Information report for EMT32359
Gene Details
Functional Annotation
- Refseq: XP_020178667.1 — dnaJ homolog subfamily C member 2
- Refseq: XP_020178668.1 — dnaJ homolog subfamily C member 2
- Refseq: XP_020178669.1 — dnaJ homolog subfamily C member 2
- TrEMBL: M8CDA0 — M8CDA0_AEGTA; DnaJ homolog subfamily C member 2
- STRING: EMT32359 — (Aegilops tauschii)
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- MYB factors represent a family of proteins that include the conserved MYB DNA-binding domain.The first MYB gene identified was the ‘oncogene’ v-Myb derived from the avian myeloblastosis virus . Evidence obtained from sequence comparisons indicates that v-Myb may have originated from a vertebrate gene, which mutated once it became part of the virus. Many vertebrates contain three genes related to v-Myb c-Myb, A-Myb and B-Myb and other similar genes have been identified in insects, plants, fungi and slime moulds. The encoded proteins are crucial to the control of proliferation and differentiation in a number of cell types, and share the conserved MYB DNA-binding domain. This domain generally comprises up to three imperfect repeats, each forming a helix-turn-helix structure of about 53 amino acids. Three regularly spaced tryptophan residues, which form a tryptophan cluster in the three-dimensional helix-turn-helix structure, are characteristic of a MYB repeat. The three repeats in c-Myb are referred to as R1, R2 and R3; and repeats from other MYB proteins are categorised according to their similarity to either R1, R2 or R3.
- In contrast to animals, plants contain a MYB-protein subfamily that is characterised by the R2R3-type MYB domain. MYB proteins can be classified into three subfamilies depending on the number of adjacent repeats in the MYB domain (one, two or three). We refer to MYB-like proteins with one repeat as ‘MYB1R factors’, with two as ‘R2R3-type MYB’ factors, and with three repeats as ‘MYB3R’ factors.
Literature and News
Gene Resources
Homologs
- Brachypodium distachyon: Bradi5g07300.1.p
- Hordeum vulgare: MLOC_6586.1
- Panicum virgatum: Pavir.9NG809400.1.p
- Setaria italica: Seita.7G065700.2.p, Seita.7G065700.1.p
- Setaria viridis: Sevir.7G072200.2.p, Sevir.7G072200.1.p
- Triticum aestivum: Traes_1DL_B7E76AFE6.1, Traes_1AL_206AE5B76.1, Traes_1BL_405FE0DBA.2
Sequences
CDS Sequence:
- >EMT32359|Aegilops_tauschii|MYB|EMT32359
ATGACGTGGGAGTGGTTGAGTTTCTCATTTGCGGGGGTAGTTTCCTTTGAGTTGCCAACGTGTGGCATTGCATTAAATGAGCAGTTCTCGAGGAATTTGGGAGCATACGCTAGAGAATTAAGGCCTTCCAGTTGGGAGAATCAAGAAGGGGAGGTGGAACTAGCACCTTCCAAGTATGAACCTGCTGGTCATTCTTTCCATGCGGTCGCACTGAAGCTCCGTGGTCTTGATGAGAAAGAAGACACTGAAACTGATGATCGTAGTGTGTCATCAGATGACAAGAGCCAAGATTTTTCTGCTGGTTCAGATAACTTCAGCAGCAAAGGAAAGAAGAAGTCTGGTTCTGGAAGTCAACAACAAGATCACTATGCATTGCTTGGATTGGGCAACTTGCGGTTCTTGGCCACCGAAGATCAGATTCGGAAGAGTTACCGTGACATGGCTCTTAAACATCATCCAGACAAGCAGGCTGCTCTTCTTCTCCATGAGACAACAGAGGCAGCAAAGCAAGCAAAGAAGGATGAGATAGAGAGCCATTTCAAGGCCATACAGGAAGCTTACGAGGTCCTCATGGATCCTACCAAGAGAAGGATTTTTGACTCAACTGATGAGTTTGATGATGATATCCCAACTGACTGTGCACCGCAAGACTTCTTTAAGGTCTTCGGACCAGCCTTCATGAGGAATGGCCGATGGTCTGTTACCCAGCCAATTCCTTCTTTGGGAGATGATGCTACTCCTGTAGTGGATGTTGACCAGTTCTACAATTTCTGGTATAACTTCAAGAGTTGGAGGGAATTTCCACATGAAGATGAGTATGACTTGGAGCAAGCTGAGTCTCGTGAACACAAGAGATGGATGGAGAGGCAGAATGCGAAGATACAAGAGAAGGCCAAAAAGGTAGAGTATACGCGAGTACGTAATCTTGTTGACAATGCGTACAGGAAAGACCCAAGGATCCAGAGGAGAAAGGAGCAGGAGAAGGCTGAGAAACAGAGGAGAAAGGAGGCAAAATACATGGCCAAGAAACTGCAGGAGGAGGAAGCTGCAAGGGCTGCAGAAGAGGAAAGGAAGAGGAAAGAAGAGGAGGCGAAGATAGCCGCAGCAGCTGCTGACATTCGAAAGAAGTTGAAGGAAAAGGAGAAGAAGTTGCTACGCAAAGAGAAAAATCGCCTGCGCACACTTGTGGGCCAGGTAGTTGGCGAGTCCCACTTCAGTCTGTCAAAGGAGGATGTTGAAACAGTATGCACATCACATGATTTTGAACAGTTGAAGAAACTCTGTGATATTATGGAGGACAAGGATACAGCTGAAAAGGCCAGGTTGCTGAGAGGTGCACTGAGCAAAGAAGAAAACTCCTCGAATACCTCAAAAGAAGAGAAAATTCATGCCAATGGTGTGGCAGATTCTACTCCAAAATCCACTGTCCCACAAGGCACTCCAAAATCCACAGCCCCACAAGTCATTACACTAGGCAACAATGAGAAAAAAGAGAAAGAGTGGGGAAAGGAAGAGGTTGAATTGCTTAGGAAAGCTACACAGAAGTATCCGAAGGGAACTAACAAGAGGTGGGAGGTTATTGCAGAGTTTATTGGTACTGGTAGATCTGTTGACGAGATTTTGAAGGCCACGAAAACCGTTCTTCTGCAGAAGCCAGACTCTTCTAAAGCTTTTAACTCGTTCCTTGAGAAACGCAAAGCAGCTCCATCTATTGTATCGCCTCTTTCCACAAGAGATGAGACGGCTGGTGGCTCAACTGTGGGAGCTGGCACCGAACCATCCAAGGCCGCTGAACAACCTGCTGCCAGCAGCAGTCAGACTGCTAATGAGAAAACTGGTGCTGATCCTGTCCCTGAAGAAGCACCTTCTGCAACAGATCCAGATGCTTGGTCAGAGGCCCAGGTGCTGGCCCTTGTTCAAGCTTTGAAGGCATTTCCAAAGGATGCAAACCAAAGATGGGAGCGAGTAGCTGCTGCTGTCCCTGGTAAAACAGTGGTGCAGTGCAAGAAAAAGGTTGCGTCAATGAGGTCGAACTTCCGGACCAAGAAAGCGGAGTAG
Protein Sequence:
- >EMT32359|Aegilops_tauschii|MYB|EMT32359
MTWEWLSFSFAGVVSFELPTCGIALNEQFSRNLGAYARELRPSSWENQEGEVELAPSKYEPAGHSFHAVALKLRGLDEKEDTETDDRSVSSDDKSQDFSAGSDNFSSKGKKKSGSGSQQQDHYALLGLGNLRFLATEDQIRKSYRDMALKHHPDKQAALLLHETTEAAKQAKKDEIESHFKAIQEAYEVLMDPTKRRIFDSTDEFDDDIPTDCAPQDFFKVFGPAFMRNGRWSVTQPIPSLGDDATPVVDVDQFYNFWYNFKSWREFPHEDEYDLEQAESREHKRWMERQNAKIQEKAKKVEYTRVRNLVDNAYRKDPRIQRRKEQEKAEKQRRKEAKYMAKKLQEEEAARAAEEERKRKEEEAKIAAAAADIRKKLKEKEKKLLRKEKNRLRTLVGQVVGESHFSLSKEDVETVCTSHDFEQLKKLCDIMEDKDTAEKARLLRGALSKEENSSNTSKEEKIHANGVADSTPKSTVPQGTPKSTAPQVITLGNNEKKEKEWGKEEVELLRKATQKYPKGTNKRWEVIAEFIGTGRSVDEILKATKTVLLQKPDSSKAFNSFLEKRKAAPSIVSPLSTRDETAGGSTVGAGTEPSKAAEQPAASSSQTANEKTGADPVPEEAPSATDPDAWSEAQVLALVQALKAFPKDANQRWERVAAAVPGKTVVQCKKKVASMRSNFRTKKAE