Information report for DCAR_015075
Gene Details
|
|
Functional Annotation
- Refseq: XP_017245557.1 — PREDICTED: myb-related protein 315-like
- TrEMBL: A0A165WPG5 — A0A165WPG5_DAUCS; Uncharacterized protein
- GO:0008152 — Biological Process — metabolic process
- GO:0003677 — Molecular Function — DNA binding
- GO:0016787 — Molecular Function — hydrolase activity
Family Introduction
- MYB factors represent a family of proteins that include the conserved MYB DNA-binding domain.The first MYB gene identified was the ‘oncogene’ v-Myb derived from the avian myeloblastosis virus . Evidence obtained from sequence comparisons indicates that v-Myb may have originated from a vertebrate gene, which mutated once it became part of the virus. Many vertebrates contain three genes related to v-Myb c-Myb, A-Myb and B-Myb and other similar genes have been identified in insects, plants, fungi and slime moulds. The encoded proteins are crucial to the control of proliferation and differentiation in a number of cell types, and share the conserved MYB DNA-binding domain. This domain generally comprises up to three imperfect repeats, each forming a helix-turn-helix structure of about 53 amino acids. Three regularly spaced tryptophan residues, which form a tryptophan cluster in the three-dimensional helix-turn-helix structure, are characteristic of a MYB repeat. The three repeats in c-Myb are referred to as R1, R2 and R3; and repeats from other MYB proteins are categorised according to their similarity to either R1, R2 or R3.
- In contrast to animals, plants contain a MYB-protein subfamily that is characterised by the R2R3-type MYB domain. MYB proteins can be classified into three subfamilies depending on the number of adjacent repeats in the MYB domain (one, two or three). We refer to MYB-like proteins with one repeat as ‘MYB1R factors’, with two as ‘R2R3-type MYB’ factors, and with three repeats as ‘MYB3R’ factors.
Literature and News
Gene Resources
Homologs
- Actinidia chinensis: Achn307261
- Cajanus cajan: C.cajan_29371
- Fragaria vesca: mrna28021.1-v1.0-hybrid
- Glycine max: Glyma.16G063700.1.p, Glyma.19G055800.1.p, Glyma.05G072600.1.p
- Juglans regia: WALNUT_00020421-RA, WALNUT_00025642-RA
- Malus domestica: MDP0000241111
- Manihot esculenta: Manes.15G155900.1.p
- Populus trichocarpa: Potri.001G336700.1
- Prunus mume: XP_016649326.1
- Prunus persica: Prupe.3G299000.3.p
- Pyrus bretschneideri: Pbr014479.1
- Vitis vinifera: GSVIVT01003966001
Sequences
CDS Sequence:
- >DCAR_015075|Daucus_carota|MYB|DCAR_015075
ATGATCAGATGTGTTCTCCTGGGCGTGAGTTGTGGTGCAAATATAGCGGACTATGTGGCTCGAAAATCTGTAGAAGCAGGAAGGATGTTGGATCCAGTCAAGGTTGTTGCACAGGTGCTGATGTATCCTTTCTTCATTGGAAGTGTTCCAACACATTCCGAGATTAGACTGGCTAATTCCTACTTTTATGACAAGCCAATGTGCATACTTGCATGGAAACTTTTTTTACCTGAAGAAGAGTTCAGTCTCGACCACCCTGCTGCTAATCCTCTTGTTCCGGATAGGGGGCCGCCACTGAAGCGCATGCCCCCTACACTCACAGTGGTAGCAGAACATGACTGGATGAGAGATCGAGCCATTGCTTACTCAGAAGAACTTCGGAAGGTGAATGTTGACGCACCAGTGCTTGAGTACAAGGATGCGGTTCATGAATTTGCTACTCTAGACATGCTCCTTAAGACACCTCAGGCCCAAGCCTGTGCAGAGGACATTGCTATCTGGGCTATGGACTGTCAGTGGCTTCCTCTTGTGCATACTCCATATTATATTGGCGATGAGAAACGCAATGTCAGTGATGTTATTATGGTGTTGATGGGTGCTGCAAGACTTCCTTTTTCCGGTGTGACTGTACCAGCAGAAAGCTATTTTGTCATTTCCTTTTCAAACAATCGCGTACAAATGGGGAGACAACCTTGCTGTGACAAAGTTGGGTTGAAGAGAGGTCCATGGACTACAGAAGAAGATTGCAAACTCATGAATTTTATCCTTGAGAATGGCATACAGTGTTGGAGAACAATCCCCAAGCTCGCAGGATTGCTAAGATGCGGAAAAAGTTGTAGATTAAGATGGATCAATTATTTGAGGCCTGATCTTAAGAGGGGGATGCTATCTGAAGCGGAACAGAATAAAATTATAGAACTCCATGCTCGTCTTGGCAACAGGTGGTCTAAGATTGCATCTCATTTTCCTGGCCGCACTGATAATGAAATCAAGAACCACTGGAACACCCATATCAAGAAAAGGCTCAAAGCTAGTGGAGTATACTCTGTGGCACACCAACAGGTTGAGCCTAGAGAGAAAGCGGAACTGATTCTTGGGACAATGCCGGAGTCCATTTTACATATTCCTGACACCGAGCCAAAAACTAATGAGATATATGAGAGACAAAATAAAATCGACATATCATCAGATGAATCCACCTTCCTCTTGAACAACTATGAAATAATGTGTGGAAGCTTGGATGTCGTATCACTGATGAACCAGGTAGCCAACACCTCTGCTTCTTACAGCCCTTCCTTCTCTGTAGAAGAATCTTCGAGCAACCCCTCAATTGGAGAATCCTCTTACACCCAAGGAGATTCTGCACAACAGTGGGGACAATCCACGGATGCCATGCTGTCGTGGGATGCTTTTAATCAATTAGAAGAAGAGCTTTTCTATTTCAGTAAGTCCATTTAG
Protein Sequence:
- >DCAR_015075|Daucus_carota|MYB|DCAR_015075
MIRCVLLGVSCGANIADYVARKSVEAGRMLDPVKVVAQVLMYPFFIGSVPTHSEIRLANSYFYDKPMCILAWKLFLPEEEFSLDHPAANPLVPDRGPPLKRMPPTLTVVAEHDWMRDRAIAYSEELRKVNVDAPVLEYKDAVHEFATLDMLLKTPQAQACAEDIAIWAMDCQWLPLVHTPYYIGDEKRNVSDVIMVLMGAARLPFSGVTVPAESYFVISFSNNRVQMGRQPCCDKVGLKRGPWTTEEDCKLMNFILENGIQCWRTIPKLAGLLRCGKSCRLRWINYLRPDLKRGMLSEAEQNKIIELHARLGNRWSKIASHFPGRTDNEIKNHWNTHIKKRLKASGVYSVAHQQVEPREKAELILGTMPESILHIPDTEPKTNEIYERQNKIDISSDESTFLLNNYEIMCGSLDVVSLMNQVANTSASYSPSFSVEESSSNPSIGESSYTQGDSAQQWGQSTDAMLSWDAFNQLEEELFYFSKSI*