Gene Details:

• Gene ID: EcC054699.200
• Gene Family: MYB Family
• Description: MYB Family protein
• Species: Eucalyptus camaldulensis
• Source: MYB family gene from PlantTFDB

Protein Features:

• Gene3D:  G3DSA:1.10.10.60
• PROSITE profile:  PS51294
• SuperFamily:  SSF46689
• SMART:  SM00717
• Pfam:  PF00249
• InterPro:  IPR009057    IPR017930    IPR001005

Annotation Proteins:

• Refseq:  XP_010062698.1  — PREDICTED: myb-related protein Zm38
• TrEMBL:  A0A059BU76  — A0A059BU76_EUCGR; Uncharacterized protein
• STRING:  XP_010062698.1  — (Eucalyptus grandis)

Gene Ontology:

• GO:0000045  — Biological Process — autophagosome assembly
• GO:0000290  — Biological Process — deadenylation-dependent decapping of nuclear-transcribed mRNA
• GO:0006090  — Biological Process — pyruvate metabolic process
• GO:0006352  — Biological Process — DNA-templated transcription, initiation
• GO:0006355  — Biological Process — regulation of transcription, DNA-templated
• GO:0006468  — Biological Process — protein phosphorylation
• GO:0015979  — Biological Process — photosynthesis
• GO:0016567  — Biological Process — protein ubiquitination
• GO:0031347  — Biological Process — regulation of defense response
• GO:0045087  — Biological Process — innate immune response
• GO:0055114  — Biological Process — oxidation-reduction process
• GO:0000932  — Cellular Component — cytoplasmic mRNA processing body
• GO:0005669  — Cellular Component — transcription factor TFIID complex
• GO:0009654  — Cellular Component — photosystem II oxygen evolving complex
• GO:0045254  — Cellular Component — pyruvate dehydrogenase complex
• GO:0003677  — Molecular Function — DNA binding
• GO:0003700  — Molecular Function — transcription factor activity, sequence-specific DNA binding
• GO:0003899  — Molecular Function — DNA-directed RNA polymerase activity
• GO:0004672  — Molecular Function — protein kinase activity
• GO:0004742  — Molecular Function — dihydrolipoyllysine-residue acetyltransferase activity
• GO:0004842  — Molecular Function — ubiquitin-protein transferase activity
• GO:0005524  — Molecular Function — ATP binding
• GO:0005525  — Molecular Function — GTP binding
• GO:0008270  — Molecular Function — zinc ion binding
• GO:0016491  — Molecular Function — oxidoreductase activity
• GO:0016810  — Molecular Function — hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
• GO:0046982  — Molecular Function — protein heterodimerization activity

Family Introduction:

• MYB factors represent a family of proteins that include the conserved MYB DNA-binding domain.The first MYB gene identified was the ‘oncogene’ v-Myb derived from the avian myeloblastosis virus . Evidence obtained from sequence comparisons indicates that v-Myb may have originated from a vertebrate gene, which mutated once it became part of the virus. Many vertebrates contain three genes related to v-Myb c-Myb, A-Myb and B-Myb and other similar genes have been identified in insects, plants, fungi and slime moulds. The encoded proteins are crucial to the control of proliferation and differentiation in a number of cell types, and share the conserved MYB DNA-binding domain. This domain generally comprises up to three imperfect repeats, each forming a helix-turn-helix structure of about 53 amino acids. Three regularly spaced tryptophan residues, which form a tryptophan cluster in the three-dimensional helix-turn-helix structure, are characteristic of a MYB repeat. The three repeats in c-Myb are referred to as R1, R2 and R3; and repeats from other MYB proteins are categorised according to their similarity to either R1, R2 or R3.
• In contrast to animals, plants contain a MYB-protein subfamily that is characterised by the R2R3-type MYB domain. MYB proteins can be classified into three subfamilies depending on the number of adjacent repeats in the MYB domain (one, two or three). We refer to MYB-like proteins with one repeat as ‘MYB1R factors’, with two as ‘R2R3-type MYB’ factors, and with three repeats as ‘MYB3R’ factors.

Literature:

• The R2R3-MYB gene family in Arabidopsis thaliana.   DOI:  10.1016/s1369-5266(00)00199-0 ;  PMID:  11597504

Sequences: