Information report for MELO3C009257P1
Gene Details
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Functional Annotation
- Refseq: XP_008442548.1 — PREDICTED: myb-related protein A-like
- Refseq: XP_008442549.1 — PREDICTED: myb-related protein A-like
- TrEMBL: A0A1S3B6L2 — A0A1S3B6L2_CUCME; myb-related protein A-like
- STRING: XP_008442548.1 — (Cucumis melo)
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- MYB factors represent a family of proteins that include the conserved MYB DNA-binding domain.The first MYB gene identified was the ‘oncogene’ v-Myb derived from the avian myeloblastosis virus . Evidence obtained from sequence comparisons indicates that v-Myb may have originated from a vertebrate gene, which mutated once it became part of the virus. Many vertebrates contain three genes related to v-Myb c-Myb, A-Myb and B-Myb and other similar genes have been identified in insects, plants, fungi and slime moulds. The encoded proteins are crucial to the control of proliferation and differentiation in a number of cell types, and share the conserved MYB DNA-binding domain. This domain generally comprises up to three imperfect repeats, each forming a helix-turn-helix structure of about 53 amino acids. Three regularly spaced tryptophan residues, which form a tryptophan cluster in the three-dimensional helix-turn-helix structure, are characteristic of a MYB repeat. The three repeats in c-Myb are referred to as R1, R2 and R3; and repeats from other MYB proteins are categorised according to their similarity to either R1, R2 or R3.
- In contrast to animals, plants contain a MYB-protein subfamily that is characterised by the R2R3-type MYB domain. MYB proteins can be classified into three subfamilies depending on the number of adjacent repeats in the MYB domain (one, two or three). We refer to MYB-like proteins with one repeat as ‘MYB1R factors’, with two as ‘R2R3-type MYB’ factors, and with three repeats as ‘MYB3R’ factors.
Literature and News
Gene Resources
Homologs
- Citrullus lanatus: Cla017897
- Cucumis sativus: Cucsa.175460.4, Cucsa.175460.3, Cucsa.175460.2, Cucsa.175460.1
- Glycine max: Glyma.18G181100.1.p, Glyma.18G181100.2.p
- Gossypium arboreum: Cotton_A_12042_BGI-A2_v1.0
- Gossypium hirsutum: Gh_A09G1458
- Juglans regia: WALNUT_00014863-RA
- Lotus japonicus: Lj0g3v0141409.2, Lj0g3v0141409.1
- Malus domestica: MDP0000219581, MDP0000197330
- Prunus mume: XP_008240967.1
- Prunus persica: Prupe.6G255400.1.p, Prupe.6G255400.2.p
- Pyrus bretschneideri: Pbr006264.1
- Ziziphus jujuba: XP_015896992.1, XP_015896991.1
Sequences
CDS Sequence:
- >MELO3C009257P1|Cucumis_melo|MYB|MELO3C009257P1
ATGGAAGAGGCGAAACAAGAAGAGTGTTGTCTTGAAAATAAACAATCTACTGCTGCTACGAGTTCCTCTGTTTCTGAAGGTAGTGGCAGCGCAACTGCCAAGTCTCCTTGGATGTGTAGTCCAGCATCAACATCTCCTTCTCATAGGAGGACCAGTGGCCCCATTCGTCGAGCTAAGGGTGGCTGGACTCCTCAAGAGGATGAGACATTGAGAAATGCCGTTGCAGCCTTCAAAGGGAAGAATTGGAAGAAAATAGCTGAGTACTTCCATGATAGATCAGAAGTTCAGTGTCTGCATAGATGGCAGAAGGTTCTCAATCCAGATCTTGTTAAGGGACCATGGACTCAGGAGGAAGATGATAAAATTATTGAACTGGTTTCGAAGTATGGCCCTACCAAATGGTCTTTGATAGCAAAGTCTTTACCTGGTCGCATAGGGAAACAATGCCGAGAAAGTTCCCAGAATGGTGCTAGAGACACTACTAAGACTCCACCTACCAAAAGGTTTCCTCCTTACTCAAGTAAGGGATCGGATTCAACTGCCCAAACATCATCAGGTAACACAGACTTGTACAAACTGGACGAAAGCTGTAAGGACCAGATTGAGTCGTCAGCACCTCCTGATGAAGATATGATTGCCTCAACAAGTGGGGTTCTGAATGAGTCCGCTGATTCTAGACATGTCAAACGCTGGGCAGGACCTTCAAATATCATGGATCCAAGATGCAGGAAATCTGGGACATCAAGAAAGAATGGGACTATAACCCACGGTGAAGCAGAGAATGAAATTGGCAAATTTGATGAAGATAAAATTCTACGAACGCCTTCAAGATTTGAATCCCCAAAGTATGGTTCTTTGTACTACGAGCCACCCCAATTAGAAAGTAGTATTCCAGTAGATTCAGAACTTTTAAGCATGTACATGCTCGAGACAAATAATAGTTCAATCACTTCGCCTATTGGTATCTTCACTCCCCCTTGTGTGAAGACTAGAAACTTGAGTATACACAGTCCAGAGTCAATATTGAGAATTGCGGCTAGAAGTTTCCCCAGCACTCCCTCAATATTACGCAAAAGAAAAACTGAAACTCAAGCTTGTCTCCCTCCTAAGGTGATGCAAGACGTGGAATCAGAAGCAACAGTCAAGGACATCTCCCGTGAAGCTGGTCACGATGAAACACTTAATAATAGTGACAGCAGATTGGGTTCACCAAATGGAAGCTTATGTGACAGTCCTAGTCCTAGTAATGATCATAGCCCCAGCAGATCAAACAGCAAGGCTTTCAATGCATCTCCTCCATACCGGTTAACATCCAAGCGGACAGCTATTTCAAGATCTGTGGAAAAACAACTTGAGTTTGCATTTGACAAGGAGAAGAACAACCATACTATCAAGTCACTAGAATCAGATGAGATCTCCACCAGATAA
Protein Sequence:
- >MELO3C009257P1|Cucumis_melo|MYB|MELO3C009257P1
MEEAKQEECCLENKQSTAATSSSVSEGSGSATAKSPWMCSPASTSPSHRRTSGPIRRAKGGWTPQEDETLRNAVAAFKGKNWKKIAEYFHDRSEVQCLHRWQKVLNPDLVKGPWTQEEDDKIIELVSKYGPTKWSLIAKSLPGRIGKQCRESSQNGARDTTKTPPTKRFPPYSSKGSDSTAQTSSGNTDLYKLDESCKDQIESSAPPDEDMIASTSGVLNESADSRHVKRWAGPSNIMDPRCRKSGTSRKNGTITHGEAENEIGKFDEDKILRTPSRFESPKYGSLYYEPPQLESSIPVDSELLSMYMLETNNSSITSPIGIFTPPCVKTRNLSIHSPESILRIAARSFPSTPSILRKRKTETQACLPPKVMQDVESEATVKDISREAGHDETLNNSDSRLGSPNGSLCDSPSPSNDHSPSRSNSKAFNASPPYRLTSKRTAISRSVEKQLEFAFDKEKNNHTIKSLESDEISTR*