Information report for MA_24271g0020
Gene Details
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Functional Annotation
- TrEMBL: A5JYF5 — A5JYF5_PICGL; R2R3-MYB transcription factor MYB11
- GO:0009733 — Biological Process — response to auxin
- GO:0009737 — Biological Process — response to abscisic acid
- GO:0009751 — Biological Process — response to salicylic acid
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- MYB factors represent a family of proteins that include the conserved MYB DNA-binding domain.The first MYB gene identified was the ‘oncogene’ v-Myb derived from the avian myeloblastosis virus . Evidence obtained from sequence comparisons indicates that v-Myb may have originated from a vertebrate gene, which mutated once it became part of the virus. Many vertebrates contain three genes related to v-Myb c-Myb, A-Myb and B-Myb and other similar genes have been identified in insects, plants, fungi and slime moulds. The encoded proteins are crucial to the control of proliferation and differentiation in a number of cell types, and share the conserved MYB DNA-binding domain. This domain generally comprises up to three imperfect repeats, each forming a helix-turn-helix structure of about 53 amino acids. Three regularly spaced tryptophan residues, which form a tryptophan cluster in the three-dimensional helix-turn-helix structure, are characteristic of a MYB repeat. The three repeats in c-Myb are referred to as R1, R2 and R3; and repeats from other MYB proteins are categorised according to their similarity to either R1, R2 or R3.
- In contrast to animals, plants contain a MYB-protein subfamily that is characterised by the R2R3-type MYB domain. MYB proteins can be classified into three subfamilies depending on the number of adjacent repeats in the MYB domain (one, two or three). We refer to MYB-like proteins with one repeat as ‘MYB1R factors’, with two as ‘R2R3-type MYB’ factors, and with three repeats as ‘MYB3R’ factors.
Literature and News
Gene Resources
Homologs
- Beta vulgaris: Bv3_049670_hwcc.t1
- Fragaria vesca: mrna30725.1-v1.0-hybrid
- Gossypium hirsutum: Gh_D05G2544
- Hordeum vulgare: MLOC_52134.2
- Malus domestica: MDP0000492221
- Manihot esculenta: Manes.16G019700.1.p
- Nicotiana benthamiana: Niben101Scf04133g00001.1
- Prunus mume: XP_008224927.1
- Prunus persica: Prupe.4G035100.1.p
- Pyrus bretschneideri: Pbr001520.1, Pbr000268.1
- Triticum aestivum: Traes_6AL_2BA02CAA9.1, Traes_6BL_0D6CD031E.1, Traes_6DL_8BF29D46C.1
Sequences
CDS Sequence:
- >MA_24271g0020|Picea_abies|MYB|MA_24271g0020
ATGGGGCGTGCACCTTGTTGCGATAAAGATGGTCTAAAGAAGGGTCCATGGACGCCTGAGGAAGACCAGAAGCTTACTGATTATATTCAACGCCATGGCCATGGAAGCTGGCGTACACTTCCTAAACATGCAGGACTGTTGAGGTGTGGGAAAAGTTGCAGGTTGCGATGGACGAACTACCTCAGACCGGATATAAAGCGAGGGAAGTTTTCATTTGAAGAAGAGCAGACGATAGTTCAGCTTCATGGTGTTCTCGGAAACAAATGGTCTGCAATAGCATCACATCTTCCAGGAAGGACGGATAATGAGATAAAGAATTACTGGAACACCCATTTGAAGAAACGCCTCCTTCAGATGGGAATCGACCCTGTCACTCACAGGCCAAGGATTGATCTCTTTAATTTCTCCAACATGACTCAGTTGCTGGCTCCTGCTAGCTTAAGCCACATGGCTGCTCAGTGGGAAAGGGCAAGGCTAGAAGCTGTGACTACAGACTATTTGAGGGTTCTTGCAGCTTACAGATCGGCAGCCATGATGCAGCAGGCTTCTCACAGTCAGAGCTCTACAATGGACGCAGATCATCTGATGAGTTACTTGAGGAATCAGCTTGGGGATGCAGCCTTCTGCAATATGCCGGATAACATGAACTCTGCCATGGCTCAGGCTAATTGGGCCCTAAATTCTGAGAATCTGGGATCTTCAGATTCTAATGCATTAGCGACTCAGATTATTATGGAACAGCTGCAAGTTCCGGCTGCTCAGATTATGCGAAATTTGCAAAGCCAAACGCAAAATACTGCAGAACTGTCTGCATGCTCCTTGCCTCTCAATGGCACTTCGATGACGCAGCATTCATCGCCCACTTCTACTCTTTCTTCACTTGATGGATTTCATACCTTGAAAGCCGAACAGCGCAACAACAATAGCAATAAAAATAATGTGCCCAATAGCCATGAGTCTACCAAAATCAATAACCAGGCTCTTCTGCAGGACCAGGGCTATGACAATCTGATGAATGCTTCAGCTTCCCTAGTTCAGCAGCATTCAAGAAGCCAGGACAACAACTCCCTAAGTACTGATCAGCTTGTAACGAGTCCAATACTGTGGCCTGAGGAGCAATTCCTTGGCATTTCCAAGAACAATAATTCAGAATCTGTACCTGCACTTGTGTCGACGACCTCCTCTCCAAATATATTCAATGACACCTCCGACATGTTTCACGATGCCTCGCCTGTTCAAAATTCTCAGAATTGCATGAGAAGTGATTGTATAAGCACTAATGGATATGGGCTTCCAGCAGACCTTTTCTTGGATTTTGGTCTTGAGACTACAAAGCAGCAGAATGTGGAGACAATGGCCCCTGCAACATCCACAACACACGTGTTATCAGGGTCGTCTTCCTGGTCAGAGATGCAGAATTCTCTGTTATCAGGGTCGTCTTCCTGGTCAGAGATGCAGAATTCTCATGAGGATGGCGGAGATTACTGGAGTAATATGCTCAAATATGTTGGGGAAAGCAGTATCAGTAATTCAACTCTTTGA
Protein Sequence:
- >MA_24271g0020|Picea_abies|MYB|MA_24271g0020
MGRAPCCDKDGLKKGPWTPEEDQKLTDYIQRHGHGSWRTLPKHAGLLRCGKSCRLRWTNYLRPDIKRGKFSFEEEQTIVQLHGVLGNKWSAIASHLPGRTDNEIKNYWNTHLKKRLLQMGIDPVTHRPRIDLFNFSNMTQLLAPASLSHMAAQWERARLEAVTTDYLRVLAAYRSAAMMQQASHSQSSTMDADHLMSYLRNQLGDAAFCNMPDNMNSAMAQANWALNSENLGSSDSNALATQIIMEQLQVPAAQIMRNLQSQTQNTAELSACSLPLNGTSMTQHSSPTSTLSSLDGFHTLKAEQRNNNSNKNNVPNSHESTKINNQALLQDQGYDNLMNASASLVQQHSRSQDNNSLSTDQLVTSPILWPEEQFLGISKNNNSESVPALVSTTSSPNIFNDTSDMFHDASPVQNSQNCMRSDCISTNGYGLPADLFLDFGLETTKQQNVETMAPATSTTHVLSGSSSWSEMQNSLLSGSSSWSEMQNSHEDGGDYWSNMLKYVGESSISNSTL