Information report for MELO3C002292P1
Gene Details
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Functional Annotation
- Refseq: XP_008438768.1 — PREDICTED: transcription factor MYB86-like
- Swissprot: Q8LPH6 — MYB86_ARATH; Transcription factor MYB86
- TrEMBL: A0A1S3AXV0 — A0A1S3AXV0_CUCME; transcription factor MYB86-like
- STRING: XP_008438768.1 — (Cucumis melo)
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- MYB factors represent a family of proteins that include the conserved MYB DNA-binding domain.The first MYB gene identified was the ‘oncogene’ v-Myb derived from the avian myeloblastosis virus . Evidence obtained from sequence comparisons indicates that v-Myb may have originated from a vertebrate gene, which mutated once it became part of the virus. Many vertebrates contain three genes related to v-Myb c-Myb, A-Myb and B-Myb and other similar genes have been identified in insects, plants, fungi and slime moulds. The encoded proteins are crucial to the control of proliferation and differentiation in a number of cell types, and share the conserved MYB DNA-binding domain. This domain generally comprises up to three imperfect repeats, each forming a helix-turn-helix structure of about 53 amino acids. Three regularly spaced tryptophan residues, which form a tryptophan cluster in the three-dimensional helix-turn-helix structure, are characteristic of a MYB repeat. The three repeats in c-Myb are referred to as R1, R2 and R3; and repeats from other MYB proteins are categorised according to their similarity to either R1, R2 or R3.
- In contrast to animals, plants contain a MYB-protein subfamily that is characterised by the R2R3-type MYB domain. MYB proteins can be classified into three subfamilies depending on the number of adjacent repeats in the MYB domain (one, two or three). We refer to MYB-like proteins with one repeat as ‘MYB1R factors’, with two as ‘R2R3-type MYB’ factors, and with three repeats as ‘MYB3R’ factors.
Literature and News
Gene Resources
Homologs
- Cajanus cajan: C.cajan_09185
- Citrullus lanatus: Cla003441
- Cucumis sativus: Cucsa.098700.1
- Glycine max: Glyma.05G040700.1.p
- Juglans regia: WALNUT_00028463-RA, WALNUT_00021898-RA
- Lotus japonicus: Lj4g3v1440760.1
- Malus domestica: MDP0000256645, MDP0000852549
- Manihot esculenta: Manes.14G061700.1.p, Manes.06G109000.1.p
- Populus trichocarpa: Potri.015G082700.1, Potri.012G084100.1
- Prunus mume: XP_008239319.1
- Prunus persica: Prupe.5G167100.3.p, Prupe.5G167100.1.p, Prupe.5G167100.2.p
- Pyrus bretschneideri: Pbr039864.1, Pbr001888.1
- Ricinus communis: 30147.m013885
- Ziziphus jujuba: XP_015882464.1
Sequences
CDS Sequence:
- >MELO3C002292P1|Cucumis_melo|MYB|MELO3C002292P1
ATGGGGCGCCATTCTTGCTGTCTAAAGCAGAAACTAAGGAAAGGGCTTTGGTCACCTGAAGAAGATGAAAAACTCTTCAATTACATTACTCGTTTTGGTGTTGGCTGCTGGAGTTCTGTCCCTAAACTTGCTGGTTTGCAAAGGTGTGGTAAAAGTTGTAGACTGAGATGGATCAATTACTTAAGACCTGATTTGAAAAGAGGAATGTTCTCTCAACAAGAAGAGGATCTCATTATCAGTTTACACGAAGTCCTTGGGAACAGATGGGCTCAGATTGCCGCTCAATTACCGGGAAGAACAGATAATGAGATTAAGAATTTTTGGAATTCAAGCTTGAAGAAGAAACTAATGAAGCAAGGAATTGACCCAAATACTCACAAGCCAATAATCAACATTCAAGAAATCAAAGAGAAGAAGATCTTTGAAGATAGAGAATTCCCTCAAATCCCACCGGTTCAAGGAGTACTCGGGGGTGGCGGCGGAGTCAGCTCCGCTGTCGGGGGGAACCAAGGACCAGCATTTCTCCTCGGTGGTACCGACTACTACGATGGCGGGTTAACGACGACCACACCAATTATTCGAGACCATTTGATGAACAACAAACAAGCTTTGGTTGATTCACTCTGTTTTTACGAGTTCCAAACAGGCCTGGATTCTTGCAACTACAACAACACCAACAACAACAACAACAATTTCGAAACCACTCAGTACCAAACGAATATGCAGAGTTTCGGATTCAATTCGGTGCCGAGTTTGACAAATTCCGATCACGGAAGCTTGTCGGGGACAGAGTTTTCAGAGAATTCGGGTTCGAATATCAGCAACTATGGAGGATTCTACATGAACAACAACAACAACAATAATGGAGCAGTGGATAATTCAACATTTTGTTCATGGGAAAATGATAACAATAAATTGGAAAGCTATTTTCAAATTGAAGTGAATAATAATAACAACAATAATAATAACAATGGGATAAAGTCAGAGGAATTGAAGAAAGTAACAGGAGGAGGTTCTTCAATGTTCGATGGGCAGCTAATACAGAGTCGAAGCTCAATAGATTTCAGTAGCTATCCATTAATGTCACTCTCACAACATATTACTGCAGCCAATTTTGGGGTTTTCCACCATTTCTGA
Protein Sequence:
- >MELO3C002292P1|Cucumis_melo|MYB|MELO3C002292P1
MGRHSCCLKQKLRKGLWSPEEDEKLFNYITRFGVGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGMFSQQEEDLIISLHEVLGNRWAQIAAQLPGRTDNEIKNFWNSSLKKKLMKQGIDPNTHKPIINIQEIKEKKIFEDREFPQIPPVQGVLGGGGGVSSAVGGNQGPAFLLGGTDYYDGGLTTTTPIIRDHLMNNKQALVDSLCFYEFQTGLDSCNYNNTNNNNNNFETTQYQTNMQSFGFNSVPSLTNSDHGSLSGTEFSENSGSNISNYGGFYMNNNNNNNGAVDNSTFCSWENDNNKLESYFQIEVNNNNNNNNNNGIKSEELKKVTGGGSSMFDGQLIQSRSSIDFSSYPLMSLSQHITAANFGVFHHF*