQSDLLLMAPPTSETEKLQLPAAAATATAVVPFSKEFMAMMQEMIRQEVRNFMSGMEQRDWMNMNMNQSTESLRNSVIKRIGITKIE