Information report for Ahy016457
Gene Details
Functional Annotation
- Refseq: XP_015950003.1 — transcription factor AS1
- Refseq: XP_015950004.1 — transcription factor AS1
- Refseq: XP_025651915.1 — transcription factor AS1
- Swissprot: O80931 — AS1_ARATH; Transcription factor AS1
- TrEMBL: A0A445ECK0 — A0A445ECK0_ARAHY; Uncharacterized protein
- STRING: AES79345 — (Medicago truncatula)
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- MYB factors represent a family of proteins that include the conserved MYB DNA-binding domain.The first MYB gene identified was the ‘oncogene’ v-Myb derived from the avian myeloblastosis virus . Evidence obtained from sequence comparisons indicates that v-Myb may have originated from a vertebrate gene, which mutated once it became part of the virus. Many vertebrates contain three genes related to v-Myb c-Myb, A-Myb and B-Myb and other similar genes have been identified in insects, plants, fungi and slime moulds. The encoded proteins are crucial to the control of proliferation and differentiation in a number of cell types, and share the conserved MYB DNA-binding domain. This domain generally comprises up to three imperfect repeats, each forming a helix-turn-helix structure of about 53 amino acids. Three regularly spaced tryptophan residues, which form a tryptophan cluster in the three-dimensional helix-turn-helix structure, are characteristic of a MYB repeat. The three repeats in c-Myb are referred to as R1, R2 and R3; and repeats from other MYB proteins are categorised according to their similarity to either R1, R2 or R3.
- In contrast to animals, plants contain a MYB-protein subfamily that is characterised by the R2R3-type MYB domain. MYB proteins can be classified into three subfamilies depending on the number of adjacent repeats in the MYB domain (one, two or three). We refer to MYB-like proteins with one repeat as ‘MYB1R factors’, with two as ‘R2R3-type MYB’ factors, and with three repeats as ‘MYB3R’ factors.
Literature and News
Gene Resources
Homologs
- Cajanus cajan: C.cajan_06761
- Cicer arietinum: XP_004492355.1, XP_004492354.1, XP_004492353.1
- Glycine max: Glyma.03G081900.1.p, Glyma.03G081900
- Lotus japonicus: Lj3g3v1631860.1
- Medicago truncatula: Medtr7g061550.2, Medtr7g061550.1, Medtr7g061550
- Ziziphus jujuba: XP_015896997.1, XP_015896996.1, XP_015896995.1, XP_015896994.1, XP_015896993.1
Sequences
CDS Sequence:
- >Ahy016457|Arachis_hypogaea|MYB|gnl|UG|Ahy#S58472148;PUT-171a-Arachis_hypogaea-20497
ATGAAGGAGCGGCAACGTTGGAGAGCTGAAGAAGATGCTTTGTTACGAGCTTATGTCAAACAGTATGGTCCAAGGGAATGGAATCTTGTGTCGCAGCGCATGAACACGCCTCTTAACCGGGATGCGAAGTCATGCTTAGAAAGGTGGAAGAATTACCTTAAGCCAGGCATTAAGAAAGGATCTCTCACTGAAGAAGAGCAGCGTCTTGTGATCCGCCTCCAAGCGAAATACGGAAACAAATGGAAGAAAATTGCGGCCGAAGTCCCCGGTCGGACTGCTAAGAGATTAGGCAAGTGGTGGGAAGTGTTCAAAGAGAAACAGCTAAGACAGAAAAAGGAGATTAACAGAATTACCGAACCAATTAACGATAGCAAGTACGAGCACATACTAGAGAGTTTCGCCGAGAAGCTAGTTAAGGACAGCCCTTCGCCTTCGTTTGTTATGGCTTCTTCCAACGGGCCATTTCTTCATGCCGATGCACCGGCCCCTGCATCCCCTGTGCTTCCTTCTTGGCTTTCCAATTCTCATAGTCATAGTGCTACAACCGGCCCTCCGAATTCACCATCCGTGACACTAAGTCTTTCCTCACCAACCGTGGCAGCACCACCATTTCCGTGGATGCAACCGGAGCGAGCACCGGATAATGCTTCTTTTGCTTTAGGCAATGTGCCTCTTTGTGGACCTTTTCCGGCTTCTGGTGATAACATGCTGATATCTGAGTTGGTGGAGTGCTGCAAAGAGCTGGAAGAAACACATCATGCTTTGGCCGCGCATAAGAAAGAGGCAGCCTGGAGGTTAAGAAGGGTGGAGTTGCAGTTGGAGTCGGAGAAGGCAAGTCGAAGGAGGGAGAAGATGGAAGAAATCGAAGCGAAGATTAAAGCCCTCGAGGAAGAGCAGAAGGCTGCTTTGAGTAGAATTGAAGCTGAGTACAGGGAACAGTTAGCCGGATTAAGGAGGGATGCCGAGACCAAGGAGCAGAAGTTGGCCGAACAATGGGCGGCGAAGCACTTGCGGCTTCTCGGTTTCTGGAACAAGCAGGATGCAAACTGGGGCTCCCTGAGCAACATGGAAGATGAAGACACACATCACCACCTTAGTAAGTCAGATATGCTTGCTCTTATGACTTGA
Protein Sequence:
- >Ahy016457|Arachis_hypogaea|MYB|gnl|UG|Ahy#S58472148;PUT-171a-Arachis_hypogaea-20497
MKERQRWRAEEDALLRAYVKQYGPREWNLVSQRMNTPLNRDAKSCLERWKNYLKPGIKKGSLTEEEQRLVIRLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLRQKKEINRITEPINDSKYEHILESFAEKLVKDSPSPSFVMASSNGPFLHADAPAPASPVLPSWLSNSHSHSATTGPPNSPSVTLSLSSPTVAAPPFPWMQPERAPDNASFALGNVPLCGPFPASGDNMLISELVECCKELEETHHALAAHKKEAAWRLRRVELQLESEKASRRREKMEEIEAKIKALEEEQKAALSRIEAEYREQLAGLRRDAETKEQKLAEQWAAKHLRLLGFWNKQDANWGSLSNMEDEDTHHHLSKSDMLALMT